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The map label for this gene is nudL [H]

Identifier: 23100567

GI number: 23100567

Start: 3240598

End: 3241227

Strand: Direct

Name: nudL [H]

Synonym: OB3112

Alternate gene names: 23100567

Gene position: 3240598-3241227 (Clockwise)

Preceding gene: 23100565

Following gene: 23100572

Centisome position: 89.26

GC content: 38.25

Gene sequence:

>630_bases
ATGAATATTCAAGAAATATTTAACCAACTTCATGACCGAACTCCATCCCTCATGGGGCACGAACATTTCAAAGAATCCTC
TGTAATCATCCCACTAATCGAAATAGATGGTGAAACTCACATATTGTTTGAAGTGCGTTCCATGCAAATGCGTAGTCAGC
CAGGAGATATATGTTTTCCTGGTGGTCGAGTTGATTATACAGATAAGGACCCATCTCACTGTGCGATTAGAGAAACAATG
GAAGAACTTGGCCTTTCGGAACAAGATATTACTGAACCAATCCCCCTAGACTATATCGTGAATGACCTTGGTAGAATTAT
CTATCCGTTTGTGGGCAGAATCATTCATCCTGACAAAATGACACCGAATCCAGCAGAAGTTGATCATACTTTTACAGTAC
CACTATCTTTCTTTTTAGAAACAGAGCCGAAAAGATATAAAGTACATTTACAAGTAAAACCAGAGGATAACTTTCCTTAC
CATCTAATTGTTGGCGGAGAAAATTATGACTGGCGTATCCGTCATGTTGAGGAATTGTTTTATCATTATAACGATCAGGC
CATCTGGGGATTAACCGCCAAAATATTGACTCATTTTATTGAACTTATTAAAACAAACGAAAGGAGCTAG

Upstream 100 bases:

>100_bases
TTCGCTAGAAATAAAACCTCTAAAGTGACAGTCAACAGAAACAATTATAAAATAAAAGTATGGATATCATTAAATCCATG
TTCTTACAGGAGGTAATGCA

Downstream 100 bases:

>100_bases
CACAATAACTAGCTCCTTTTTTCTATTCATCAAAACGCTCCCGCGCCTCCACCACCTGTACTGCTAGTTGTATTATTATT
ACTAGAGCTACTAGCATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNIQEIFNQLHDRTPSLMGHEHFKESSVIIPLIEIDGETHILFEVRSMQMRSQPGDICFPGGRVDYTDKDPSHCAIRETM
EELGLSEQDITEPIPLDYIVNDLGRIIYPFVGRIIHPDKMTPNPAEVDHTFTVPLSFFLETEPKRYKVHLQVKPEDNFPY
HLIVGGENYDWRIRHVEELFYHYNDQAIWGLTAKILTHFIELIKTNERS

Sequences:

>Translated_209_residues
MNIQEIFNQLHDRTPSLMGHEHFKESSVIIPLIEIDGETHILFEVRSMQMRSQPGDICFPGGRVDYTDKDPSHCAIRETM
EELGLSEQDITEPIPLDYIVNDLGRIIYPFVGRIIHPDKMTPNPAEVDHTFTVPLSFFLETEPKRYKVHLQVKPEDNFPY
HLIVGGENYDWRIRHVEELFYHYNDQAIWGLTAKILTHFIELIKTNERS
>Mature_209_residues
MNIQEIFNQLHDRTPSLMGHEHFKESSVIIPLIEIDGETHILFEVRSMQMRSQPGDICFPGGRVDYTDKDPSHCAIRETM
EELGLSEQDITEPIPLDYIVNDLGRIIYPFVGRIIHPDKMTPNPAEVDHTFTVPLSFFLETEPKRYKVHLQVKPEDNFPY
HLIVGGENYDWRIRHVEELFYHYNDQAIWGLTAKILTHFIELIKTNERS

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=121, Percent_Identity=42.9752066115703, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17536993, Length=181, Percent_Identity=27.6243093922652, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17510677, Length=128, Percent_Identity=34.375, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 24457; Mature: 24457

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQEIFNQLHDRTPSLMGHEHFKESSVIIPLIEIDGETHILFEVRSMQMRSQPGDICFP
CCHHHHHHHHHCCCCCHHCHHHCCCCCEEEEEEEECCCEEEEEEEEHHHHHCCCCCEECC
GGRVDYTDKDPSHCAIRETMEELGLSEQDITEPIPLDYIVNDLGRIIYPFVGRIIHPDKM
CCEECCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCEECCCCC
TPNPAEVDHTFTVPLSFFLETEPKRYKVHLQVKPEDNFPYHLIVGGENYDWRIRHVEELF
CCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHH
YHYNDQAIWGLTAKILTHFIELIKTNERS
HHCCCCEEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIQEIFNQLHDRTPSLMGHEHFKESSVIIPLIEIDGETHILFEVRSMQMRSQPGDICFP
CCHHHHHHHHHCCCCCHHCHHHCCCCCEEEEEEEECCCEEEEEEEEHHHHHCCCCCEECC
GGRVDYTDKDPSHCAIRETMEELGLSEQDITEPIPLDYIVNDLGRIIYPFVGRIIHPDKM
CCEECCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCEECCCCC
TPNPAEVDHTFTVPLSFFLETEPKRYKVHLQVKPEDNFPYHLIVGGENYDWRIRHVEELF
CCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHH
YHYNDQAIWGLTAKILTHFIELIKTNERS
HHCCCCEEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]