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The map label for this gene is ykgB [H]

Identifier: 23100666

GI number: 23100666

Start: 3343108

End: 3344112

Strand: Reverse

Name: ykgB [H]

Synonym: OB3211

Alternate gene names: 23100666

Gene position: 3344112-3343108 (Counterclockwise)

Preceding gene: 23100667

Following gene: 23100665

Centisome position: 92.11

GC content: 36.42

Gene sequence:

>1005_bases
ATGAACCCATTGTTAGATGTGTTTGTTGGCAGTTATGGAGAAAAGAATGAAGAAACTATTCACTGGCTTTCTTTTGATCC
ACTGATTGGCAAGCTTGCAAAGGTGGCAGCTTTTGAAGGCATAGATAATCCTTCATTTGTAGAAATTAATACGGATAAAT
CCTGTTTATATGCTATTAGTGAGGTCAAACAAGGAGAAGTTGTTTGTTATGGTATTGATCCATTAAACAACCAATTAACT
GAATGGAATCGTCATCCTACTCATGGCGGACCTTGTTATATTGAAGTGAATGGTGACCATGTGTTTGTCAGTAATTATAC
CGGTGGAAATCTAGTCGTCTATCGAACAAATGAGAATGGAAAAATAGAAGAAGAAACCGATTGTATTCATTTTTCAACTG
AATCAAGATTGCATACAATACGGCGCCTGCCCAAAAGCAATTATTATGTTGCAACAGACCTTGGACAGCATAAGTTATAT
TTCTTACATTTTAATCAAGAGACAGGAAAACTTCAGCGGCGATTTGAAGTGGAAACACCGTATCCTTCAGGACCTAGGCA
TATTGATTTTCATCCGGAAATAGAATTATTTTACGTAGTGAATGAATTCGATTCAACAATACTCGCATATGCATATGATT
TAGAAAAAGAGCTCGTACAGTTACAACAAAGAGTATCCACGTTATCGAGCGATGCTAAACAAGAAAATTATGGAGCAGAA
GTTCAATGCAACGGAGAATTTCTATATGTGTCAAACCGCGGACATGATTCGATTACAACTTACGAGATAATCAACAACGG
ATTGTTAAACAAACTATCAGTTTCGAGATTAGGTAGCAAATGGCCAAGACATTTCCAATCAAAAATTCCAGGAGATAAAT
ACGTGATTGTCGCCAATGAACATAGCAATGAGTTAATAGTTATGGAAAAAACAATACAGGATGGATGGGTAAATTCCAAT
CAGAGATATGCAGTCCCAAGGCCAGTTTGTGTAAAATTAATGTAG

Upstream 100 bases:

>100_bases
TCCACAGGCCTTGGGTGGGGTAGTTACTATTACCGTATGGCATCTCCTAATGTATTTTTTCATGTCTTACCAATTTACTA
GAAATGGAGGGGAGGAGCGA

Downstream 100 bases:

>100_bases
AAAGAAATATGGATTTCAACAAAAGGAAGTATTAGCTTCCTAAAAAAACATTACAAACATTATAATGTTATATTGACATT
ACAATATAATAGTGATACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNPLLDVFVGSYGEKNEETIHWLSFDPLIGKLAKVAAFEGIDNPSFVEINTDKSCLYAISEVKQGEVVCYGIDPLNNQLT
EWNRHPTHGGPCYIEVNGDHVFVSNYTGGNLVVYRTNENGKIEEETDCIHFSTESRLHTIRRLPKSNYYVATDLGQHKLY
FLHFNQETGKLQRRFEVETPYPSGPRHIDFHPEIELFYVVNEFDSTILAYAYDLEKELVQLQQRVSTLSSDAKQENYGAE
VQCNGEFLYVSNRGHDSITTYEIINNGLLNKLSVSRLGSKWPRHFQSKIPGDKYVIVANEHSNELIVMEKTIQDGWVNSN
QRYAVPRPVCVKLM

Sequences:

>Translated_334_residues
MNPLLDVFVGSYGEKNEETIHWLSFDPLIGKLAKVAAFEGIDNPSFVEINTDKSCLYAISEVKQGEVVCYGIDPLNNQLT
EWNRHPTHGGPCYIEVNGDHVFVSNYTGGNLVVYRTNENGKIEEETDCIHFSTESRLHTIRRLPKSNYYVATDLGQHKLY
FLHFNQETGKLQRRFEVETPYPSGPRHIDFHPEIELFYVVNEFDSTILAYAYDLEKELVQLQQRVSTLSSDAKQENYGAE
VQCNGEFLYVSNRGHDSITTYEIINNGLLNKLSVSRLGSKWPRHFQSKIPGDKYVIVANEHSNELIVMEKTIQDGWVNSN
QRYAVPRPVCVKLM
>Mature_334_residues
MNPLLDVFVGSYGEKNEETIHWLSFDPLIGKLAKVAAFEGIDNPSFVEINTDKSCLYAISEVKQGEVVCYGIDPLNNQLT
EWNRHPTHGGPCYIEVNGDHVFVSNYTGGNLVVYRTNENGKIEEETDCIHFSTESRLHTIRRLPKSNYYVATDLGQHKLY
FLHFNQETGKLQRRFEVETPYPSGPRHIDFHPEIELFYVVNEFDSTILAYAYDLEKELVQLQQRVSTLSSDAKQENYGAE
VQCNGEFLYVSNRGHDSITTYEIINNGLLNKLSVSRLGSKWPRHFQSKIPGDKYVIVANEHSNELIVMEKTIQDGWVNSN
QRYAVPRPVCVKLM

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=294, Percent_Identity=25.5102040816327, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 38246; Mature: 38246

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLLDVFVGSYGEKNEETIHWLSFDPLIGKLAKVAAFEGIDNPSFVEINTDKSCLYAIS
CCCHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH
EVKQGEVVCYGIDPLNNQLTEWNRHPTHGGPCYIEVNGDHVFVSNYTGGNLVVYRTNENG
HCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEECCCC
KIEEETDCIHFSTESRLHTIRRLPKSNYYVATDLGQHKLYFLHFNQETGKLQRRFEVETP
CCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCC
YPSGPRHIDFHPEIELFYVVNEFDSTILAYAYDLEKELVQLQQRVSTLSSDAKQENYGAE
CCCCCCEEECCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VQCNGEFLYVSNRGHDSITTYEIINNGLLNKLSVSRLGSKWPRHFQSKIPGDKYVIVANE
EEECCEEEEEECCCCCCEEEHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEC
HSNELIVMEKTIQDGWVNSNQRYAVPRPVCVKLM
CCCEEEEEEEECCCCCCCCCCEEECCCCEEEEEC
>Mature Secondary Structure
MNPLLDVFVGSYGEKNEETIHWLSFDPLIGKLAKVAAFEGIDNPSFVEINTDKSCLYAIS
CCCHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH
EVKQGEVVCYGIDPLNNQLTEWNRHPTHGGPCYIEVNGDHVFVSNYTGGNLVVYRTNENG
HCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEECCCC
KIEEETDCIHFSTESRLHTIRRLPKSNYYVATDLGQHKLYFLHFNQETGKLQRRFEVETP
CCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCC
YPSGPRHIDFHPEIELFYVVNEFDSTILAYAYDLEKELVQLQQRVSTLSSDAKQENYGAE
CCCCCCEEECCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VQCNGEFLYVSNRGHDSITTYEIINNGLLNKLSVSRLGSKWPRHFQSKIPGDKYVIVANE
EEECCEEEEEECCCCCCEEEHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEC
HSNELIVMEKTIQDGWVNSNQRYAVPRPVCVKLM
CCCEEEEEEEECCCCCCCCCCEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]