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The map label for this gene is fadF [H]

Identifier: 23100469

GI number: 23100469

Start: 3123550

End: 3125658

Strand: Reverse

Name: fadF [H]

Synonym: OB3014

Alternate gene names: 23100469

Gene position: 3125658-3123550 (Counterclockwise)

Preceding gene: 23100470

Following gene: 23100468

Centisome position: 86.09

GC content: 38.07

Gene sequence:

>2109_bases
GTGGATACTTTTCTAATTATCAATTGGATTGCATTTTTGGCTATTACTATTTATGCTTTTTATTTATTTGCCAAAGTAAT
TGCAACCCGAATCGCTTATATTAGGCTAGGAAAGAAATCAGAGTTTGATGGTGAATTTAAATTGCGCTTGAAGCGAATTG
GAAAAATTGTATTTGGTCAATCCAAACTTCTGAAGGATAAGAAGTCTGGAGCAATTCACGTTATGATGTTCTATGGTTTT
ATTTTAGTTCAATTTGGTGCAATTGATATGTTTGTAAAGGGTTTATCTCCAGGTAATCATCTGCCATTTGGTATGTTTTA
TCCTGGATTTGTATTCTTTCAAGAACTAGTAACCTTGATGATTTTAGTTGCAGTTATTTGGGCGTTTTATCGTCGATATA
TGGAAAAGCTAGTGCGACTTAAAAGGGGATTCAAAGCAGGATTAGTGTTAATTTTTATCGGTACATTAATGGTCTCTGTG
CTATTTGGAAATGGTATGGCAATGATTTGGCATGGGCATGAGATTACCTGGGCCGAGCCTGTTGCTAGTGTATTTGCTCT
TGCTTTTAGTTGGGCGTCAGCAGAAACAGCTACCGTATTGTTTTACATTGCTTGGTGGGTACATACAATTACCCTCCTTA
CCTTTTTAGTTTATGTTCCACAATCAAAGCACGCCCATTTAATCGCTGCGCCGATTAATGTATTTTTGAGTAAAAAAGTT
CCAGGTAAATTGAAGAAATTAGATTTTGATATGGAAAATGTAGATGAAGAAAGTGAAGAGGAAATTGCTTTCGGTGTTGG
GAAAGTAGAAGATTTTGAACAGCATCAAATGATTGATTTTTATGCGTGTGTAGAATGTGGACGTTGTACGGATGTTTGCC
CAGCCTCAGGTACAGGGAAAATGTTATCTCCAATGGATATCATGATTAAAGTTCGTGATCATTTAACAGAAAAAGGAGCT
GCGATAACCGGTAAATCATCTTGGGTGCCGTCTTATGCATTTTCGGGTAGTGCTGGGAATCAAGCTTCAGCGGATAAAGA
AGTTGCTGCAACTATTCAAAGCTCTAGTTTGATTGGTGATGTAATCACAGAAGAGGAACTTGCTGGATGTACAACTTGTC
GTAACTGTGAGGATGCCTGCCCAGTAAATAATGAACACGTGGGTACGATTATTGATATGCGTCGTTACTTAGTTATGACA
GAAGGAAAAATGGATTCAGATATCCAACGTGCTGTTACGAATATCGAGAGACAAGGTAACCCTTGGGGACTTTCCAAAAA
AGATCGCGTAAAATGGCGCGATGAAGATGAATCTGTTTATATTCCTACGGTAAAAGAATTGAAGAAAGAAGATAAGTCGT
TTGAATATCTATTCTGGGTAAGTTCTATGGGTGCCTTTGATAGCCGCAGCCAAAAAATTGCCCTTGCTTTTGCAAAGCTA
ATGAATCAAGCTGGTGTAAGCTTTGCTATCTTAGGGAATACAGAAGCAAACTCTGGAGATACAGCTCGTCGTATTGGTAA
TGAGTTTTTATTCCAAGAAATTGCTGAGAAAAATATTAAGCAATTTAATAAACATGACGTCAAGAAAATTGTCACGATTG
ATCCGCATGCTTACAATATATTTAAGAATGAATATCCTGACTTTGGATTTGAAGCAGAAGTATATCATCACACACAAATG
CTTTATGATCTAGTAATGTCAGATAGACTTAAACCAGAAAGAGCAATAAACGAAAGGTTAACCTATCACGACTCTTGTTA
TCTAGGAAGGTATAATGGTGTGTATGATCCACCACGAGAAATTTTAAAATCCATTCCTGGTCTAGAGTTAGTAGAAATGA
ATCGTAGTCGTGAGAACGGTATGTGCTGTGGTGCTGGTGGTGGCCTGATGTGGACGGAAGAGACTACGGGAGGAAGAATT
AATGTGGCTCGTACGGAACAGGCATTGCAAGTAGAACCGACTATGATATCTAGCGCTTGCCCATACTGCCTCACGATGTT
GAGTGATGGAACAAAAGCAAAAGAAGTGGAAGAGGATATCGGTACAATGGATGTAGCTGAAATACTAGCAATCTCTGTAT
TGGATAAAGAAGAGGTAAAAACAGCATAA

