| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is linC [H]
Identifier: 23100638
GI number: 23100638
Start: 3313414
End: 3314184
Strand: Reverse
Name: linC [H]
Synonym: OB3183
Alternate gene names: 23100638
Gene position: 3314184-3313414 (Counterclockwise)
Preceding gene: 23100640
Following gene: 23100636
Centisome position: 91.29
GC content: 38.91
Gene sequence:
>771_bases ATGACATTTCCAATATTAGAAGATAAAGTAGCTATCGTTACTGGTGCAGCTATGGGTATGGGGAAAGCAACGGCTATATT GTTTGCAGAATCAAAAGCGAAGGTAGTAATTGCTGATTTTAATGAAGAAAAGGGGCAAGAAGTTGTAGAAGAAGTTAAAC AAGCAGGTGGTCAAGCTGCATTTATTAAGGTAGATATATCTGACTCTGCACAAGTAAAACAGATGGTTCAATTTGCGGTA GACCAATTTGGGAAATTAGATATTGCGGTGAATAATGCGGCTCTAACGCCAGATGATAAACCAGCTTCTGAATTTGATGA AGATTATTGGGATAAGCTTATTTCTGTTGATCTAACAGGTACGGCATTATGTATGAAATATGAGCTTCAACAACTTTTAG AGCAAGGTAATGGAGGATCTATTGTAAATATTTCATCAGTGAGCGGTTTCCGACCACAGCCAAATAATATTGCGTATGTA GCAGCAAAACACGGAGTAGTAGGTATGACCAAAGTAGCTGCTCTAGAAAATGGACCACAAAATATTCGCGTGAATACAGT AGCTCCAGGTGCAATTGATACACCAATGTTAAGAGGAGCTCTGGAGCAATTTAACCATACGGAAGAAGAATATGCTCCAC AATTAAGCCTGTTAAATCGTTTTGGACAAGCACGTGAAGTAGCCCAAGCAAGTCTTTGGTTAGCTTCTGATGCAGCTTCT TATGTAACAGGTACAACAATTCACGCTGATGCTGGATATACTTCAAGATAA
Upstream 100 bases:
>100_bases TCTTTGTTCATTAACAAGCAAATGTTATCAAAATGTATATGGTAAGGGTTTCAAATAAAGCGTAAAGTAAAAAATATAAA CTGACAAAGGAGGAATTATA
Downstream 100 bases:
>100_bases AGAGCAAAGCATAACTGTCGAAGAGTTACTTATTCTCTTCGACAGTTATTTTTATTTTTCATAGTTACGTCCTAATTCAT ATGCTTGCATTAACCAATTA
Product: glucose 1-dehydrogenase
Products: D-glucono-1,5-lactone; NADH; NADPH; H+
Alternate protein names: 2,5-DDOL dehydrogenase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTFPILEDKVAIVTGAAMGMGKATAILFAESKAKVVIADFNEEKGQEVVEEVKQAGGQAAFIKVDISDSAQVKQMVQFAV DQFGKLDIAVNNAALTPDDKPASEFDEDYWDKLISVDLTGTALCMKYELQQLLEQGNGGSIVNISSVSGFRPQPNNIAYV AAKHGVVGMTKVAALENGPQNIRVNTVAPGAIDTPMLRGALEQFNHTEEEYAPQLSLLNRFGQAREVAQASLWLASDAAS YVTGTTIHADAGYTSR
Sequences:
>Translated_256_residues MTFPILEDKVAIVTGAAMGMGKATAILFAESKAKVVIADFNEEKGQEVVEEVKQAGGQAAFIKVDISDSAQVKQMVQFAV DQFGKLDIAVNNAALTPDDKPASEFDEDYWDKLISVDLTGTALCMKYELQQLLEQGNGGSIVNISSVSGFRPQPNNIAYV AAKHGVVGMTKVAALENGPQNIRVNTVAPGAIDTPMLRGALEQFNHTEEEYAPQLSLLNRFGQAREVAQASLWLASDAAS YVTGTTIHADAGYTSR >Mature_255_residues TFPILEDKVAIVTGAAMGMGKATAILFAESKAKVVIADFNEEKGQEVVEEVKQAGGQAAFIKVDISDSAQVKQMVQFAVD QFGKLDIAVNNAALTPDDKPASEFDEDYWDKLISVDLTGTALCMKYELQQLLEQGNGGSIVNISSVSGFRPQPNNIAYVA AKHGVVGMTKVAALENGPQNIRVNTVAPGAIDTPMLRGALEQFNHTEEEYAPQLSLLNRFGQAREVAQASLWLASDAASY VTGTTIHADAGYTSR
Specific function: Catalyzes the degradation of 2,5-dichloro-2,5- cyclohexadiene-1,4-diol (2,5-DDOL) into 2,5-dichlorohydroquinone (2,5-DCHQ) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=31.4741035856574, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=32.421875, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI31542939, Length=197, Percent_Identity=36.0406091370558, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=33.4801762114537, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=30.3501945525292, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI66933014, Length=252, Percent_Identity=34.5238095238095, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=32.3076923076923, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=36.6279069767442, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=29.3877551020408, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI4504505, Length=201, Percent_Identity=34.8258706467662, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=27.734375, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=30.2197802197802, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=30.7291666666667, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI4758504, Length=230, Percent_Identity=30, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=28.8537549407115, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI109715829, Length=204, Percent_Identity=28.921568627451, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4503301, Length=259, Percent_Identity=28.1853281853282, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI302344755, Length=110, Percent_Identity=34.5454545454545, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI83715985, Length=230, Percent_Identity=27.3913043478261, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI209862901, Length=233, Percent_Identity=26.1802575107296, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI19923983, Length=233, Percent_Identity=26.1802575107296, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI210032110, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI40254986, Length=195, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=24.3781094527363, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=35.6275303643725, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=34.251968503937, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=32.5581395348837, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=34.136546184739, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=36.8, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=32.0158102766798, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=31.25, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=27.1255060728745, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=29.4117647058824, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787526, Length=251, Percent_Identity=30.2788844621514, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=31.4741035856574, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=27.1317829457364, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=29.8387096774194, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=25.6830601092896, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=33.8709677419355, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=33.4661354581673, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=31.7460317460317, Blast_Score=120, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=33.0798479087452, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=33.596837944664, Blast_Score=118, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=31.0483870967742, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=31.2252964426877, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=30.0380228136882, