| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
Click here to switch to the map view.
The map label for this gene is artJ [H]
Identifier: 23501202
GI number: 23501202
Start: 306203
End: 307045
Strand: Reverse
Name: artJ [H]
Synonym: BR0295
Alternate gene names: 23501202
Gene position: 307045-306203 (Counterclockwise)
Preceding gene: 23501204
Following gene: 23501201
Centisome position: 14.57
GC content: 58.13
Gene sequence:
>843_bases ATGAAATCCTGTCTGTTGAGCCTGACGATAAGCATGTGCCTTTTCGCTCCTGCCGCCCATGCGGCGGGGGAAGAACCGGC TGCACCGCATTTCTTCAACCAGAAAGAGCGCCTGCCCCTGCCTTCGCTGCAAGGGCTCAATCGTCTGCGCTTCATCACCA CCGTCGATTTTCCGCCATTCAACAGGCTTAACGAACGCGGGCAGCTTTCCGGCTACAACATTGATCTGGCCAAGGCGCTT TGCCAGCAGCTCAAGATCGAGGACATCTGCCAGATCGAGGCGGTGCCGTGGGCGGAACTGGAAGAGCGTGTGCTGGATGG ACAGGCGGACGCGATCGTTGCGGGGTGGGAACCGACCGACAGGAACCGGGAAAAATTCACCTTCACCCGCAGCTATATGC GCCTGCCCGCACGCTTTGCGACCTCCAATGCCAAAAGCTTTACAGAACCCGCTGCAAAGGCGACGCAGGACAAGCCCGTC GGCGTGATTGCCGGGACGGCGCATGAAGCGCTTTTGAAGAACTATTTCCCACAGGCAAAACCCGTGCCCTACCCCAATCG CGATGCCATGCTGACCGCATTGAAGGACGGCAAGATCGACACGGTTTTCGATGACGGCATGTCCCTCTCGGCCTGGCTCG ACAGCGCAGAAGGCAGCGCCTGTTGTACTTTCACGGACGGGCCCTATCTGGCGCCTCAATATCTGGGTTCCGGCCTCAGC ATCGCTGTTACCCGGCAAAATTCCGCCCTGGCAAGCGCCTTCAACAATGCCCTGCAAGCCCTGCAACAAGAAGGTAAGCT GACCGAGCTTTACCTGAGATATTTCCCGGCAAGCTTTTATTAG
Upstream 100 bases:
>100_bases ATATACGAATTATCAGGATGCCCGTTACTGCTATCGCCGATGGCGCTTGCATAGGCGCCGTTAACCCGGAATTATGGGGA ATATTATAGGGTCGCCGGCG
Downstream 100 bases:
>100_bases AGCATTTCCAGCCCCGCCTCGCACCCGCAAAGCACATAGCGGCGTCCACGGCCCGCACATGTGCGATTTTGACGCACTTT AGCGAAATTCCGGCTGAAAC
Product: amino acid ABC transporter periplasmic amino acid-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPFNRLNERGQLSGYNIDLAKAL CQQLKIEDICQIEAVPWAELEERVLDGQADAIVAGWEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPV GVIAGTAHEALLKNYFPQAKPVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQYLGSGLS IAVTRQNSALASAFNNALQALQQEGKLTELYLRYFPASFY
Sequences:
>Translated_280_residues MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPFNRLNERGQLSGYNIDLAKAL CQQLKIEDICQIEAVPWAELEERVLDGQADAIVAGWEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPV GVIAGTAHEALLKNYFPQAKPVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQYLGSGLS IAVTRQNSALASAFNNALQALQQEGKLTELYLRYFPASFY >Mature_280_residues MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPFNRLNERGQLSGYNIDLAKAL CQQLKIEDICQIEAVPWAELEERVLDGQADAIVAGWEPTDRNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPV GVIAGTAHEALLKNYFPQAKPVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQYLGSGLS IAVTRQNSALASAFNNALQALQQEGKLTELYLRYFPASFY
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=231, Percent_Identity=30.7359307359307, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1787088, Length=235, Percent_Identity=28.5106382978723, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788649, Length=234, Percent_Identity=23.0769230769231, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=22.4215246636771, Blast_Score=64, Evalue=9e-12,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30853; Mature: 30853
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCC NRLNERGQLSGYNIDLAKALCQQLKIEDICQIEAVPWAELEERVLDGQADAIVAGWEPTD HHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCC RNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFPQAK CCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCC PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQYLGSGLS CCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCEEEEECCCCEECHHHHCCCCE IAVTRQNSALASAFNNALQALQQEGKLTELYLRYFPASFY EEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MKSCLLSLTISMCLFAPAAHAAGEEPAAPHFFNQKERLPLPSLQGLNRLRFITTVDFPPF CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCC NRLNERGQLSGYNIDLAKALCQQLKIEDICQIEAVPWAELEERVLDGQADAIVAGWEPTD HHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCC RNREKFTFTRSYMRLPARFATSNAKSFTEPAAKATQDKPVGVIAGTAHEALLKNYFPQAK CCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCC PVPYPNRDAMLTALKDGKIDTVFDDGMSLSAWLDSAEGSACCTFTDGPYLAPQYLGSGLS CCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCEEEEECCCCEECHHHHCCCCE IAVTRQNSALASAFNNALQALQQEGKLTELYLRYFPASFY EEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]