Definition Oceanobacillus iheyensis HTE831, complete genome.
Accession NC_004193
Length 3,630,528

Click here to switch to the map view.

The map label for this gene is 23100179

Identifier: 23100179

GI number: 23100179

Start: 2794158

End: 2795192

Strand: Reverse

Name: 23100179

Synonym: OB2724

Alternate gene names: NA

Gene position: 2795192-2794158 (Counterclockwise)

Preceding gene: 23100180

Following gene: 23100178

Centisome position: 76.99

GC content: 40.48

Gene sequence:

>1035_bases
ATGAAGAGGCTTTTTTTATTCTTTTTAGTATTAGGTTTACCGTTGTTTCTGCTTATAGCTTGTGCAGATGGGGGAGATAG
TGGCGATGGTGATAATGGTGGAGGCGATAGTATCACGTTGTATTCACCGGAGACACCTGATTTGACGAAGCAGCTTGCAC
AAAAATATGAAGAAGTTCATGGCGGTAAGGTGAATGTGCATTATGCAGGAACGAATGTATTGGTGAATCAAATGATGGCG
GAGAAGGGTAATCCGCAAGCGGACGTTTGGTATGGAGGTGGAGGGATCCTTCCATTCGAATCTGCAGTAGATAAAGAAAT
TATTACTTCTTTTATTCCGGAAAGTGCTGAAGACTGGGAAGTTATTGAAAACGGTATCAAAATGAAGCATCAGGATGGGT
ATTATACAGGGGTAGAATTATTCGTACTGGGATTTTCATATAATGCCGACCTTGTTTCCGAAGAAGAAGCTCCTAAGACT
TGGGAAGATTTGTTGGATCCGAAATGGGAAGGAAAGATTCAATTTCCTAATCCAGCAGCATCTGGTACATCCACACTGAT
GGTGCTTAGTTATATGATGCAATATGGTGAAGAAGAAGGATGGGAATATTTTCAAAAACTAAAGGATCAAGCAAATTCAA
TTCCGGATTCTGGTTCTGCGCCTACAAAAGCTGTAGCGATGGGAGAAGCGCATGTTGCGGTTGGGTTTGATTTTATGGCA
TATGAACACCAAGCGAATGGAGAGACTGTTGACTTTATTGTTCCAGATAAAACGCCAATACTGTCTAATCCAATGACACT
AGTAAAAGATGGACCAAATCCTGAAGGCGGGCAGAAATTTATGGAGTTTATGCTGAGTGAGGATGCACAGCAAATTCTTG
CGGACTGGTATCATATTCCGATTAATCCAGACATCGAATCGAAGACACCTTTGTCCGTTGATAATATTAGTAATCATGCG
GTAGAACTTGATATCGACTGGGTGAATGAAAATTATGATCGAATACGAAATGAATGGAATAGCAAAATTAAGTAA

Upstream 100 bases:

>100_bases
TGACGAGAGAAGATTAAATTTTCCCCTTATATTTTAGGGATTATTTGGTCTTTTCTCTTTTTTTATGAGATATAAATATA
GCAAGAGGGGGTTGTCTTAT

Downstream 100 bases:

>100_bases
AGGATGATCAATCATGGGGGCAGTTTTTCTAGAGAATGTGCGAAAGGATTTTGGTAAAGTAACGGTACTTAAAAATATAA
ATTTGGATATTAAAGAGGGT

Product: AfuA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVHGGKVNVHYAGTNVLVNQMMA
EKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWEVIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKT
WEDLLDPKWEGKIQFPNPAASGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA
YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIPINPDIESKTPLSVDNISNHA
VELDIDWVNENYDRIRNEWNSKIK

Sequences:

>Translated_344_residues
MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVHGGKVNVHYAGTNVLVNQMMA
EKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWEVIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKT
WEDLLDPKWEGKIQFPNPAASGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA
YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIPINPDIESKTPLSVDNISNHA
VELDIDWVNENYDRIRNEWNSKIK
>Mature_344_residues
MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVHGGKVNVHYAGTNVLVNQMMA
EKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWEVIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKT
WEDLLDPKWEGKIQFPNPAASGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA
YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIPINPDIESKTPLSVDNISNHA
VELDIDWVNENYDRIRNEWNSKIK

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 38208; Mature: 38208

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
GGKVNVHYAGTNVLVNQMMAEKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWE
CCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKTWEDLLDPKWEGKIQFPNPAA
HHHHCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCC
SGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECEEEEE
YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIP
EEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECC
INPDIESKTPLSVDNISNHAVELDIDWVNENYDRIRNEWNSKIK
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
GGKVNVHYAGTNVLVNQMMAEKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWE
CCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKTWEDLLDPKWEGKIQFPNPAA
HHHHCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCC
SGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECEEEEE
YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIP
EEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECC
INPDIESKTPLSVDNISNHAVELDIDWVNENYDRIRNEWNSKIK
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]