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The map label for this gene is yurM [H]

Identifier: 23100927

GI number: 23100927

Start: 3607543

End: 3608364

Strand: Reverse

Name: yurM [H]

Synonym: OB3472

Alternate gene names: 23100927

Gene position: 3608364-3607543 (Counterclockwise)

Preceding gene: 23100928

Following gene: 23100926

Centisome position: 99.39

GC content: 36.25

Gene sequence:

>822_bases
ATGAAAAAAAGAGGCACCGTCGGTTTTTATATATTCTTAGTAATTTTTGTGTTTTTAGTGATGTTTCCATTTATTTGGGT
TTTCTTAACCTCAATAAAACCAGTTAATGAAATTTTTTCCTCATTTAAATGGTTTACTAGTAATCCAACATTATCATCCT
ATGAAGCTGCATTAACAAATCGTCCATTACTAAGATACATGTTAAATAGTTTTGTGGTCTCCTTGCTAACGACGGTATTA
TCACTAACCTTCGCAGCATTTACGGCTTATGCCGTTACAAGACTACCAATCAAAGGAAAAGGATTAATCTTAGGCTTGGT
TTTAGCTGCATCGATGTTTCCTCAGATTGCAATCATATCACCGATGTTTAACTTAGTAACAAATCTTGGTTTAAGAAACA
GTTATCTAGGGTTAATTATTCCATATATCACCATTAGTTTACCGTTAGCGATATGGATTCTTTCTACTTTCTTTAAGAAA
ATCCCGTATGAATTGGAAGAGTCTGCGAAACTAGATGGAGCTAGTCCGTTTCAGACGTTTCGAAAAATCATCTTACCTCT
TGCAACACCAGGTATATTTACTACGGGAATTCTCGTATTTATCGCTGCGTGGAATGAATATCTTTTTGCGTTAACGATTA
ATAGTGATGACCAGTGGCGAACAGTACCTGTTGGGATTTCTATGTACCAAAGTGAATTCTCCATTCCTTGGGGGGATATT
TCTGCGGCCACGGTTATTGTAACAATACCCATTGTAGTACTTGTGCTGATATTCCAGCGTAGAATTGTTTCGGGATTAAC
GTCAGGGTCTGTAAAGGAATAA

Upstream 100 bases:

>100_bases
GTCATCGTTTTCCTATTTGTAGCGATTATTAGTTTCATTTATGTCAAATTAATTGGATCCGACTTGTTTGCAGGTAGAAC
GAAGTGAGGAGGAGAATAGC

Downstream 100 bases:

>100_bases
AAACAGAAGGAGATGGATGTAACATGACTAGAACCATTCAAGTAGGGATTATTGGTTGTGGTGGTATTGCTTTTGGAAAG
CATTTACCAAGTTTATCAAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKKRGTVGFYIFLVIFVFLVMFPFIWVFLTSIKPVNEIFSSFKWFTSNPTLSSYEAALTNRPLLRYMLNSFVVSLLTTVL
SLTFAAFTAYAVTRLPIKGKGLILGLVLAASMFPQIAIISPMFNLVTNLGLRNSYLGLIIPYITISLPLAIWILSTFFKK
IPYELEESAKLDGASPFQTFRKIILPLATPGIFTTGILVFIAAWNEYLFALTINSDDQWRTVPVGISMYQSEFSIPWGDI
SAATVIVTIPIVVLVLIFQRRIVSGLTSGSVKE

Sequences:

>Translated_273_residues
MKKRGTVGFYIFLVIFVFLVMFPFIWVFLTSIKPVNEIFSSFKWFTSNPTLSSYEAALTNRPLLRYMLNSFVVSLLTTVL
SLTFAAFTAYAVTRLPIKGKGLILGLVLAASMFPQIAIISPMFNLVTNLGLRNSYLGLIIPYITISLPLAIWILSTFFKK
IPYELEESAKLDGASPFQTFRKIILPLATPGIFTTGILVFIAAWNEYLFALTINSDDQWRTVPVGISMYQSEFSIPWGDI
SAATVIVTIPIVVLVLIFQRRIVSGLTSGSVKE
>Mature_273_residues
MKKRGTVGFYIFLVIFVFLVMFPFIWVFLTSIKPVNEIFSSFKWFTSNPTLSSYEAALTNRPLLRYMLNSFVVSLLTTVL
SLTFAAFTAYAVTRLPIKGKGLILGLVLAASMFPQIAIISPMFNLVTNLGLRNSYLGLIIPYITISLPLAIWILSTFFKK
IPYELEESAKLDGASPFQTFRKIILPLATPGIFTTGILVFIAAWNEYLFALTINSDDQWRTVPVGISMYQSEFSIPWGDI
SAATVIVTIPIVVLVLIFQRRIVSGLTSGSVKE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=275, Percent_Identity=33.8181818181818, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1790464, Length=276, Percent_Identity=30.7971014492754, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1789860, Length=211, Percent_Identity=31.2796208530806, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1787368, Length=153, Percent_Identity=27.4509803921569, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30496; Mature: 30496

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRGTVGFYIFLVIFVFLVMFPFIWVFLTSIKPVNEIFSSFKWFTSNPTLSSYEAALTN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHCC
RPLLRYMLNSFVVSLLTTVLSLTFAAFTAYAVTRLPIKGKGLILGLVLAASMFPQIAIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
PMFNLVTNLGLRNSYLGLIIPYITISLPLAIWILSTFFKKIPYELEESAKLDGASPFQTF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHH
RKIILPLATPGIFTTGILVFIAAWNEYLFALTINSDDQWRTVPVGISMYQSEFSIPWGDI
HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCH
SAATVIVTIPIVVLVLIFQRRIVSGLTSGSVKE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKRGTVGFYIFLVIFVFLVMFPFIWVFLTSIKPVNEIFSSFKWFTSNPTLSSYEAALTN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHCC
RPLLRYMLNSFVVSLLTTVLSLTFAAFTAYAVTRLPIKGKGLILGLVLAASMFPQIAIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
PMFNLVTNLGLRNSYLGLIIPYITISLPLAIWILSTFFKKIPYELEESAKLDGASPFQTF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHH
RKIILPLATPGIFTTGILVFIAAWNEYLFALTINSDDQWRTVPVGISMYQSEFSIPWGDI
HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCH
SAATVIVTIPIVVLVLIFQRRIVSGLTSGSVKE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]