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The map label for this gene is sufD [H]

Identifier: 23099834

GI number: 23099834

Start: 2431572

End: 2432882

Strand: Reverse

Name: sufD [H]

Synonym: OB2379

Alternate gene names: 23099834

Gene position: 2432882-2431572 (Counterclockwise)

Preceding gene: 23099835

Following gene: 23099833

Centisome position: 67.01

GC content: 36.0

Gene sequence:

>1311_bases
ATGACTGTAGAAACAAAACTTCCATTCAATCAAGATTATATAAACCAATTTTCAGAAGATCGTAATGAGCCAGAATGGAT
GACGAAATTACGTTCAAGCGCTTTAGGTATGGTTGACTCATTAGATATGCCAAAGCCGGATAAAACAAAAATCACAAATT
GGAACTTTACAGAGTTCAAACATGAATATAAAGAAGAAAAAACAATTTCTTCTCTATCTGAATTACCGGAAGAACTAAAA
GATTATTTCGATAACGAAAACAAGCCTAATAACTTGCTTATTCAACGAAATCAATCTGTTGCTTATAGTACATTACAAGA
TGACTTAGCATCAAAAGGTGTTATTTTTACAGATATCTTTACTGCAATGCGTGATTATAGTGATCTTGTAGAAAAGTATT
ATATGAAAGATGCTGTTGCAGTTGATCAAAATAAATTAACCGCACTACATGCAGCATTAGTAAATGGTGGTATTTTCGTA
TACGTTCCAAAAAATGTACAAATTGAAGAGCCGTTACAGGCGGTCTTTTGGCAAGAAGATGCAGACAATGCTTTATTTAA
TCATGTGTTAGTAGTTGCTGAAGAAGGTAGCTCTGTAACTTATGTAGAGAACTATTTATCTCACAATGACGAGCAAGCTT
CTGTTGCAAATATTATTACTGAAGTATTTGCACATGATAATGCACAGGTTGCATATGGAGCTGTAGATAATTTTGCTGCA
GGTACTACTACGTATGTAAATCGTCGCGGAGTTGGACATCGTGACGCTCAAATAAATTGGGCACTTGGTCAAATGAATGA
TGGTAATACCGTTTCAGAAAACATTACGTATCTATTAGGAGATAACGCAACTTCTGAAGCAAAAGCAGTTTCTGTAGGAC
GTGGAAAACAAACGCAAAACTTCACATCAAGTATCCGCCAATATGGTAAACAAACAGATGCTTATATCCTTCAGCGCGGA
GTAATGAAAGGTGCAGCTTCCACTATCTTTAATGCAATTGGTAAAATTGAACATGGTGGTACGAAGTCTAATTCAGAACA
AGAATCTAGAGTCCTTATGTTAAGTGAAAAAGCACGCGGAGATGCAAATCCAATTCTTCTTATAGATGAAGATGATGTAA
CTGCTGGGCATGCAGCTTCTGTAGGCCGTGTGGATCCAATTCAAATGTTCTATTTGATGAGTCGTGGACTTAAACAAGAA
GAAGCAGAGCGTCTTGTTATTCATGGTTTCCTTGCACCAGTAGTATCACAGATCCCGATTGAATCTGTTCGTAAACAATT
AACGCAAGTAATTGAAAGGAAAGTTTATTAA

Upstream 100 bases:

>100_bases
GCAAAACGTCTTGAGGCAGAAGGTTATGAGTGGATTAAAGAAGAATTAGGTATTGAAGACGAAACCATTGAACAAAATGC
GTAATGTAAGGAGGGATAGC

Downstream 100 bases:

>100_bases
TGGATGTAAATGCCATTAAACAACAATTTCCGATTTTAAATCAAGAAGTAAATGGACATCCACTTGTATACTTGGATTCC
TCTGCAACATCTCAAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTVETKLPFNQDYINQFSEDRNEPEWMTKLRSSALGMVDSLDMPKPDKTKITNWNFTEFKHEYKEEKTISSLSELPEELK
DYFDNENKPNNLLIQRNQSVAYSTLQDDLASKGVIFTDIFTAMRDYSDLVEKYYMKDAVAVDQNKLTALHAALVNGGIFV
YVPKNVQIEEPLQAVFWQEDADNALFNHVLVVAEEGSSVTYVENYLSHNDEQASVANIITEVFAHDNAQVAYGAVDNFAA
GTTTYVNRRGVGHRDAQINWALGQMNDGNTVSENITYLLGDNATSEAKAVSVGRGKQTQNFTSSIRQYGKQTDAYILQRG
VMKGAASTIFNAIGKIEHGGTKSNSEQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQMFYLMSRGLKQE
EAERLVIHGFLAPVVSQIPIESVRKQLTQVIERKVY

