| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is pgm
Identifier: 23099890
GI number: 23099890
Start: 2489858
End: 2491396
Strand: Reverse
Name: pgm
Synonym: OB2435
Alternate gene names: 23099890
Gene position: 2491396-2489858 (Counterclockwise)
Preceding gene: 23099891
Following gene: 23099889
Centisome position: 68.62
GC content: 36.06
Gene sequence:
>1539_bases ATGAGTCAGAATAAATTAGCTGCATTAATTATTCTTGATGGATTCGCTATTCGTGATGAAGTAAAAGGAAATGCAGTCAA ACAAGCAAACACCCCTAATTTTGATCGTTTTTGGAATCAATATGCTCATAATCAATTAGAGGCTTCTGGAAAGGCTGTTG GATTACCAGATGGGCAAATGGGGAATTCCGAAGTTGGTCATTTGAATATTGGTGCTGGTCGTATTGTGTATCAAAGCCTT ACTCGTGTAAATGTGTCTATTGACGAAGGTGATTTCTATGAGGTTGATGCGTTCATTAAATCTGTAGAACATGCAAAGAA ACATGACAAAGCGCTTCACTTATTTGGTTTATTATCTGACGGTGGTGTGCATAGTCATATTAATCATTTATTTGCTTTAC TTCGATTAGCGAAGAAACATGAATTAGAAAATGTATTTGTACATGCTTTCTTAGACGGACGTGATGTTGGTCCGAAAACA GCGAGCAAATATATCAAAGAAACACAAGATGTGATGGATGAACTTGGTGTTGGTCAATTCGCTACTATATCTGGTCGTTA CTATTCCATGGATCGTGACAAACGTTGGGACCGTGTAAAGAAATGTTATGACGCAATGGTATACGGTGAAGGTCCATCAT ATAAAAGTGCACAAGAAGTTGTAGATGATAACTATGCAAATGAAATTTATGATGAGTTTGTAATTCCTTCTGTAATTACA GATGACAATGATGAACCAGTGGCTACGATTAAGGATGAAGATTCTATTATCTTCTATAATTTCCGTCCTGATCGTGCGAT ACAAATCTCTAGAACATTTGCGAATGAGGATTTTCGTGACTTTGAGCGAGGCGATAAAGCTCCAAAAAAACTAGACTTTG TAATGCTGACAAACTTTAGTGAAACAGTAGATGGATATGTTGCGTATCAACCAGTCAATCTAGATAATACTGTTGGAGAA GTTCTAGCACAAAATAATTTGAATCAATTACGTATTGCAGAAACGGAGAAATATCCACACGTTACTTTCTTTATGAGTGG TGGACGCGAAAAAGAATTCCCTGGTGAAAAAAGGATTTTAATTGACTCACCCAAAGTAGCAACCTATGATCTGAAACCTG AAATGAGTGTATATGAAGTTACTGATGCACTGTTAAAGGAATTAGATAAAGGGGAGCAGAATGCGATTATCTTGAATTTT GCTAATCCAGATATGGTTGGACATTCAGGGAAATTACAACCAACTATTGATGCTATTGAAGCAGTGGATGAATGTTTAGG TAAGGTAATTGATAAAATTACTGAATTAGGTGGTCATGCCATAATAACTGCAGATCACGGCAACTCTGATGAAGTTATGA CTTTGGAAGATAAACCAATGACAGCTCACACAACTAACCCTGTACCTGTTATTGTAACCAAAGATGATATTGAGTTACGT GATGGTGGAATTTTAGCAGATTTATCACCAACACTGCTTGATTTATTAAATGTTGAAAAACCAAAAGAAATGACTGGCAA TAGTCTTATAAAAAAATAA
Upstream 100 bases:
>100_bases TGGATGAGTTATTAGCTCAATCTGATATTGACGGAGCATTAGTTGGTGGGGCAAGTCTCGATCCTGAATCATTCCTACAA CTAGTGGAGGCAGGTACAAA
Downstream 100 bases:
>100_bases TAAAACAATAAGGAGAGAATAATATGCCATATATTACAGATGTTTATGCTAGAGAAGTCTTAGATTCAAGAGGTAACCCA ACCATTGAAGTTGAAATTTT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSQNKLAALIILDGFAIRDEVKGNAVKQANTPNFDRFWNQYAHNQLEASGKAVGLPDGQMGNSEVGHLNIGAGRIVYQSL TRVNVSIDEGDFYEVDAFIKSVEHAKKHDKALHLFGLLSDGGVHSHINHLFALLRLAKKHELENVFVHAFLDGRDVGPKT ASKYIKETQDVMDELGVGQFATISGRYYSMDRDKRWDRVKKCYDAMVYGEGPSYKSAQEVVDDNYANEIYDEFVIPSVIT DDNDEPVATIKDEDSIIFYNFRPDRAIQISRTFANEDFRDFERGDKAPKKLDFVMLTNFSETVDGYVAYQPVNLDNTVGE VLAQNNLNQLRIAETEKYPHVTFFMSGGREKEFPGEKRILIDSPKVATYDLKPEMSVYEVTDALLKELDKGEQNAIILNF ANPDMVGHSGKLQPTIDAIEAVDECLGKVIDKITELGGHAIITADHGNSDEVMTLEDKPMTAHTTNPVPVIVTKDDIELR DGGILADLSPTLLDLLNVEKPKEMTGNSLIKK
Sequences:
>Translated_512_residues MSQNKLAALIILDGFAIRDEVKGNAVKQANTPNFDRFWNQYAHNQLEASGKAVGLPDGQMGNSEVGHLNIGAGRIVYQSL TRVNVSIDEGDFYEVDAFIKSVEHAKKHDKALHLFGLLSDGGVHSHINHLFALLRLAKKHELENVFVHAFLDGRDVGPKT ASKYIKETQDVMDELGVGQFATISGRYYSMDRDKRWDRVKKCYDAMVYGEGPSYKSAQEVVDDNYANEIYDEFVIPSVIT DDNDEPVATIKDEDSIIFYNFRPDRAIQISRTFANEDFRDFERGDKAPKKLDFVMLTNFSETVDGYVAYQPVNLDNTVGE VLAQNNLNQLRIAETEKYPHVTFFMSGGREKEFPGEKRILIDSPKVATYDLKPEMSVYEVTDALLKELDKGEQNAIILNF ANPDMVGHSGKLQPTIDAIEAVDECLGKVIDKITELGGHAIITADHGNSDEVMTLEDKPMTAHTTNPVPVIVTKDDIELR DGGILADLSPTLLDLLNVEKPKEMTGNSLIKK >Mature_511_residues SQNKLAALIILDGFAIRDEVKGNAVKQANTPNFDRFWNQYAHNQLEASGKAVGLPDGQMGNSEVGHLNIGAGRIVYQSLT RVNVSIDEGDFYEVDAFIKSVEHAKKHDKALHLFGLLSDGGVHSHINHLFALLRLAKKHELENVFVHAFLDGRDVGPKTA SKYIKETQDVMDELGVGQFATISGRYYSMDRDKRWDRVKKCYDAMVYGEGPSYKSAQEVVDDNYANEIYDEFVIPSVITD DNDEPVATIKDEDSIIFYNFRPDRAIQISRTFANEDFRDFERGDKAPKKLDFVMLTNFSETVDGYVAYQPVNLDNTVGEV LAQNNLNQLRIAETEKYPHVTFFMSGGREKEFPGEKRILIDSPKVATYDLKPEMSVYEVTDALLKELDKGEQNAIILNFA NPDMVGHSGKLQPTIDAIEAVDECLGKVIDKITELGGHAIITADHGNSDEVMTLEDKPMTAHTTNPVPVIVTKDDIELRD GGILADLSPTLLDLLNVEKPKEMTGNSLIKK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family
Homologues:
Organism=Escherichia coli, GI1790041, Length=513, Percent_Identity=46.588693957115, Blast_Score=471, Evalue=1e-134, Organism=Caenorhabditis elegans, GI32564249, Length=513, Percent_Identity=38.401559454191, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17507741, Length=513, Percent_Identity=38.401559454191, Blast_Score=394, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMI_OCEIH (P59174)
Other databases:
- EMBL: BA000028 - RefSeq: NP_693356.1 - ProteinModelPortal: P59174 - SMR: P59174 - GeneID: 1017222 - GenomeReviews: BA000028_GR - KEGG: oih:OB2435 - NMPDR: fig|221109.1.peg.2432 - HOGENOM: HBG613255 - OMA: DHGNAEL - ProtClustDB: PRK05434 - BioCyc: OIHE221109:OB2435-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_01038 - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 - Gene3D: G3DSA:3.40.720.10 - Gene3D: G3DSA:3.40.1450.10 - PIRSF: PIRSF001492 - TIGRFAMs: TIGR01307
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N
EC number: =5.4.2.1
Molecular weight: Translated: 57179; Mature: 57048
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: ACT_SITE 63-63
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNKLAALIILDGFAIRDEVKGNAVKQANTPNFDRFWNQYAHNQLEASGKAVGLPDGQM CCCCCEEEEEEECCEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCC GNSEVGHLNIGAGRIVYQSLTRVNVSIDEGDFYEVDAFIKSVEHAKKHDKALHLFGLLSD CCCCCCEEECCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECC GGVHSHINHLFALLRLAKKHELENVFVHAFLDGRDVGPKTASKYIKETQDVMDELGVGQF CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCE ATISGRYYSMDRDKRWDRVKKCYDAMVYGEGPSYKSAQEVVDDNYANEIYDEFVIPSVIT EEECCEEEECCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEE DDNDEPVATIKDEDSIIFYNFRPDRAIQISRTFANEDFRDFERGDKAPKKLDFVMLTNFS CCCCCCEEEEECCCCEEEEEECCCCEEEEEEHHCCCCHHHHHHCCCCCCCEEEEEEECCC ETVDGYVAYQPVNLDNTVGEVLAQNNLNQLRIAETEKYPHVTFFMSGGREKEFPGEKRIL CCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE IDSPKVATYDLKPEMSVYEVTDALLKELDKGEQNAIILNFANPDMVGHSGKLQPTIDAIE EECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH AVDECLGKVIDKITELGGHAIITADHGNSDEVMTLEDKPMTAHTTNPVPVIVTKDDIELR HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEECCCCEEEEEECCCCEEC DGGILADLSPTLLDLLNVEKPKEMTGNSLIKK CCCEEECCCHHHHHHHCCCCCHHHCCHHHCCC >Mature Secondary Structure SQNKLAALIILDGFAIRDEVKGNAVKQANTPNFDRFWNQYAHNQLEASGKAVGLPDGQM CCCCEEEEEEECCEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCC GNSEVGHLNIGAGRIVYQSLTRVNVSIDEGDFYEVDAFIKSVEHAKKHDKALHLFGLLSD CCCCCCEEECCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECC GGVHSHINHLFALLRLAKKHELENVFVHAFLDGRDVGPKTASKYIKETQDVMDELGVGQF CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCE ATISGRYYSMDRDKRWDRVKKCYDAMVYGEGPSYKSAQEVVDDNYANEIYDEFVIPSVIT EEECCEEEECCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEE DDNDEPVATIKDEDSIIFYNFRPDRAIQISRTFANEDFRDFERGDKAPKKLDFVMLTNFS CCCCCCEEEEECCCCEEEEEECCCCEEEEEEHHCCCCHHHHHHCCCCCCCEEEEEEECCC ETVDGYVAYQPVNLDNTVGEVLAQNNLNQLRIAETEKYPHVTFFMSGGREKEFPGEKRIL CCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE IDSPKVATYDLKPEMSVYEVTDALLKELDKGEQNAIILNFANPDMVGHSGKLQPTIDAIE EECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH AVDECLGKVIDKITELGGHAIITADHGNSDEVMTLEDKPMTAHTTNPVPVIVTKDDIELR HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEECCCCEEEEEECCCCEEC DGGILADLSPTLLDLLNVEKPKEMTGNSLIKK CCCEEECCCHHHHHHHCCCCCHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12235376