Click here to switch to the map view.

The map label for this gene is betI [C]

Identifier: 23100464

GI number: 23100464

Start: 3118270

End: 3118878

Strand: Reverse

Name: betI [C]

Synonym: OB3009

Alternate gene names: 23100464

Gene position: 3118878-3118270 (Counterclockwise)

Preceding gene: 23100465

Following gene: 23100463

Centisome position: 85.91

GC content: 33.99

Gene sequence:

>609_bases
ATGGCAGAAGATCGAATTCTTTCATCGGTCAAGGATCAGCAACTTGTTAGTAAGCGACGTAATCAAATAATTAAAGGTGC
CATGCGCTTGTTCCAAGAAAAAGGTTTCCATCGCACAACGACTAGAGAAATAGCGAAGGAATCAGGTTTTAGTATCGGTA
CATTATATGAATATATACGGACAAAAGAAGATGTTTTATTTTTAGTATGTGAGTCGATTCATGATCAAGTAAGAGATCGA
ATAGCAGATTCTATGGAAGTAGAAAATCCTTCGATAGAAAGTATGCGTATGGCCGTTCGATCTTTTTTCTACCTTATGGA
TGATATGCAAGATGAAATATTAATGTTGTATCAGGAGACTAAATCACTTAAAAAGGAAACAAGAGACTTTGTTTTGCAGC
AAGAAAGAGCCGTGGTTGATATAATGATAAAATTATTATCAACCTGTCTAGAAAGAAATAAACAAGATAAAGAAATATGT
CTTATTGCCAATAATATTGTTGTTGGAGGTCATATGTGGGGATTCCGGCGTTGGATCATCCAAAAAGAATTTACACTTGA
AGAATACATTGATTTACAAATGAAACATTTACAGCAACTCACTAAATAA

Upstream 100 bases:

>100_bases
AAATTTATGAAGGAACAAATGAGGTACAACGGCTGGTGATCGGTAGAATGGTAACTAAATAATGACAGAATTAAAGTAAG
GAAAGGAGGACCTCATAAAA

Downstream 100 bases:

>100_bases
AATCGTGATAATTATCCATGTGGTAAATGGCATGTTGACGAAAGGTCGAAATATGTGGATTATGGAAGTAAAAAGTTGAG
AATTAAATTTCTCAACTTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator; Transcription Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MAEDRILSSVKDQQLVSKRRNQIIKGAMRLFQEKGFHRTTTREIAKESGFSIGTLYEYIRTKEDVLFLVCESIHDQVRDR
IADSMEVENPSIESMRMAVRSFFYLMDDMQDEILMLYQETKSLKKETRDFVLQQERAVVDIMIKLLSTCLERNKQDKEIC
LIANNIVVGGHMWGFRRWIIQKEFTLEEYIDLQMKHLQQLTK

Sequences:

>Translated_202_residues
MAEDRILSSVKDQQLVSKRRNQIIKGAMRLFQEKGFHRTTTREIAKESGFSIGTLYEYIRTKEDVLFLVCESIHDQVRDR
IADSMEVENPSIESMRMAVRSFFYLMDDMQDEILMLYQETKSLKKETRDFVLQQERAVVDIMIKLLSTCLERNKQDKEIC
LIANNIVVGGHMWGFRRWIIQKEFTLEEYIDLQMKHLQQLTK
>Mature_201_residues
AEDRILSSVKDQQLVSKRRNQIIKGAMRLFQEKGFHRTTTREIAKESGFSIGTLYEYIRTKEDVLFLVCESIHDQVRDRI
ADSMEVENPSIESMRMAVRSFFYLMDDMQDEILMLYQETKSLKKETRDFVLQQERAVVDIMIKLLSTCLERNKQDKEICL
IANNIVVGGHMWGFRRWIIQKEFTLEEYIDLQMKHLQQLTK

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23994; Mature: 23863

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDRILSSVKDQQLVSKRRNQIIKGAMRLFQEKGFHRTTTREIAKESGFSIGTLYEYIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
TKEDVLFLVCESIHDQVRDRIADSMEVENPSIESMRMAVRSFFYLMDDMQDEILMLYQET
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLKKETRDFVLQQERAVVDIMIKLLSTCLERNKQDKEICLIANNIVVGGHMWGFRRWII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCHHHHHHHHHH
QKEFTLEEYIDLQMKHLQQLTK
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEDRILSSVKDQQLVSKRRNQIIKGAMRLFQEKGFHRTTTREIAKESGFSIGTLYEYIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
TKEDVLFLVCESIHDQVRDRIADSMEVENPSIESMRMAVRSFFYLMDDMQDEILMLYQET
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLKKETRDFVLQQERAVVDIMIKLLSTCLERNKQDKEICLIANNIVVGGHMWGFRRWII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCHHHHHHHHHH
QKEFTLEEYIDLQMKHLQQLTK
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA