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The map label for this gene is ycgF [H]

Identifier: 23100649

GI number: 23100649

Start: 3324917

End: 3325555

Strand: Direct

Name: ycgF [H]

Synonym: OB3194

Alternate gene names: 23100649

Gene position: 3324917-3325555 (Clockwise)

Preceding gene: 23100648

Following gene: 23100650

Centisome position: 91.58

GC content: 35.37

Gene sequence:

>639_bases
ATGCAGACGTTCTTTAGCTATGTATTATTGGGGCTTTCTCTATCTATTCCAATTGGACCGATCAATGCAGCGCAATTAAA
TAAAGGTATTCATCAAGGGTTTTTCCATTCCTGGCTCGTTGGCATTGGTGGAATGTTTGCAGATGTGATTTTTATGTTAC
TGATTTACTTTGGTGTAGCACCCTTCCTAACAACACCATTTGTAAAAACATTTCTTTGGGTGTTTGGATGTTTTATCTTA
ATTTATATTGGAATGGAGTCAATAATAAAAGCCAAATCTACGCTGAGTAATACATCCAATATTAAATCTACATCAAAGCT
TAACTCATTTGGAACGGGATTTATCATCGCCATCTCCAATCCAATAAGTATAATTTTTTGGCTTGGTATATATGGTTCTG
TATTAGCAAAAACCACTGAAACTTCTACGAATAGTCAGTTACTAATCTACAGTAGTGGAATTTTCCTCGGAATTATTTTG
TGGGATATCTTTATGGCAAGCGTAGCGACAAGTTTCCGGAAATTTTTTCACAGTAAAGCTCTTTATTGGATTTCTATCGT
TGCAGGTATCGTGCTTATCGGTTTTGGCATCTTTTTCGGATACGAAGCATTGAAAGCCATTCAATATATACTGTTTTAG

Upstream 100 bases:

>100_bases
CTTCTACTTGTTTTTTTATGAAAAATTTTAGTTGTACAAGCTGTTAGATCGAATAGAATAGATATAGAACAGGAAAAATA
CGGCATTGGAGGCATCACTC

Downstream 100 bases:

>100_bases
GCATGCACCTAAACGACCTTCTCCTAATAAGCTATCTTTTAGGAGGAGGATTAGGCATGAGCATACTTTTTAATAATGTA
ACCATCAAGCAAAATTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MQTFFSYVLLGLSLSIPIGPINAAQLNKGIHQGFFHSWLVGIGGMFADVIFMLLIYFGVAPFLTTPFVKTFLWVFGCFIL
IYIGMESIIKAKSTLSNTSNIKSTSKLNSFGTGFIIAISNPISIIFWLGIYGSVLAKTTETSTNSQLLIYSSGIFLGIIL
WDIFMASVATSFRKFFHSKALYWISIVAGIVLIGFGIFFGYEALKAIQYILF

Sequences:

>Translated_212_residues
MQTFFSYVLLGLSLSIPIGPINAAQLNKGIHQGFFHSWLVGIGGMFADVIFMLLIYFGVAPFLTTPFVKTFLWVFGCFIL
IYIGMESIIKAKSTLSNTSNIKSTSKLNSFGTGFIIAISNPISIIFWLGIYGSVLAKTTETSTNSQLLIYSSGIFLGIIL
WDIFMASVATSFRKFFHSKALYWISIVAGIVLIGFGIFFGYEALKAIQYILF
>Mature_212_residues
MQTFFSYVLLGLSLSIPIGPINAAQLNKGIHQGFFHSWLVGIGGMFADVIFMLLIYFGVAPFLTTPFVKTFLWVFGCFIL
IYIGMESIIKAKSTLSNTSNIKSTSKLNSFGTGFIIAISNPISIIFWLGIYGSVLAKTTETSTNSQLLIYSSGIFLGIIL
WDIFMASVATSFRKFFHSKALYWISIVAGIVLIGFGIFFGYEALKAIQYILF

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23448; Mature: 23448

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFFSYVLLGLSLSIPIGPINAAQLNKGIHQGFFHSWLVGIGGMFADVIFMLLIYFGVA
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFLTTPFVKTFLWVFGCFILIYIGMESIIKAKSTLSNTSNIKSTSKLNSFGTGFIIAISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECC
PISIIFWLGIYGSVLAKTTETSTNSQLLIYSSGIFLGIILWDIFMASVATSFRKFFHSKA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYWISIVAGIVLIGFGIFFGYEALKAIQYILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQTFFSYVLLGLSLSIPIGPINAAQLNKGIHQGFFHSWLVGIGGMFADVIFMLLIYFGVA
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFLTTPFVKTFLWVFGCFILIYIGMESIIKAKSTLSNTSNIKSTSKLNSFGTGFIIAISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECC
PISIIFWLGIYGSVLAKTTETSTNSQLLIYSSGIFLGIILWDIFMASVATSFRKFFHSKA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYWISIVAGIVLIGFGIFFGYEALKAIQYILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]