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The map label for this gene is ysfB [H]

Identifier: 23100285

GI number: 23100285

Start: 2909745

End: 2910887

Strand: Direct

Name: ysfB [H]

Synonym: OB2830

Alternate gene names: 23100285

Gene position: 2909745-2910887 (Clockwise)

Preceding gene: 23100284

Following gene: 23100286

Centisome position: 80.15

GC content: 33.16

Gene sequence:

>1143_bases
ATGAACATCTACCATCTAGCAGACAAAATTATCAACGTAATCAAAGGATTGATAGATGAGCAAATCATCATATGTGATAC
AAATGGAATTATTATTGCGAGTACAAACCCAAATCGTATAGGTGATTATCATGAGGGATCTACAATTGTTATCAAAAATA
AACAACAACTCATGATTACTGAATCTTTAACGATAGACTTGCAAGGAGTTAAAACGGGCATTAACCTCCCCCTCTTTTTT
AATAAATCCGTCATTGGTGTTATTGGCATTACTGGAGAAATCGAAAAAGTAAAGCCGTTTGGGGAAATTGTTAGGAAGAT
GACCGAGCTGCTGATTCATGAAAATAATTATTATGAACAAATGGAGTTTGAGCATCGTGCTGTGGAGAATGTCATGTTTG
ATTTACTTCAAAGCAGAAAAATAACTCGTCCTTTATTGGATAGAGCAGAAACACTAGGTATGTCATTAGAGGGGTCCAAA
CAGGTAATTATTCTAGTAATAAACGAGATAGATTCGACCCTCCAAAAGCAAATTTGGCATTACTTAAAAGATCTTATTCC
AGAAAAAGATATCCTAACTCGTTGGGGAAATAATCGTTTGTTTTGGATGCATACACTTTCATCAATAAAAGACCAAATAA
AGCCTGACTTTTTAAATACATTGCAAAAAGCTTGTGAAAATCACTTTTCGATTGATTTGAATATAGGGGTAGGAGATACG
GCATCCGCTAGTGACTTATATCGTTCCTATGAAGAAGCACTCATTGCAATTAATTATTTTCCTGATGATACTCGTATATC
CTTTCATACAGATTTACAGTTGGAGCTCTGTCTGCAAGATATATCTGATGATACCAAAAAAGAATACATTCAGAGAACAA
TCGGTACGTTAATCGAACATAATCAATTATTACAAACCTTGCATGTATTTATAGAAAATGAATCGTCATTACAAAAAACA
GCAGAAGCATTATTCATTCACATCAATACTCTGCATTATCGGTTGTCCAAAATTCATCAATTTACCGGACTCGATCCAAA
ACGGTTTAAAGATTTAACGAATCTATATTTAGCTATTACATTTTTAGATGAACATACAATTGATTTTAAAAATCCATCAT
CTTTTTCGTATAAAAACACATAG

Upstream 100 bases:

>100_bases
TCCATCCACTGCAACCAACTTCCACTTATACCTGGAAAGTACGTTATAATAGCTGTAATTCATTCGTTGCCATCCAAGGT
TGAAAAAGGAGACAAGCACT

Downstream 100 bases:

>100_bases
AATTTTCTATGTGTTTTTATTTATACTATATAAATTGTATAAATAATTAAAGCCCGCAGGAGGTTACTAATTATGTTAGA
TAAATCAATTATTGAGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNIYHLADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMITESLTIDLQGVKTGINLPLFF
NKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQMEFEHRAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSK
QVIILVINEIDSTLQKQIWHYLKDLIPEKDILTRWGNNRLFWMHTLSSIKDQIKPDFLNTLQKACENHFSIDLNIGVGDT
ASASDLYRSYEEALIAINYFPDDTRISFHTDLQLELCLQDISDDTKKEYIQRTIGTLIEHNQLLQTLHVFIENESSLQKT
AEALFIHINTLHYRLSKIHQFTGLDPKRFKDLTNLYLAITFLDEHTIDFKNPSSFSYKNT

Sequences:

>Translated_380_residues
MNIYHLADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMITESLTIDLQGVKTGINLPLFF
NKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQMEFEHRAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSK
QVIILVINEIDSTLQKQIWHYLKDLIPEKDILTRWGNNRLFWMHTLSSIKDQIKPDFLNTLQKACENHFSIDLNIGVGDT
ASASDLYRSYEEALIAINYFPDDTRISFHTDLQLELCLQDISDDTKKEYIQRTIGTLIEHNQLLQTLHVFIENESSLQKT
AEALFIHINTLHYRLSKIHQFTGLDPKRFKDLTNLYLAITFLDEHTIDFKNPSSFSYKNT
>Mature_380_residues
MNIYHLADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMITESLTIDLQGVKTGINLPLFF
NKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQMEFEHRAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSK
QVIILVINEIDSTLQKQIWHYLKDLIPEKDILTRWGNNRLFWMHTLSSIKDQIKPDFLNTLQKACENHFSIDLNIGVGDT
ASASDLYRSYEEALIAINYFPDDTRISFHTDLQLELCLQDISDDTKKEYIQRTIGTLIEHNQLLQTLHVFIENESSLQKT
AEALFIHINTLHYRLSKIHQFTGLDPKRFKDLTNLYLAITFLDEHTIDFKNPSSFSYKNT

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=381, Percent_Identity=28.0839895013123, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 43842; Mature: 43842

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYHLADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMIT
CCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCEEEEE
ESLTIDLQGVKTGINLPLFFNKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQ
EEEEEEEEEECCCCCCEEEECCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHCCCCCHHH
MEFEHRAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSKQVIILVINEIDSTLQKQIWH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHH
YLKDLIPEKDILTRWGNNRLFWMHTLSSIKDQIKPDFLNTLQKACENHFSIDLNIGVGDT
HHHHHCCCHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCC
ASASDLYRSYEEALIAINYFPDDTRISFHTDLQLELCLQDISDDTKKEYIQRTIGTLIEH
CCHHHHHHHHHHHEEEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NQLLQTLHVFIENESSLQKTAEALFIHINTLHYRLSKIHQFTGLDPKRFKDLTNLYLAIT
HHHHHHHHHHHCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEE
FLDEHTIDFKNPSSFSYKNT
EECCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MNIYHLADKIINVIKGLIDEQIIICDTNGIIIASTNPNRIGDYHEGSTIVIKNKQQLMIT
CCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCEEEEE
ESLTIDLQGVKTGINLPLFFNKSVIGVIGITGEIEKVKPFGEIVRKMTELLIHENNYYEQ
EEEEEEEEEECCCCCCEEEECCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHCCCCCHHH
MEFEHRAVENVMFDLLQSRKITRPLLDRAETLGMSLEGSKQVIILVINEIDSTLQKQIWH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHH
YLKDLIPEKDILTRWGNNRLFWMHTLSSIKDQIKPDFLNTLQKACENHFSIDLNIGVGDT
HHHHHCCCHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCC
ASASDLYRSYEEALIAINYFPDDTRISFHTDLQLELCLQDISDDTKKEYIQRTIGTLIEH
CCHHHHHHHHHHHEEEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NQLLQTLHVFIENESSLQKTAEALFIHINTLHYRLSKIHQFTGLDPKRFKDLTNLYLAIT
HHHHHHHHHHHCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEE
FLDEHTIDFKNPSSFSYKNT
EECCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]