Sequences:

>Translated_436_residues
MTVETKLPFNQDYINQFSEDRNEPEWMTKLRSSALGMVDSLDMPKPDKTKITNWNFTEFKHEYKEEKTISSLSELPEELK
DYFDNENKPNNLLIQRNQSVAYSTLQDDLASKGVIFTDIFTAMRDYSDLVEKYYMKDAVAVDQNKLTALHAALVNGGIFV
YVPKNVQIEEPLQAVFWQEDADNALFNHVLVVAEEGSSVTYVENYLSHNDEQASVANIITEVFAHDNAQVAYGAVDNFAA
GTTTYVNRRGVGHRDAQINWALGQMNDGNTVSENITYLLGDNATSEAKAVSVGRGKQTQNFTSSIRQYGKQTDAYILQRG
VMKGAASTIFNAIGKIEHGGTKSNSEQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQMFYLMSRGLKQE
EAERLVIHGFLAPVVSQIPIESVRKQLTQVIERKVY
>Mature_435_residues
TVETKLPFNQDYINQFSEDRNEPEWMTKLRSSALGMVDSLDMPKPDKTKITNWNFTEFKHEYKEEKTISSLSELPEELKD
YFDNENKPNNLLIQRNQSVAYSTLQDDLASKGVIFTDIFTAMRDYSDLVEKYYMKDAVAVDQNKLTALHAALVNGGIFVY
VPKNVQIEEPLQAVFWQEDADNALFNHVLVVAEEGSSVTYVENYLSHNDEQASVANIITEVFAHDNAQVAYGAVDNFAAG
TTTYVNRRGVGHRDAQINWALGQMNDGNTVSENITYLLGDNATSEAKAVSVGRGKQTQNFTSSIRQYGKQTDAYILQRGV
MKGAASTIFNAIGKIEHGGTKSNSEQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQMFYLMSRGLKQEE
AERLVIHGFLAPVVSQIPIESVRKQLTQVIERKVY

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=444, Percent_Identity=23.6486486486486, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1787971, Length=272, Percent_Identity=23.5294117647059, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 48791; Mature: 48660

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVETKLPFNQDYINQFSEDRNEPEWMTKLRSSALGMVDSLDMPKPDKTKITNWNFTEFK
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCEECCCCHHHHH
HEYKEEKTISSLSELPEELKDYFDNENKPNNLLIQRNQSVAYSTLQDDLASKGVIFTDIF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
TAMRDYSDLVEKYYMKDAVAVDQNKLTALHAALVNGGIFVYVPKNVQIEEPLQAVFWQED
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC
ADNALFNHVLVVAEEGSSVTYVENYLSHNDEQASVANIITEVFAHDNAQVAYGAVDNFAA
CCHHHHHEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
GTTTYVNRRGVGHRDAQINWALGQMNDGNTVSENITYLLGDNATSEAKAVSVGRGKQTQN
CCHHHHHCCCCCCCCCEEEEEEECCCCCCCHHCCCEEEECCCCCCCHHHEECCCCCCHHH
FTSSIRQYGKQTDAYILQRGVMKGAASTIFNAIGKIEHGGTKSNSEQESRVLMLSEKARG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCC
DANPILLIDEDDVTAGHAASVGRVDPIQMFYLMSRGLKQEEAERLVIHGFLAPVVSQIPI
CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH
ESVRKQLTQVIERKVY
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVETKLPFNQDYINQFSEDRNEPEWMTKLRSSALGMVDSLDMPKPDKTKITNWNFTEFK
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCEECCCCHHHHH
HEYKEEKTISSLSELPEELKDYFDNENKPNNLLIQRNQSVAYSTLQDDLASKGVIFTDIF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
TAMRDYSDLVEKYYMKDAVAVDQNKLTALHAALVNGGIFVYVPKNVQIEEPLQAVFWQED
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC
ADNALFNHVLVVAEEGSSVTYVENYLSHNDEQASVANIITEVFAHDNAQVAYGAVDNFAA
CCHHHHHEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
GTTTYVNRRGVGHRDAQINWALGQMNDGNTVSENITYLLGDNATSEAKAVSVGRGKQTQN
CCHHHHHCCCCCCCCCEEEEEEECCCCCCCHHCCCEEEECCCCCCCHHHEECCCCCCHHH
FTSSIRQYGKQTDAYILQRGVMKGAASTIFNAIGKIEHGGTKSNSEQESRVLMLSEKARG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCC
DANPILLIDEDDVTAGHAASVGRVDPIQMFYLMSRGLKQEEAERLVIHGFLAPVVSQIPI
CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH
ESVRKQLTQVIERKVY
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]