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The map label for this gene is kdpD [H]

Identifier: 23100565

GI number: 23100565

Start: 3238759

End: 3239448

Strand: Direct

Name: kdpD [H]

Synonym: OB3110

Alternate gene names: 23100565

Gene position: 3238759-3239448 (Clockwise)

Preceding gene: 23100555

Following gene: 23100567

Centisome position: 89.21

GC content: 35.36

Gene sequence:

>690_bases
ATGAAAAAAATTAGAGGCCGCATGGACGAAAGCATCCTTGTCTGCGTATACTATGGTCCAAATGGAGAGCGTTTAATCCG
TCGTGGACATAAGCTTGCGCAAATCATGGATTGTCCTTTATATGTATTAACTGTAGATGCTTTACCTTACGATGAATTCG
ATGCAGAAAAATCCGGTTATGTAGAACGTTGGAAAGAACTTTGTGATGAACTTGATGTTGAAGACTTTATTATTAGAGAT
AATGAAAGGCGCTCATCCGTAAAAGCGATAAAAGAAGTAGCACACCAACATAATATTACCCAAATAATTATTGGCCAAAG
TGCACAAAATCGCTGGGAGGAAATCACAAAAGGATCTTTTGTCAATGTATTACTTCGTGAAATTACATTTATCGACCTTC
ATATCGTGTCGGTTGATCGTACATTGAAAAGTACAGATGATATGATCTACGAAAAAGGCGTGCGTGGATTTTTGCAAAAA
GATGAAGAAAAAGAAGCTTATCGCTTAAGTTTTGCACGTTCCAAGCATAATTTATATGAAGGCATTTTCTATAAAGAGAT
TGGCACCGACTTTAATAACGGTATTTTTAAATTCGTTAATAGTAAAGGTAAAACCTGTCAGGTTCATGTTACTGAAGATA
TTTGCACAGGAAAATTGACTGATCCTCCAAACGTTAAAAATAATAATTAA

Upstream 100 bases:

>100_bases
CCGGTTATACAAAAATAACTAAAAGGATTGTCCTTCACATTAGACTGCTAACCGGATTAAAATCGTTACATGAATATATT
TAAAGAGGTGAGTTGCCGTT

Downstream 100 bases:

>100_bases
TGATTAAAAGATCCAAGCCATTAGTCGCTCATTCCGATTAATCGTTTGGATCTTTATTTTGGAAAAATGGTCACTTGGTT
CAACCAAAACTTAGCAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKKIRGRMDESILVCVYYGPNGERLIRRGHKLAQIMDCPLYVLTVDALPYDEFDAEKSGYVERWKELCDELDVEDFIIRD
NERRSSVKAIKEVAHQHNITQIIIGQSAQNRWEEITKGSFVNVLLREITFIDLHIVSVDRTLKSTDDMIYEKGVRGFLQK
DEEKEAYRLSFARSKHNLYEGIFYKEIGTDFNNGIFKFVNSKGKTCQVHVTEDICTGKLTDPPNVKNNN

Sequences:

>Translated_229_residues
MKKIRGRMDESILVCVYYGPNGERLIRRGHKLAQIMDCPLYVLTVDALPYDEFDAEKSGYVERWKELCDELDVEDFIIRD
NERRSSVKAIKEVAHQHNITQIIIGQSAQNRWEEITKGSFVNVLLREITFIDLHIVSVDRTLKSTDDMIYEKGVRGFLQK
DEEKEAYRLSFARSKHNLYEGIFYKEIGTDFNNGIFKFVNSKGKTCQVHVTEDICTGKLTDPPNVKNNN
>Mature_229_residues
MKKIRGRMDESILVCVYYGPNGERLIRRGHKLAQIMDCPLYVLTVDALPYDEFDAEKSGYVERWKELCDELDVEDFIIRD
NERRSSVKAIKEVAHQHNITQIIIGQSAQNRWEEITKGSFVNVLLREITFIDLHIVSVDRTLKSTDDMIYEKGVRGFLQK
DEEKEAYRLSFARSKHNLYEGIFYKEIGTDFNNGIFKFVNSKGKTCQVHVTEDICTGKLTDPPNVKNNN

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon. KdpD may function as a membrane-associated protein kinase that phosphorylates kdpE in response to environmental signals [H]

COG id: COG2205

COG function: function code T; Osmosensitive K+ channel histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR003852
- InterPro:   IPR006016 [H]

Pfam domain/function: PF02702 KdpD; PF00582 Usp [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 26574; Mature: 26574

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIRGRMDESILVCVYYGPNGERLIRRGHKLAQIMDCPLYVLTVDALPYDEFDAEKSGY
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCH
VERWKELCDELDVEDFIIRDNERRSSVKAIKEVAHQHNITQIIIGQSAQNRWEEITKGSF
HHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCHH
VNVLLREITFIDLHIVSVDRTLKSTDDMIYEKGVRGFLQKDEEKEAYRLSFARSKHNLYE
HHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GIFYKEIGTDFNNGIFKFVNSKGKTCQVHVTEDICTGKLTDPPNVKNNN
HHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIRGRMDESILVCVYYGPNGERLIRRGHKLAQIMDCPLYVLTVDALPYDEFDAEKSGY
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCH
VERWKELCDELDVEDFIIRDNERRSSVKAIKEVAHQHNITQIIIGQSAQNRWEEITKGSF
HHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCHH
VNVLLREITFIDLHIVSVDRTLKSTDDMIYEKGVRGFLQKDEEKEAYRLSFARSKHNLYE
HHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GIFYKEIGTDFNNGIFKFVNSKGKTCQVHVTEDICTGKLTDPPNVKNNN
HHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]