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The map label for this gene is lipO [H]

Identifier: 23100665

GI number: 23100665

Start: 3341057

End: 3342691

Strand: Reverse

Name: lipO [H]

Synonym: OB3210

Alternate gene names: 23100665

Gene position: 3342691-3341057 (Counterclockwise)

Preceding gene: 23100666

Following gene: 23100664

Centisome position: 92.07

GC content: 38.41

Gene sequence:

>1635_bases
GTGAAGGTTAAAAGATTATTGTTAATTCTTTTACTAATAGGATTTGTAACCGCTTTATCTGCTTGTAATAACGATGATGA
GGGTGGAGGAGATGGCGGAGATAGTGGTGGTGGCGACGATGCGACTGCTGCAAGCGAAGATGTAAATGAATCAGGAATGC
CTATTGTTGATGAAGAGCAAGAACTAACTTTTTTTGCAAACAAGCCTGCTCAAAATGAAGACAATGATTGGAATGATATC
CTAATTTGGAATGAATATAGAGATCAAACAAACATCAATGTAAATTGGGATCTTGTAAGTCCAGATGCTTTAGAAGAAAA
TCGTAACCTGGCTTTAGGTAGTGGCGATTTACCTGACGCGTTCTTCTTATCGCAGCTTACGAGTAGCGATTTATTAAGGT
ATGGTGGGCAAGATGTATTCCTACCGTTAAATGATTTAATTGAACAATACGCTCCAAACCTTACAGCGTTAATGGAAGAA
GACCCAAGTATTCGAAAAGCACTTACGTTCCCAGATGGAAACATTTACTCCATGCCAGCGCTTATTGAGGAAGACTTCCT
ATCCTTACGTCTGAGTGCTCGCCCATGGGTGAATGAAGATTGGTTGGATGAATTGGGAATGGAAATTCCAGAAACAACTG
GTGAATTCTATGAATATTTGAAGGCTGTAAAAGAGCTTGATCCAGTAGGTGGCGGTAAAACAATACCTTATGGTGGCACG
CAGATCCAAGAATTAGTGCAATGGTTAGCTGGCTCTTTTGGAGTCATGAATCAAGGTCCGTCAAATATGAACTATGATTT
GGATGCTTCTGGTGAAGTTCGTAACTTTGCTATAACCGATGAGTATAAGCAAATGCTTGAGTATATTAACAAACTGTACG
AAGAAGGATTAATTGATCAAAGTATCTTTACGATTGAGTGGGGACAATTCTTAGCAAATGCCTCTGATAATTTATATGGA
AGTATGATTTTCTATGATCCAATTGAATTATTTGGTGAAGATATTGGTTCTCAATATAGCAGTGTTGCAGCTTTAGAGGG
ACCAGAAGGACATCAAACATATAATAAACTTTCTTCTTCTGTGTGGGATCCAGCAAACTTAGTAATTACTAGTGAGAATT
CAAATCCAGCTGCTACGGTACGTTGGATGGATCATTTCTACAGTGATGAAGGTGCGGAACTTTACTACATGGGTGTAGAA
GGCGAAACATTTGAAATAGAAGACGGTGAAGCGGTTTATAAAGATCACATCTTAAATCCTGAAGGAGATATAACTTTTGA
ACAAGCGCTAGCCAAGCAGTTAACATGGTTAGGTTCGATTAACGGAATTATTAAAGCAGATTATTTCCAAGGTGGAGAAA
CTGCTCCTCAGTCCATGGAAGCTGCTGAGAAGATTGAACCTTTTGTTCCAGAAGAAATTTGGCCGCGTTTCACATTTACT
GACGAGGAGAATATTGTCTTACAATCTACTGGTCAAGATATCAACAACTATATCGAAGAAATGCGGGACAAATTTATTAC
TGGTGATGAAGATTTAGCTAACTGGGATAATTATGTAGACACACTAAACCAAATGGGATTAGAAGAGGTTGTAGAAGTAC
ATCAAAATGCTTACAACCGTTATACAGAGAATTAA

