Click here to switch to the map view.

The map label for this gene is yiaM [C]

Identifier: 23100272

GI number: 23100272

Start: 2896864

End: 2897349

Strand: Reverse

Name: yiaM [C]

Synonym: OB2817

Alternate gene names: 23100272

Gene position: 2897349-2896864 (Counterclockwise)

Preceding gene: 23100273

Following gene: 23100271

Centisome position: 79.81

GC content: 32.92

Gene sequence:

>486_bases
ATGGAAGCAGTAAAAAAAGCTCTAGATAAAACGCTTGCAATAATTTGCATTGGATTATTCGGTTTTTTAGTATTACTCGT
TACTTGGCAAGTTTTTACTCGGTTTGTTTTGAATAACCCTAGTGTTTTTTCAGAGGAATTAGCAAAGTATTGTTTTGTAT
GGTTAGTTTTATTTGGCGCTGCGTATGTCTTCGGTGAAAGAGGACATATGGCAGTTGAATTTATCAAGAATAAATTTCCT
ACTAAGGTTAAGATGATGGTTGAGATATTAATAGAAGTTATCACAATCCTATTTGCACTAACTGTACTCTTGTATGGGGG
ATATTTAGCTGTAGATGTAGCATGGAATCAGCTTTCTGCCTCATTACAAATACCGGTAGGATATTTATACGCAGGCATAC
CGATTAGTGGTTTATTTATTGTATTCTATTGTATCTATAATATCACTAGTATTATTAAAAACAACAAAACCATAGAACAG
CTTTAG

Upstream 100 bases:

>100_bases
AAGAAGTAGAACCTCTAATCCAAGAAAAATTGACTAGTGACACTGCTAAAGAGTTATATGATGAAGTAAGAACAGCAGCT
GAATAGATGGAGTGATTTAT

Downstream 100 bases:

>100_bases
TTCTAATAGGAAGGAGATTACTATATGGATATAGCTGTTCAGGCAGGATTAATTCTTCTCGTAGGTATTGTGTTTTTACT
CATTATAGGGGTACCAATAG

Product: C4-dicarboxylate transport system permease small protein

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; C4-Dicarboxylate Transport System; TRAP Transporter DctQ-Like Membrane Protein; Aspartate Kinase Monofunctional Class; TRAP Transporter Small Transmembrane Protein; Trap-Family Transport System Permease Protein; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transport System Small Permease; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; TRAP Dicarboxylate Transporter; Inner Membrane Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MEAVKKALDKTLAIICIGLFGFLVLLVTWQVFTRFVLNNPSVFSEELAKYCFVWLVLFGAAYVFGERGHMAVEFIKNKFP
TKVKMMVEILIEVITILFALTVLLYGGYLAVDVAWNQLSASLQIPVGYLYAGIPISGLFIVFYCIYNITSIIKNNKTIEQ
L

Sequences:

>Translated_161_residues
MEAVKKALDKTLAIICIGLFGFLVLLVTWQVFTRFVLNNPSVFSEELAKYCFVWLVLFGAAYVFGERGHMAVEFIKNKFP
TKVKMMVEILIEVITILFALTVLLYGGYLAVDVAWNQLSASLQIPVGYLYAGIPISGLFIVFYCIYNITSIIKNNKTIEQ
L
>Mature_161_residues
MEAVKKALDKTLAIICIGLFGFLVLLVTWQVFTRFVLNNPSVFSEELAKYCFVWLVLFGAAYVFGERGHMAVEFIKNKFP
TKVKMMVEILIEVITILFALTVLLYGGYLAVDVAWNQLSASLQIPVGYLYAGIPISGLFIVFYCIYNITSIIKNNKTIEQ
L

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18163; Mature: 18163

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAVKKALDKTLAIICIGLFGFLVLLVTWQVFTRFVLNNPSVFSEELAKYCFVWLVLFGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AYVFGERGHMAVEFIKNKFPTKVKMMVEILIEVITILFALTVLLYGGYLAVDVAWNQLSA
HHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLQIPVGYLYAGIPISGLFIVFYCIYNITSIIKNNKTIEQL
HHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MEAVKKALDKTLAIICIGLFGFLVLLVTWQVFTRFVLNNPSVFSEELAKYCFVWLVLFGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AYVFGERGHMAVEFIKNKFPTKVKMMVEILIEVITILFALTVLLYGGYLAVDVAWNQLSA
HHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLQIPVGYLYAGIPISGLFIVFYCIYNITSIIKNNKTIEQL
HHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA