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The map label for this gene is bioC [C]

Identifier: 23501028

GI number: 23501028

Start: 125196

End: 125984

Strand: Reverse

Name: bioC [C]

Synonym: BR0114

Alternate gene names: 23501028

Gene position: 125984-125196 (Counterclockwise)

Preceding gene: 23501029

Following gene: 23501027

Centisome position: 5.98

GC content: 55.77

Gene sequence:

>789_bases
ATGGCCCAGAATATTTATGATCGCGACGACTTCTTCACCGCTTACAGCCAGTTGCCGCGCTCGGTACACGGGCTGGAAGG
TGCACCCGAATGGCCTGTGGTCCGCTCGCTTCTGCCCGATCTGACCGGCCGTGACATTGCCGATCTTGGATGCGGCTTCG
GCTGGTTTTGCCGCTTTGCCCGCGAACAGGGGGCTGCCTCCGTTACCGGTTATGATCTTTCGCAAAATATGCTGGAACGC
GCGCGCCGCGACACACAGGATGATGCCGTTTGCTATATTCAGGCAGACATGGAAAGGCTGGAGCTTCCAGAAGCAAGCTT
TGATCTTGTCTACAGTTCCCTGGCCTTTCACTATATCCGTGACTTTCCGCGTATTTTGAAAACGATCCATGCCGCCTTGC
GGCCGGACGGCCGCTTTGTTTTCACGATCGAACATCCGATCTTCATGGCGTCACTTGCGCCTGGCTGGATAGAAGAAGGC
AATGGCCAAAAGCGATGGCCGGTCGATCATTATGCCGTAGAAGGTGAGCGGCAAACCGACTGGCTGGCAGAAGGCGTCAT
CAAATATCACCGCCGTCTCAGCACCACAGTCAACGCATTGATTGAGGCCGGATTTGCCATCAACCGGCTGGAGGAATGGT
ATCCATCGCCAGAGCAGATCGCGGCATGGCCGGCGCTGTCGGAGGAAATGGAGCGACCTATGCTGTTGTTGGTTTCCGCC
AGTGTGGTGGATTTGAATCCAAAGTCCGTTCACGGCGCTGCTCCTGGAGCATTTCCAGCAAAAATGTGA

Upstream 100 bases:

>100_bases
CTCGGGGTACGGGCTGCTGCCGTGACCGTCTCGCGCGCAGGTGCGAACCCGCCATGGGCGCATGAGATGCGGGATTGACG
CACGAAACGAACGATAGGTC

Downstream 100 bases:

>100_bases
AGCTGTTTTGGCCCGAAAATGCTCTGGCTGACAGACGGCTTGACCAGCCACATTTCACGTCTTTTATTGAGGTGGGCGAG
GCACGAATCGAACGGGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MAQNIYDRDDFFTAYSQLPRSVHGLEGAPEWPVVRSLLPDLTGRDIADLGCGFGWFCRFAREQGAASVTGYDLSQNMLER
ARRDTQDDAVCYIQADMERLELPEASFDLVYSSLAFHYIRDFPRILKTIHAALRPDGRFVFTIEHPIFMASLAPGWIEEG
NGQKRWPVDHYAVEGERQTDWLAEGVIKYHRRLSTTVNALIEAGFAINRLEEWYPSPEQIAAWPALSEEMERPMLLLVSA
SVVDLNPKSVHGAAPGAFPAKM

Sequences:

>Translated_262_residues
MAQNIYDRDDFFTAYSQLPRSVHGLEGAPEWPVVRSLLPDLTGRDIADLGCGFGWFCRFAREQGAASVTGYDLSQNMLER
ARRDTQDDAVCYIQADMERLELPEASFDLVYSSLAFHYIRDFPRILKTIHAALRPDGRFVFTIEHPIFMASLAPGWIEEG
NGQKRWPVDHYAVEGERQTDWLAEGVIKYHRRLSTTVNALIEAGFAINRLEEWYPSPEQIAAWPALSEEMERPMLLLVSA
SVVDLNPKSVHGAAPGAFPAKM
>Mature_261_residues
AQNIYDRDDFFTAYSQLPRSVHGLEGAPEWPVVRSLLPDLTGRDIADLGCGFGWFCRFAREQGAASVTGYDLSQNMLERA
RRDTQDDAVCYIQADMERLELPEASFDLVYSSLAFHYIRDFPRILKTIHAALRPDGRFVFTIEHPIFMASLAPGWIEEGN
GQKRWPVDHYAVEGERQTDWLAEGVIKYHRRLSTTVNALIEAGFAINRLEEWYPSPEQIAAWPALSEEMERPMLLLVSAS
VVDLNPKSVHGAAPGAFPAKM

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=93, Percent_Identity=37.6344086021505, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1786994, Length=107, Percent_Identity=38.3177570093458, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29605; Mature: 29474

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNIYDRDDFFTAYSQLPRSVHGLEGAPEWPVVRSLLPDLTGRDIADLGCGFGWFCRFA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHH
REQGAASVTGYDLSQNMLERARRDTQDDAVCYIQADMERLELPEASFDLVYSSLAFHYIR
HHCCCCEECCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHH
DFPRILKTIHAALRPDGRFVFTIEHPIFMASLAPGWIEEGNGQKRWPVDHYAVEGERQTD
HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCHHCCCCCCCCCCCHHHEECCCCHHH
WLAEGVIKYHRRLSTTVNALIEAGFAINRLEEWYPSPEQIAAWPALSEEMERPMLLLVSA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCHHHHHHCCCEEEEEEC
SVVDLNPKSVHGAAPGAFPAKM
CEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQNIYDRDDFFTAYSQLPRSVHGLEGAPEWPVVRSLLPDLTGRDIADLGCGFGWFCRFA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHH
REQGAASVTGYDLSQNMLERARRDTQDDAVCYIQADMERLELPEASFDLVYSSLAFHYIR
HHCCCCEECCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHH
DFPRILKTIHAALRPDGRFVFTIEHPIFMASLAPGWIEEGNGQKRWPVDHYAVEGERQTD
HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCHHCCCCCCCCCCCHHHEECCCCHHH
WLAEGVIKYHRRLSTTVNALIEAGFAINRLEEWYPSPEQIAAWPALSEEMERPMLLLVSA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCHHHHHHCCCEEEEEEC
SVVDLNPKSVHGAAPGAFPAKM
CEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]