Upstream 100 bases:

>100_bases
AATAGAGGGGTGATACATAAAAGATAGGTATAGTTTGGTTTGACGTTTTAGGGGGATCAATCGTGTTGTAGAAATGTATT
TTCTAGGGAGGGAAAGCAAA

Downstream 100 bases:

>100_bases
TTTTTGATTACAGATGGATTTTGAAGAGAGAGGCTCCCCCCTTTTCCTCTCTCTACTCCCTTTGATAAAAGAAAAAGAGA
GTAGATTCTATTGAACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein lplA [H]

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MKVKRLLLILLLIGFVTALSACNNDDEGGGDGGDSGGGDDATAASEDVNESGMPIVDEEQELTFFANKPAQNEDNDWNDI
LIWNEYRDQTNINVNWDLVSPDALEENRNLALGSGDLPDAFFLSQLTSSDLLRYGGQDVFLPLNDLIEQYAPNLTALMEE
DPSIRKALTFPDGNIYSMPALIEEDFLSLRLSARPWVNEDWLDELGMEIPETTGEFYEYLKAVKELDPVGGGKTIPYGGT
QIQELVQWLAGSFGVMNQGPSNMNYDLDASGEVRNFAITDEYKQMLEYINKLYEEGLIDQSIFTIEWGQFLANASDNLYG
SMIFYDPIELFGEDIGSQYSSVAALEGPEGHQTYNKLSSSVWDPANLVITSENSNPAATVRWMDHFYSDEGAELYYMGVE
GETFEIEDGEAVYKDHILNPEGDITFEQALAKQLTWLGSINGIIKADYFQGGETAPQSMEAAEKIEPFVPEEIWPRFTFT
DEENIVLQSTGQDINNYIEEMRDKFITGDEDLANWDNYVDTLNQMGLEEVVEVHQNAYNRYTEN

Sequences:

>Translated_544_residues
MKVKRLLLILLLIGFVTALSACNNDDEGGGDGGDSGGGDDATAASEDVNESGMPIVDEEQELTFFANKPAQNEDNDWNDI
LIWNEYRDQTNINVNWDLVSPDALEENRNLALGSGDLPDAFFLSQLTSSDLLRYGGQDVFLPLNDLIEQYAPNLTALMEE
DPSIRKALTFPDGNIYSMPALIEEDFLSLRLSARPWVNEDWLDELGMEIPETTGEFYEYLKAVKELDPVGGGKTIPYGGT
QIQELVQWLAGSFGVMNQGPSNMNYDLDASGEVRNFAITDEYKQMLEYINKLYEEGLIDQSIFTIEWGQFLANASDNLYG
SMIFYDPIELFGEDIGSQYSSVAALEGPEGHQTYNKLSSSVWDPANLVITSENSNPAATVRWMDHFYSDEGAELYYMGVE
GETFEIEDGEAVYKDHILNPEGDITFEQALAKQLTWLGSINGIIKADYFQGGETAPQSMEAAEKIEPFVPEEIWPRFTFT
DEENIVLQSTGQDINNYIEEMRDKFITGDEDLANWDNYVDTLNQMGLEEVVEVHQNAYNRYTEN
>Mature_544_residues
MKVKRLLLILLLIGFVTALSACNNDDEGGGDGGDSGGGDDATAASEDVNESGMPIVDEEQELTFFANKPAQNEDNDWNDI
LIWNEYRDQTNINVNWDLVSPDALEENRNLALGSGDLPDAFFLSQLTSSDLLRYGGQDVFLPLNDLIEQYAPNLTALMEE
DPSIRKALTFPDGNIYSMPALIEEDFLSLRLSARPWVNEDWLDELGMEIPETTGEFYEYLKAVKELDPVGGGKTIPYGGT
QIQELVQWLAGSFGVMNQGPSNMNYDLDASGEVRNFAITDEYKQMLEYINKLYEEGLIDQSIFTIEWGQFLANASDNLYG
SMIFYDPIELFGEDIGSQYSSVAALEGPEGHQTYNKLSSSVWDPANLVITSENSNPAATVRWMDHFYSDEGAELYYMGVE
GETFEIEDGEAVYKDHILNPEGDITFEQALAKQLTWLGSINGIIKADYFQGGETAPQSMEAAEKIEPFVPEEIWPRFTFT
DEENIVLQSTGQDINNYIEEMRDKFITGDEDLANWDNYVDTLNQMGLEEVVEVHQNAYNRYTEN

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 61031; Mature: 61031

Theoretical pI: Translated: 3.64; Mature: 3.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKRLLLILLLIGFVTALSACNNDDEGGGDGGDSGGGDDATAASEDVNESGMPIVDEEQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ELTFFANKPAQNEDNDWNDILIWNEYRDQTNINVNWDLVSPDALEENRNLALGSGDLPDA
CEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCHHHHCCCCEEECCCCCCHH
FFLSQLTSSDLLRYGGQDVFLPLNDLIEQYAPNLTALMEEDPSIRKALTFPDGNIYSMPA
HHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCEEEHHCCCCCHHHEEECCCCCEEECHH
LIEEDFLSLRLSARPWVNEDWLDELGMEIPETTGEFYEYLKAVKELDPVGGGKTIPYGGT
HHHHHHHHEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
QIQELVQWLAGSFGVMNQGPSNMNYDLDASGEVRNFAITDEYKQMLEYINKLYEEGLIDQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCC
SIFTIEWGQFLANASDNLYGSMIFYDPIELFGEDIGSQYSSVAALEGPEGHQTYNKLSSS
CEEEEEHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH
VWDPANLVITSENSNPAATVRWMDHFYSDEGAELYYMGVEGETFEIEDGEAVYKDHILNP
CCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHCCCCC
EGDITFEQALAKQLTWLGSINGIIKADYFQGGETAPQSMEAAEKIEPFVPEEIWPRFTFT
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCHHHCCCEEEC
DEENIVLQSTGQDINNYIEEMRDKFITGDEDLANWDNYVDTLNQMGLEEVVEVHQNAYNR
CCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
YTEN
CCCC
>Mature Secondary Structure
MKVKRLLLILLLIGFVTALSACNNDDEGGGDGGDSGGGDDATAASEDVNESGMPIVDEEQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ELTFFANKPAQNEDNDWNDILIWNEYRDQTNINVNWDLVSPDALEENRNLALGSGDLPDA
CEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCHHHHCCCCEEECCCCCCHH
FFLSQLTSSDLLRYGGQDVFLPLNDLIEQYAPNLTALMEEDPSIRKALTFPDGNIYSMPA
HHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCEEEHHCCCCCHHHEEECCCCCEEECHH
LIEEDFLSLRLSARPWVNEDWLDELGMEIPETTGEFYEYLKAVKELDPVGGGKTIPYGGT
HHHHHHHHEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
QIQELVQWLAGSFGVMNQGPSNMNYDLDASGEVRNFAITDEYKQMLEYINKLYEEGLIDQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCC
SIFTIEWGQFLANASDNLYGSMIFYDPIELFGEDIGSQYSSVAALEGPEGHQTYNKLSSS
CEEEEEHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH
VWDPANLVITSENSNPAATVRWMDHFYSDEGAELYYMGVEGETFEIEDGEAVYKDHILNP
CCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHCCCCC
EGDITFEQALAKQLTWLGSINGIIKADYFQGGETAPQSMEAAEKIEPFVPEEIWPRFTFT
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCHHHCCCEEEC
DEENIVLQSTGQDINNYIEEMRDKFITGDEDLANWDNYVDTLNQMGLEEVVEVHQNAYNR
CCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
YTEN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7921237; 9384377 [H]