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The map label for this gene is betI [H]

Identifier: 23501443

GI number: 23501443

Start: 550548

End: 551144

Strand: Reverse

Name: betI [H]

Synonym: BR0554

Alternate gene names: 23501443

Gene position: 551144-550548 (Counterclockwise)

Preceding gene: 23501446

Following gene: 23501442

Centisome position: 26.15

GC content: 58.96

Gene sequence:

>597_bases
ATGCCCAAGATCGGGATGGAACCCTTGCGGCGGCGCGAATTGATTGATGCTGCCATCCGCACCATCGGACAGCGCGGATC
GCTGGATGTGACCGTTGCGCAAATTGCCCATGAAGCAGGCGTTTCGCCTGCGCTTGCACATCATTATTTCGGCGGCAAGG
ACAAGCTTATCCTCGCCACCATGCGCCATCTGCTGCGCGAACTGGGCCGCGATCTCAACGCGGCGATCAAACAGGCCAAC
GCACCGCATGAGCGCATCGCGGCAATCATCGCCGTGAATTTTTCCGCCGCGCAATTTGCACAGGAAACGATTGCCGCCTG
GCTGACCTTCTATGTCCATGCCCAGCAATCGGACGACATAAAGCGGCTTTTGCGCATCTATGCGCGCCGCCTGCATTCCA
ATCTGGTTTTCGCGCTTGAGCAGCTCACAAGCCGCGCACGGGCAAACCGCATAGCCGAGGGCGCTGGCGCCATGATCGAC
GGGCTTTATATCCGTCATGCGCTCGGGGCCGACGCACCCGATGCGGCCTCAGCGATTGCATTGGTGGAAGACTATATCGC
CATTCAACTTTCAGGACAGCCTTCGGCGGAGAATTGA

Upstream 100 bases:

>100_bases
CACTTGCAGGGGGCGGGGTTTTCAATGGCGGGTTTTTGTTGATTGACCAGTCAATCAAAGATAAAATGCCCGCAATAAGC
CAGACAACCGGATGAACATC

Downstream 100 bases:

>100_bases
GCATGGAAGCAGATTTCGTCATCATCGGCTCCGGCTCTGCCGGTTCGGCCATGGCCTATCGCCTTTCAGAAAACGGGCGC
TATTCGGTGATCGTCATCGA

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MPKIGMEPLRRRELIDAAIRTIGQRGSLDVTVAQIAHEAGVSPALAHHYFGGKDKLILATMRHLLRELGRDLNAAIKQAN
APHERIAAIIAVNFSAAQFAQETIAAWLTFYVHAQQSDDIKRLLRIYARRLHSNLVFALEQLTSRARANRIAEGAGAMID
GLYIRHALGADAPDAASAIALVEDYIAIQLSGQPSAEN

Sequences:

>Translated_198_residues
MPKIGMEPLRRRELIDAAIRTIGQRGSLDVTVAQIAHEAGVSPALAHHYFGGKDKLILATMRHLLRELGRDLNAAIKQAN
APHERIAAIIAVNFSAAQFAQETIAAWLTFYVHAQQSDDIKRLLRIYARRLHSNLVFALEQLTSRARANRIAEGAGAMID
GLYIRHALGADAPDAASAIALVEDYIAIQLSGQPSAEN
>Mature_197_residues
PKIGMEPLRRRELIDAAIRTIGQRGSLDVTVAQIAHEAGVSPALAHHYFGGKDKLILATMRHLLRELGRDLNAAIKQANA
PHERIAAIIAVNFSAAQFAQETIAAWLTFYVHAQQSDDIKRLLRIYARRLHSNLVFALEQLTSRARANRIAEGAGAMIDG
LYIRHALGADAPDAASAIALVEDYIAIQLSGQPSAEN

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=194, Percent_Identity=39.1752577319588, Blast_Score=124, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21590; Mature: 21459

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIGMEPLRRRELIDAAIRTIGQRGSLDVTVAQIAHEAGVSPALAHHYFGGKDKLILAT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHH
MRHLLRELGRDLNAAIKQANAPHERIAAIIAVNFSAAQFAQETIAAWLTFYVHAQQSDDI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
KRLLRIYARRLHSNLVFALEQLTSRARANRIAEGAGAMIDGLYIRHALGADAPDAASAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LVEDYIAIQLSGQPSAEN
HHHHHHEEEECCCCCCCC
>Mature Secondary Structure 
PKIGMEPLRRRELIDAAIRTIGQRGSLDVTVAQIAHEAGVSPALAHHYFGGKDKLILAT
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHH
MRHLLRELGRDLNAAIKQANAPHERIAAIIAVNFSAAQFAQETIAAWLTFYVHAQQSDDI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
KRLLRIYARRLHSNLVFALEQLTSRARANRIAEGAGAMIDGLYIRHALGADAPDAASAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LVEDYIAIQLSGQPSAEN
HHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA