| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
Click here to switch to the map view.
The map label for this gene is hexR [C]
Identifier: 23100165
GI number: 23100165
Start: 2780213
End: 2781043
Strand: Reverse
Name: hexR [C]
Synonym: OB2710
Alternate gene names: 23100165
Gene position: 2781043-2780213 (Counterclockwise)
Preceding gene: 23100170
Following gene: 23100164
Centisome position: 76.6
GC content: 34.06
Gene sequence:
>831_bases ATGAACCGAGAATATGTAGAAAGAACAAAAACGAATCTCCCAGAAATGACTAAAGGATTAAAAAAAGTAGGGAGATATCT GTTAGCCGAGCCGATCGTATTTGCCATACACCCAGCTAAAAAAGTAGGCAGTATGATAGACGTAAGTGAAACAATGGTGA TACGATTTTGTCATTTTATAGGATATCGAGGATATGCAGATCTACAAAAAGAAGTGAGACATCATTTAATAAGTCTAGAA AATAGCAACGATAAGAAGAATGTTTCCACGAAAGAATCTAATTTTGAACAATTTATAGAAGAAGATGTTAAGAATTTAAA GCAGATGAAGAATATAATAGATGTAGATGTATTAAACGATGTTATAGAGAGGATTCTAGATAGTGAGAAAGTTATAGTTG CAGGCTACTATCATTCTTTCAGTTTTGCGCATTGGTTTTCATTTAATTTGAATTACATTGTAGGGAATGCTTCTTTATTT CGACCAGAAAGCGATGCAGGGATACTCGAATTAATGCCTAAAAAATCTTGTATCATTATTTTCTCTTTCTTCCGCTATGC AATAGACACGATTCGTTTAGCGGAAGAAGCTAAGAAAAAAGGGGTTCCTGTAATCGTAATTACTGATTCATGGGCATCGC CTGCAGCCGAATATGCTGATTTTGTTATTTCGATTTACTCATCGGATAATTCGAATGTTCTGTTACAAAAAGGACCAATA ACCATGTCTCTGATGAATTCAATCTTATCTAAATTGATCGATCAGGTTCAAGATCGAGGTAAAATATTACCGACATTTAA GTATTATATAAAGGACGGGGAAGATGAATGA
Upstream 100 bases:
>100_bases TTATTTAAAAAATCTAAATATTTTAAGTTGAAATAAATTATAATAAAGTTTATACTTTAAAGCAATACAAAATATTGGAA AAACTTTAAAGGTGACGTTT
Downstream 100 bases:
>100_bases CAACGAGTATTGAACAAAGAGTAAGAGATGTGTTTCATTATTTACACCAACATCCTGAAATTAGTTGGGAAGAGGTGGAA ACTACCAAGTATATCAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; RpiR-Family Transcriptional Regulator; Transcriptional Regulator Rpir Family; Transcription Regulator Protein; Sugar Isomerase; Helix-Turn-Helix Protein RpiR; N-Acetylmannosamine Kinase; N-Acylmannosamine Kinase; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; Transcriptional Regulator RpiR Family SIS Domain; Transcription Regulator; Transcriptional Regulator Family Protein; SIS Domain-Containing Protein; HTH/SIS Domain-Containing Protein; Sugar Isomerase Family Protein; Transcriptional Regulator IolR; Helix-Turn-Helix Domain RpiR Family
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNREYVERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFIGYRGYADLQKEVRHHLISLE NSNDKKNVSTKESNFEQFIEEDVKNLKQMKNIIDVDVLNDVIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLF RPESDAGILELMPKKSCIIIFSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNVLLQKGPI TMSLMNSILSKLIDQVQDRGKILPTFKYYIKDGEDE
Sequences:
>Translated_276_residues MNREYVERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFIGYRGYADLQKEVRHHLISLE NSNDKKNVSTKESNFEQFIEEDVKNLKQMKNIIDVDVLNDVIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLF RPESDAGILELMPKKSCIIIFSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNVLLQKGPI TMSLMNSILSKLIDQVQDRGKILPTFKYYIKDGEDE >Mature_276_residues MNREYVERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFIGYRGYADLQKEVRHHLISLE NSNDKKNVSTKESNFEQFIEEDVKNLKQMKNIIDVDVLNDVIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLF RPESDAGILELMPKKSCIIIFSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNVLLQKGPI TMSLMNSILSKLIDQVQDRGKILPTFKYYIKDGEDE
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31613; Mature: 31613
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNREYVERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFI CCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCHHHHHHHHHHHHHHHH GYRGYADLQKEVRHHLISLENSNDKKNVSTKESNFEQFIEEDVKNLKQMKNIIDVDVLND CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLFRPESDAGILELMPKKSCIII HHHHHHCCCCEEEEEEHHHHHHHHEEEEEEEEEEECCEEECCCCCCCCEEECCCCCHHHH FSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNVLLQKGPI HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHEEEEEECCCCEEEEEECCC TMSLMNSILSKLIDQVQDRGKILPTFKYYIKDGEDE HHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCC >Mature Secondary Structure MNREYVERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFI CCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCHHHHHHHHHHHHHHHH GYRGYADLQKEVRHHLISLENSNDKKNVSTKESNFEQFIEEDVKNLKQMKNIIDVDVLND CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLFRPESDAGILELMPKKSCIII HHHHHHCCCCEEEEEEHHHHHHHHEEEEEEEEEEECCEEECCCCCCCCEEECCCCCHHHH FSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNVLLQKGPI HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHEEEEEECCCCEEEEEECCC TMSLMNSILSKLIDQVQDRGKILPTFKYYIKDGEDE HHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA