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The map label for this gene is padR [H]

Identifier: 23100683

GI number: 23100683

Start: 3364313

End: 3364876

Strand: Direct

Name: padR [H]

Synonym: OB3228

Alternate gene names: 23100683

Gene position: 3364313-3364876 (Clockwise)

Preceding gene: 23100681

Following gene: 23100684

Centisome position: 92.67

GC content: 34.75

Gene sequence:

>564_bases
ATGAAAACGTATAACGATACCACCTATGCAATTTTAGGTATTTTAACAACAGATTGTACATCAGGATATGACATTAAAAA
ACTAATTGATCAGAGCCTAAATCATTTTTGGAAGATTAGCTATGGACAGATTTATCCCACGTTAAAGTTACTAGTGGAGG
AAGAACTCGCGGAAGTTGCACCGTCTTCAGAAGGCGGAAGAAAAGAAAGAAATGAATATTCACTAACTGAAAAAGGAGTA
AGCACACTAAAAGCATGGTTAGAAGAACCTGTTCAACAGTTACCAGTGGAGAAAAACGAAATTTTACTTAAATTATTTTT
CGGGAATCACCAATCAAATCAAGCGAGCATTCGTCTTATTGAAGATTACAGAACAAAGCTAGAAACACGTTATCAAACCT
ATACAGCAATTGAAAAATCTATTCAAGAACATGAATCAGCTTCCAAAGACGCAAAGTATTGGCTGTACACATTAGATTAT
GGAAAAAGAACAACAAAAGCCGCCATCAATTGGTGTGAAGCAACCATCAAAAATATCACAGAAGGAGAAGATATATATGA
GTAA

Upstream 100 bases:

>100_bases
AAAATTATCTGAATTTATGTTGACTAAAGTGAGGCGTGTAGTATAGTTAATATATCAAAAAGATATATCTAATTGATATA
AAGAAAGGTTGGAACTAAAA

Downstream 100 bases:

>100_bases
AGCGATTTATACGGGTGGATACACGACGGAAAACTCTGAAGAAATAGTAGTTTTTATCATCGGAATGCGCATTAACAAGT
ATATTGCTATTCATAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKTYNDTTYAILGILTTDCTSGYDIKKLIDQSLNHFWKISYGQIYPTLKLLVEEELAEVAPSSEGGRKERNEYSLTEKGV
STLKAWLEEPVQQLPVEKNEILLKLFFGNHQSNQASIRLIEDYRTKLETRYQTYTAIEKSIQEHESASKDAKYWLYTLDY
GKRTTKAAINWCEATIKNITEGEDIYE

Sequences:

>Translated_187_residues
MKTYNDTTYAILGILTTDCTSGYDIKKLIDQSLNHFWKISYGQIYPTLKLLVEEELAEVAPSSEGGRKERNEYSLTEKGV
STLKAWLEEPVQQLPVEKNEILLKLFFGNHQSNQASIRLIEDYRTKLETRYQTYTAIEKSIQEHESASKDAKYWLYTLDY
GKRTTKAAINWCEATIKNITEGEDIYE
>Mature_187_residues
MKTYNDTTYAILGILTTDCTSGYDIKKLIDQSLNHFWKISYGQIYPTLKLLVEEELAEVAPSSEGGRKERNEYSLTEKGV
STLKAWLEEPVQQLPVEKNEILLKLFFGNHQSNQASIRLIEDYRTKLETRYQTYTAIEKSIQEHESASKDAKYWLYTLDY
GKRTTKAAINWCEATIKNITEGEDIYE

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21653; Mature: 21653

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYNDTTYAILGILTTDCTSGYDIKKLIDQSLNHFWKISYGQIYPTLKLLVEEELAEVA
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHC
PSSEGGRKERNEYSLTEKGVSTLKAWLEEPVQQLPVEKNEILLKLFFGNHQSNQASIRLI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCHHHHHH
EDYRTKLETRYQTYTAIEKSIQEHESASKDAKYWLYTLDYGKRTTKAAINWCEATIKNIT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
EGEDIYE
CCCCCCC
>Mature Secondary Structure
MKTYNDTTYAILGILTTDCTSGYDIKKLIDQSLNHFWKISYGQIYPTLKLLVEEELAEVA
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHC
PSSEGGRKERNEYSLTEKGVSTLKAWLEEPVQQLPVEKNEILLKLFFGNHQSNQASIRLI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCHHHHHH
EDYRTKLETRYQTYTAIEKSIQEHESASKDAKYWLYTLDYGKRTTKAAINWCEATIKNIT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
EGEDIYE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]