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=30.0380228136882, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=30.9701492537313, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=30.4, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=33.2046332046332, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=28.7878787878788, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=29.3436293436293, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=29.9625468164794, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=29.3893129770992, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=30.6201550387597, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=29.8804780876494, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17536025, Length=268, Percent_Identity=31.7164179104478, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=31.4176245210728, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=28.2442748091603, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=29.4573643410853, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=29.811320754717, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17568967, Length=199, Percent_Identity=33.1658291457286, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=27.8625954198473, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71997099, Length=209, Percent_Identity=32.5358851674641, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17564282, Length=197, Percent_Identity=30.9644670050761, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=29.5454545454545, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=30.0518134715026, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=30.0518134715026, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=29.5880149812734, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538486, Length=259, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=29.5019157088123, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17555612, Length=209, Percent_Identity=30.622009569378, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71982365, Length=195, Percent_Identity=31.2820512820513, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17561272, Length=252, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17508651, Length=257, Percent_Identity=26.8482490272374, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI86565303, Length=215, Percent_Identity=29.3023255813954, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=28.5024154589372, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=29.6875, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322861, Length=195, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6323882, Length=224, Percent_Identity=27.6785714285714, Blast_Score=72, Evalue=9e-14, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=34.5098039215686, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=36.1867704280156, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=34.2307692307692, Blast_Score=127, Evalue=5e-30, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=33.8645418326693, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=34.0080971659919, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=32.8063241106719, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI17737361, Length=236, Percent_Identity=32.6271186440678, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI18859837, Length=220, Percent_Identity=32.7272727272727, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24644337, Length=260, Percent_Identity=31.9230769230769, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24640492, Length=210, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24643142, Length=258, Percent_Identity=31.7829457364341, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI21357673, Length=194, Percent_Identity=31.4432989690722, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24663911, Length=237, Percent_Identity=27.8481012658228, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24580925, Length=203, Percent_Identity=27.0935960591133, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI161076933, Length=188, Percent_Identity=30.3191489361702, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24584748, Length=188, Percent_Identity=30.3191489361702, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI21358495, Length=201, Percent_Identity=26.3681592039801, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI21355631, Length=162, Percent_Identity=29.0123456790123, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24648944, Length=237, Percent_Identity=26.1603375527426, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581726, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24665247, Length=219, Percent_Identity=29.6803652968037, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI221331216, Length=219, Percent_Identity=29.6803652968037, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.47
Molecular weight: Translated: 27385; Mature: 27254
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPILEDKVAIVTGAAMGMGKATAILFAESKAKVVIADFNEEKGQEVVEEVKQAGGQAA CCCCCCCCCEEEEEECHHCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCEE FIKVDISDSAQVKQMVQFAVDQFGKLDIAVNNAALTPDDKPASEFDEDYWDKLISVDLTG EEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHEEEECCC TALCMKYELQQLLEQGNGGSIVNISSVSGFRPQPNNIAYVAAKHGVVGMTKVAALENGPQ HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCC NIRVNTVAPGAIDTPMLRGALEQFNHTEEEYAPQLSLLNRFGQAREVAQASLWLASDAAS EEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YVTGTTIHADAGYTSR HHCCCEEEECCCCCCC >Mature Secondary Structure TFPILEDKVAIVTGAAMGMGKATAILFAESKAKVVIADFNEEKGQEVVEEVKQAGGQAA CCCCCCCCEEEEEECHHCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCEE FIKVDISDSAQVKQMVQFAVDQFGKLDIAVNNAALTPDDKPASEFDEDYWDKLISVDLTG EEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHEEEECCC TALCMKYELQQLLEQGNGGSIVNISSVSGFRPQPNNIAYVAAKHGVVGMTKVAALENGPQ HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCC NIRVNTVAPGAIDTPMLRGALEQFNHTEEEYAPQLSLLNRFGQAREVAQASLWLASDAAS EEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YVTGTTIHADAGYTSR HHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-D-glucose; NAD+; NADP+
Specific reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7515041; 12450824 [H]