Upstream 100 bases:

>100_bases
GAATGATCATTCATGTTTAAAGTAATAGATAAGGATTTCTTTCACGCAAGAAAATGTAATCGTTATCAAAAGGATACTAC
ACAAAGAGGGGGAGCAGACG

Downstream 100 bases:

>100_bases
TGTGTTTCTTCCAACGGCCACAATTTTAAATTTAAATTGAAGCAGAGGCTTAGGTGAACATAGTAGTCCTTTGGGGGAAG
TGGTTATCAATCTTATCTTC

Product: iron-sulphur-binding reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MDTFLIINWIAFLAITIYAFYLFAKVIATRIAYIRLGKKSEFDGEFKLRLKRIGKIVFGQSKLLKDKKSGAIHVMMFYGF
ILVQFGAIDMFVKGLSPGNHLPFGMFYPGFVFFQELVTLMILVAVIWAFYRRYMEKLVRLKRGFKAGLVLIFIGTLMVSV
LFGNGMAMIWHGHEITWAEPVASVFALAFSWASAETATVLFYIAWWVHTITLLTFLVYVPQSKHAHLIAAPINVFLSKKV
PGKLKKLDFDMENVDEESEEEIAFGVGKVEDFEQHQMIDFYACVECGRCTDVCPASGTGKMLSPMDIMIKVRDHLTEKGA
AITGKSSWVPSYAFSGSAGNQASADKEVAATIQSSSLIGDVITEEELAGCTTCRNCEDACPVNNEHVGTIIDMRRYLVMT
EGKMDSDIQRAVTNIERQGNPWGLSKKDRVKWRDEDESVYIPTVKELKKEDKSFEYLFWVSSMGAFDSRSQKIALAFAKL
MNQAGVSFAILGNTEANSGDTARRIGNEFLFQEIAEKNIKQFNKHDVKKIVTIDPHAYNIFKNEYPDFGFEAEVYHHTQM
LYDLVMSDRLKPERAINERLTYHDSCYLGRYNGVYDPPREILKSIPGLELVEMNRSRENGMCCGAGGGLMWTEETTGGRI
NVARTEQALQVEPTMISSACPYCLTMLSDGTKAKEVEEDIGTMDVAEILAISVLDKEEVKTA

Sequences:

>Translated_702_residues
MDTFLIINWIAFLAITIYAFYLFAKVIATRIAYIRLGKKSEFDGEFKLRLKRIGKIVFGQSKLLKDKKSGAIHVMMFYGF
ILVQFGAIDMFVKGLSPGNHLPFGMFYPGFVFFQELVTLMILVAVIWAFYRRYMEKLVRLKRGFKAGLVLIFIGTLMVSV
LFGNGMAMIWHGHEITWAEPVASVFALAFSWASAETATVLFYIAWWVHTITLLTFLVYVPQSKHAHLIAAPINVFLSKKV
PGKLKKLDFDMENVDEESEEEIAFGVGKVEDFEQHQMIDFYACVECGRCTDVCPASGTGKMLSPMDIMIKVRDHLTEKGA
AITGKSSWVPSYAFSGSAGNQASADKEVAATIQSSSLIGDVITEEELAGCTTCRNCEDACPVNNEHVGTIIDMRRYLVMT
EGKMDSDIQRAVTNIERQGNPWGLSKKDRVKWRDEDESVYIPTVKELKKEDKSFEYLFWVSSMGAFDSRSQKIALAFAKL
MNQAGVSFAILGNTEANSGDTARRIGNEFLFQEIAEKNIKQFNKHDVKKIVTIDPHAYNIFKNEYPDFGFEAEVYHHTQM
LYDLVMSDRLKPERAINERLTYHDSCYLGRYNGVYDPPREILKSIPGLELVEMNRSRENGMCCGAGGGLMWTEETTGGRI
NVARTEQALQVEPTMISSACPYCLTMLSDGTKAKEVEEDIGTMDVAEILAISVLDKEEVKTA
>Mature_702_residues
MDTFLIINWIAFLAITIYAFYLFAKVIATRIAYIRLGKKSEFDGEFKLRLKRIGKIVFGQSKLLKDKKSGAIHVMMFYGF
ILVQFGAIDMFVKGLSPGNHLPFGMFYPGFVFFQELVTLMILVAVIWAFYRRYMEKLVRLKRGFKAGLVLIFIGTLMVSV
LFGNGMAMIWHGHEITWAEPVASVFALAFSWASAETATVLFYIAWWVHTITLLTFLVYVPQSKHAHLIAAPINVFLSKKV
PGKLKKLDFDMENVDEESEEEIAFGVGKVEDFEQHQMIDFYACVECGRCTDVCPASGTGKMLSPMDIMIKVRDHLTEKGA
AITGKSSWVPSYAFSGSAGNQASADKEVAATIQSSSLIGDVITEEELAGCTTCRNCEDACPVNNEHVGTIIDMRRYLVMT
EGKMDSDIQRAVTNIERQGNPWGLSKKDRVKWRDEDESVYIPTVKELKKEDKSFEYLFWVSSMGAFDSRSQKIALAFAKL
MNQAGVSFAILGNTEANSGDTARRIGNEFLFQEIAEKNIKQFNKHDVKKIVTIDPHAYNIFKNEYPDFGFEAEVYHHTQM
LYDLVMSDRLKPERAINERLTYHDSCYLGRYNGVYDPPREILKSIPGLELVEMNRSRENGMCCGAGGGLMWTEETTGGRI
NVARTEQALQVEPTMISSACPYCLTMLSDGTKAKEVEEDIGTMDVAEILAISVLDKEEVKTA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 78970; Mature: 78970

