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The map label for this gene is yndD [H]

Identifier: 23100223

GI number: 23100223

Start: 2840252

End: 2841583

Strand: Reverse

Name: yndD [H]

Synonym: OB2768

Alternate gene names: 23100223

Gene position: 2841583-2840252 (Counterclockwise)

Preceding gene: 23100224

Following gene: 23100222

Centisome position: 78.27

GC content: 34.01

Gene sequence:

>1332_bases
GTGCGAAATATGGGATTTATTGATCAGGTGAAAGACTTGCAGAAAAAAAATAAAGATCTGAAAATGAGCTCTATCCATAT
GAATGGAACCCCATATGGTGTCATTGGTTTCGAAAGTTTGGTCGATTTTTCAGCTACTTGGAAAATGATTGAAACCTTAA
TACAGAATGAAGAAATACCTGTACAAGAAACGAATGTTCATGCGGAACAGTCTACATGGAAAAAAATGCGTTCCACTGAG
CAATTTAAGACACTTTATGAAGGTAAGGTAATTATTTGGAATCCTACGAAGGAAGTATCACTGATTGTAGATCCAGTATC
TCGTCCCTTATATCGAAGTATCGATGCACCAGTGAACGAGTCCATCATATACGGTGCAAGAGATGCATTTACAGAAAGCC
TTCAACAAAATATTGGATTACTACGTAGCAAGTATAAATCCAAAGAGTTGGAAGTATTATCGACTTCACATGGACAAAGA
AATCGTAAATTCTCTTTTATTGTGTTGAAGGGAACAACAAATGAAAAAATGGTACAAAAAATCAAGAAAAAAATTGACGA
ATTCCCAAATGAAATCAAACAAGTAAAAGATGTTCATGTTGCTCTTGGTTTTTCTAAATTTGATTTAGTAACTCGTGTAT
CATCGACGGAATTGCCAGAAAATGCGATGGAGTATATAGAGCAAGGAAAAGTTGTTTTCTTTATGGATGGTTATCCGTTC
GGATTGGTTTTATTTAACACGGTATTTGATATTTTTAAACAACCTAGTGATAGTAACTATTTAAGTGTGTTTGTATATGC
ACTATATGCACTTCGTATTGTTGGAATCATGCTCTCACTTCTATTACCAGGACTATATGTTGCATTAATTACCATAAATC
CTGAAATGCTAAAAATACAATTAGCATTATCTATAACAGAGAGCAGGCAATTTGTTCCGTATCCAGCATTTATAGAAATT
ATGTTTATGCTATTACTAATTGAATTAATTACGGAGGCTGCAGTTCGTTTACCTCTTTCGATATCGAATACGATTGGAAT
TGTTGGTGGTATTATTCTAGGGCAAGCAATAGTAGAGGCAAGTCTTGTGAGTGGTGTATTAATTATTGTTATAGCAGCAA
CAACAATTGCAAACGGAATTATAGTGAATTTTGAGAATGGTATCACTTTACGTCTTATGAAGTATTTCATAGTAATTTTT
TCGGCTTTGTTTGGGATTTTAGGTCATGTGATAAGCCTGTTGATTTTATGTTCCTATATTGCTCGGATTACAAATTTTGG
AGTACCATATGTCCGGTGGAAAAAGGAAGGGATTCAAAGTGAAAATCAATAA

Upstream 100 bases:

>100_bases
GTTTATTTCCGAATAACATCATTTTGAGATTAATTATGGGATTATTTTGCATGAAAAATCGCTTCCTGGTTCATAAATAA
AAGATAGGTGAAACGAAGGG

Downstream 100 bases:

>100_bases
TCTTTTGGTTATAACCTATTTCTTAATTGTGAATATCGGATTAATGTTTCTTCTATATCCAACACTCATCCTCGATACGG
TTGAAAACGGTCATTGGCTG

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MRNMGFIDQVKDLQKKNKDLKMSSIHMNGTPYGVIGFESLVDFSATWKMIETLIQNEEIPVQETNVHAEQSTWKKMRSTE
QFKTLYEGKVIIWNPTKEVSLIVDPVSRPLYRSIDAPVNESIIYGARDAFTESLQQNIGLLRSKYKSKELEVLSTSHGQR
NRKFSFIVLKGTTNEKMVQKIKKKIDEFPNEIKQVKDVHVALGFSKFDLVTRVSSTELPENAMEYIEQGKVVFFMDGYPF
GLVLFNTVFDIFKQPSDSNYLSVFVYALYALRIVGIMLSLLLPGLYVALITINPEMLKIQLALSITESRQFVPYPAFIEI
MFMLLLIELITEAAVRLPLSISNTIGIVGGIILGQAIVEASLVSGVLIIVIAATTIANGIIVNFENGITLRLMKYFIVIF
SALFGILGHVISLLILCSYIARITNFGVPYVRWKKEGIQSENQ

Sequences:

>Translated_443_residues
MRNMGFIDQVKDLQKKNKDLKMSSIHMNGTPYGVIGFESLVDFSATWKMIETLIQNEEIPVQETNVHAEQSTWKKMRSTE
QFKTLYEGKVIIWNPTKEVSLIVDPVSRPLYRSIDAPVNESIIYGARDAFTESLQQNIGLLRSKYKSKELEVLSTSHGQR
NRKFSFIVLKGTTNEKMVQKIKKKIDEFPNEIKQVKDVHVALGFSKFDLVTRVSSTELPENAMEYIEQGKVVFFMDGYPF
GLVLFNTVFDIFKQPSDSNYLSVFVYALYALRIVGIMLSLLLPGLYVALITINPEMLKIQLALSITESRQFVPYPAFIEI
MFMLLLIELITEAAVRLPLSISNTIGIVGGIILGQAIVEASLVSGVLIIVIAATTIANGIIVNFENGITLRLMKYFIVIF
SALFGILGHVISLLILCSYIARITNFGVPYVRWKKEGIQSENQ
>Mature_443_residues
MRNMGFIDQVKDLQKKNKDLKMSSIHMNGTPYGVIGFESLVDFSATWKMIETLIQNEEIPVQETNVHAEQSTWKKMRSTE
QFKTLYEGKVIIWNPTKEVSLIVDPVSRPLYRSIDAPVNESIIYGARDAFTESLQQNIGLLRSKYKSKELEVLSTSHGQR
NRKFSFIVLKGTTNEKMVQKIKKKIDEFPNEIKQVKDVHVALGFSKFDLVTRVSSTELPENAMEYIEQGKVVFFMDGYPF
GLVLFNTVFDIFKQPSDSNYLSVFVYALYALRIVGIMLSLLLPGLYVALITINPEMLKIQLALSITESRQFVPYPAFIEI
MFMLLLIELITEAAVRLPLSISNTIGIVGGIILGQAIVEASLVSGVLIIVIAATTIANGIIVNFENGITLRLMKYFIVIF
SALFGILGHVISLLILCSYIARITNFGVPYVRWKKEGIQSENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 50007; Mature: 50007

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNMGFIDQVKDLQKKNKDLKMSSIHMNGTPYGVIGFESLVDFSATWKMIETLIQNEEIP
CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCC
VQETNVHAEQSTWKKMRSTEQFKTLYEGKVIIWNPTKEVSLIVDPVSRPLYRSIDAPVNE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHCCCCCCC
SIIYGARDAFTESLQQNIGLLRSKYKSKELEVLSTSHGQRNRKFSFIVLKGTTNEKMVQK
CEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHH
IKKKIDEFPNEIKQVKDVHVALGFSKFDLVTRVSSTELPENAMEYIEQGKVVFFMDGYPF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCH
GLVLFNTVFDIFKQPSDSNYLSVFVYALYALRIVGIMLSLLLPGLYVALITINPEMLKIQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHEEEE
LALSITESRQFVPYPAFIEIMFMLLLIELITEAAVRLPLSISNTIGIVGGIILGQAIVEA
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLVSGVLIIVIAATTIANGIIVNFENGITLRLMKYFIVIFSALFGILGHVISLLILCSYI
HHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARITNFGVPYVRWKKEGIQSENQ
HHHHHCCCCCEEEEHHCCCCCCC
>Mature Secondary Structure
MRNMGFIDQVKDLQKKNKDLKMSSIHMNGTPYGVIGFESLVDFSATWKMIETLIQNEEIP
CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCC
VQETNVHAEQSTWKKMRSTEQFKTLYEGKVIIWNPTKEVSLIVDPVSRPLYRSIDAPVNE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHCCCCCCC
SIIYGARDAFTESLQQNIGLLRSKYKSKELEVLSTSHGQRNRKFSFIVLKGTTNEKMVQK
CEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHH
IKKKIDEFPNEIKQVKDVHVALGFSKFDLVTRVSSTELPENAMEYIEQGKVVFFMDGYPF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCH
GLVLFNTVFDIFKQPSDSNYLSVFVYALYALRIVGIMLSLLLPGLYVALITINPEMLKIQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHEEEE
LALSITESRQFVPYPAFIEIMFMLLLIELITEAAVRLPLSISNTIGIVGGIILGQAIVEA
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLVSGVLIIVIAATTIANGIIVNFENGITLRLMKYFIVIFSALFGILGHVISLLILCSYI
HHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARITNFGVPYVRWKKEGIQSENQ
HHHHHCCCCCEEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]