| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is 23501140
Identifier: 23501140
GI number: 23501140
Start: 245265
End: 246113
Strand: Reverse
Name: 23501140
Synonym: BR0233
Alternate gene names: NA
Gene position: 246113-245265 (Counterclockwise)
Preceding gene: 23501141
Following gene: 23501134
Centisome position: 11.68
GC content: 59.84
Gene sequence:
>849_bases ATGCTGATCGATACGCACCTGCACCTGATCGACAAAAACGCGCTCAGCTATCCGTGGCTTGAGAGCGCGCCTGCGCTCAA CCGCGATTTCCTTTTCGACAGCTATCGTCTTCAGGCCGAGCGTGCCGGCATTGGCGGCGCTCTTCACATAGAAGTTGACG TTGCGCCGCACGCCATGCAGGCGGAGACCGACCATATAAGGCAAATCGCCCGCCGATCGGGCGGGTTCATCAAGGGAGCG ATCGCGTCATGCCGCCCGGAGGAACCGGGCTTTGCCGCCTATCTGGAACGCCAGCTAAGCGATCCTTTCGTGAAAGGGCT ACGCCGCGTGTTGCATGTGGTGCCGGATGAAGTTTCCGAAGGGGCGCTGTTTCGCGAAAACATCAAGAGGCTGGAAGGAA CCGGCCTTACCTTTGATCTTTGTGTGCAGCCGCACCAGATCGGCAAGGCCATTGCGCTTGCCGATCTGGCACCCGACCTT TGCTTCATTGTCGACCATTGCAGCGCGCCGGACATCAAGGCCGGTGCCCTCGACGGCTGGCGGGAAGGCATGGCTGAAAT TTCCCGGCGCCCCAACGTGATAGCCAAGATTTCCGGCCTGGTGGTCTATTGCGATGCGGAAAGCTGGACTGTCGAGACCT TGCGCCCCTATGCGGAACAGGTGATCCAGTCCTTCGGGTGGGACCGCGTCATATGGGGCAGCGACTGGCCTGTCTGCACA CTTGCCAGTTCACCCGACGCAGGGCTTTCGACATGGGTGGCGGCCACCCATGCCCTGCTTGAAGGATGCAGCACCACGGA AAAATCGCGCCTTTTTTGCGAAAATGCGCGCCGCATCTGGAATCTATGA
Upstream 100 bases:
>100_bases CCTCTCCAAGCTGGTGGGCGCGGATGTAGGCGTGACAGGATAAATTCTGATTTGAAAAATATCTTCTTTTTTGAAAGCAT CGAAAGCAAGGAGGATTCCC
Downstream 100 bases:
>100_bases AAAACAGGCGCGCAAAGGCCGGCTCCGACACGGGACCGGCAGGCAAGGCGCATCAGATGGAAAGCTCCACCTCGCGGCTT GCGGTTTCCAACAGGGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLIDTHLHLIDKNALSYPWLESAPALNRDFLFDSYRLQAERAGIGGALHIEVDVAPHAMQAETDHIRQIARRSGGFIKGA IASCRPEEPGFAAYLERQLSDPFVKGLRRVLHVVPDEVSEGALFRENIKRLEGTGLTFDLCVQPHQIGKAIALADLAPDL CFIVDHCSAPDIKAGALDGWREGMAEISRRPNVIAKISGLVVYCDAESWTVETLRPYAEQVIQSFGWDRVIWGSDWPVCT LASSPDAGLSTWVAATHALLEGCSTTEKSRLFCENARRIWNL
Sequences:
>Translated_282_residues MLIDTHLHLIDKNALSYPWLESAPALNRDFLFDSYRLQAERAGIGGALHIEVDVAPHAMQAETDHIRQIARRSGGFIKGA IASCRPEEPGFAAYLERQLSDPFVKGLRRVLHVVPDEVSEGALFRENIKRLEGTGLTFDLCVQPHQIGKAIALADLAPDL CFIVDHCSAPDIKAGALDGWREGMAEISRRPNVIAKISGLVVYCDAESWTVETLRPYAEQVIQSFGWDRVIWGSDWPVCT LASSPDAGLSTWVAATHALLEGCSTTEKSRLFCENARRIWNL >Mature_282_residues MLIDTHLHLIDKNALSYPWLESAPALNRDFLFDSYRLQAERAGIGGALHIEVDVAPHAMQAETDHIRQIARRSGGFIKGA IASCRPEEPGFAAYLERQLSDPFVKGLRRVLHVVPDEVSEGALFRENIKRLEGTGLTFDLCVQPHQIGKAIALADLAPDL CFIVDHCSAPDIKAGALDGWREGMAEISRRPNVIAKISGLVVYCDAESWTVETLRPYAEQVIQSFGWDRVIWGSDWPVCT LASSPDAGLSTWVAATHALLEGCSTTEKSRLFCENARRIWNL
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 31204; Mature: 31204
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDTHLHLIDKNALSYPWLESAPALNRDFLFDSYRLQAERAGIGGALHIEVDVAPHAMQ CEEECEEHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH AETDHIRQIARRSGGFIKGAIASCRPEEPGFAAYLERQLSDPFVKGLRRVLHVVPDEVSE CCHHHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC GALFRENIKRLEGTGLTFDLCVQPHQIGKAIALADLAPDLCFIVDHCSAPDIKAGALDGW CHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHH REGMAEISRRPNVIAKISGLVVYCDAESWTVETLRPYAEQVIQSFGWDRVIWGSDWPVCT HHHHHHHHHCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEE LASSPDAGLSTWVAATHALLEGCSTTEKSRLFCENARRIWNL ECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLIDTHLHLIDKNALSYPWLESAPALNRDFLFDSYRLQAERAGIGGALHIEVDVAPHAMQ CEEECEEHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH AETDHIRQIARRSGGFIKGAIASCRPEEPGFAAYLERQLSDPFVKGLRRVLHVVPDEVSE CCHHHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC GALFRENIKRLEGTGLTFDLCVQPHQIGKAIALADLAPDLCFIVDHCSAPDIKAGALDGW CHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHH REGMAEISRRPNVIAKISGLVVYCDAESWTVETLRPYAEQVIQSFGWDRVIWGSDWPVCT HHHHHHHHHCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEE LASSPDAGLSTWVAATHALLEGCSTTEKSRLFCENARRIWNL ECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]