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFLIINWIAFLAITIYAFYLFAKVIATRIAYIRLGKKSEFDGEFKLRLKRIGKIVFGQ
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC
SKLLKDKKSGAIHVMMFYGFILVQFGAIDMFVKGLSPGNHLPFGMFYPGFVFFQELVTLM
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
ILVAVIWAFYRRYMEKLVRLKRGFKAGLVLIFIGTLMVSVLFGNGMAMIWHGHEITWAEP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
VASVFALAFSWASAETATVLFYIAWWVHTITLLTFLVYVPQSKHAHLIAAPINVFLSKKV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCC
PGKLKKLDFDMENVDEESEEEIAFGVGKVEDFEQHQMIDFYACVECGRCTDVCPASGTGK
CCHHHHCCCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
MLSPMDIMIKVRDHLTEKGAAITGKSSWVPSYAFSGSAGNQASADKEVAATIQSSSLIGD
CCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHH
VITEEELAGCTTCRNCEDACPVNNEHVGTIIDMRRYLVMTEGKMDSDIQRAVTNIERQGN
HHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCC
PWGLSKKDRVKWRDEDESVYIPTVKELKKEDKSFEYLFWVSSMGAFDSRSQKIALAFAKL
CCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHH
MNQAGVSFAILGNTEANSGDTARRIGNEFLFQEIAEKNIKQFNKHDVKKIVTIDPHAYNI
HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEEECCCHHHH
FKNEYPDFGFEAEVYHHTQMLYDLVMSDRLKPERAINERLTYHDSCYLGRYNGVYDPPRE
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHH
ILKSIPGLELVEMNRSRENGMCCGAGGGLMWTEETTGGRINVARTEQALQVEPTMISSAC
HHHHCCCCEEEECCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCHHEECCHHHHHHH
PYCLTMLSDGTKAKEVEEDIGTMDVAEILAISVLDKEEVKTA
HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MDTFLIINWIAFLAITIYAFYLFAKVIATRIAYIRLGKKSEFDGEFKLRLKRIGKIVFGQ
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCC
SKLLKDKKSGAIHVMMFYGFILVQFGAIDMFVKGLSPGNHLPFGMFYPGFVFFQELVTLM
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
ILVAVIWAFYRRYMEKLVRLKRGFKAGLVLIFIGTLMVSVLFGNGMAMIWHGHEITWAEP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
VASVFALAFSWASAETATVLFYIAWWVHTITLLTFLVYVPQSKHAHLIAAPINVFLSKKV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCC
PGKLKKLDFDMENVDEESEEEIAFGVGKVEDFEQHQMIDFYACVECGRCTDVCPASGTGK
CCHHHHCCCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
MLSPMDIMIKVRDHLTEKGAAITGKSSWVPSYAFSGSAGNQASADKEVAATIQSSSLIGD
CCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHH
VITEEELAGCTTCRNCEDACPVNNEHVGTIIDMRRYLVMTEGKMDSDIQRAVTNIERQGN
HHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCC
PWGLSKKDRVKWRDEDESVYIPTVKELKKEDKSFEYLFWVSSMGAFDSRSQKIALAFAKL
CCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHH
MNQAGVSFAILGNTEANSGDTARRIGNEFLFQEIAEKNIKQFNKHDVKKIVTIDPHAYNI
HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEEECCCHHHH
FKNEYPDFGFEAEVYHHTQMLYDLVMSDRLKPERAINERLTYHDSCYLGRYNGVYDPPRE
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHH
ILKSIPGLELVEMNRSRENGMCCGAGGGLMWTEETTGGRINVARTEQALQVEPTMISSAC
HHHHCCCCEEEECCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCHHEECCHHHHHHH
PYCLTMLSDGTKAKEVEEDIGTMDVAEILAISVLDKEEVKTA
HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]