Click here to switch to the map view.

The map label for this gene is yugI [H]

Identifier: 23099790

GI number: 23099790

Start: 2390486

End: 2390854

Strand: Direct

Name: yugI [H]

Synonym: OB2335

Alternate gene names: 23099790

Gene position: 2390486-2390854 (Clockwise)

Preceding gene: 23099789

Following gene: 23099791

Centisome position: 65.84

GC content: 33.06

Gene sequence:

>369_bases
ATGACTAACAAATTAGAAGCTGGTCAGATTATAGAAGGTAAAGTAACAGGAATTCAGCCATATGGAGCATTTGTTTCTGT
AGACGAAGAAACACAAGGCTTAGTTCACATCTCTGAGATTACTCATGGATATGTAAAAGACATTAATGAACATTTGTCTG
TTGGAGATGAAGTGAAAGTAAAAGTTATTAATGTAGATGAAGAAAGAAATAAAGTATCTCTTTCTATTCGTGCTACAGAA
GAAGCTCCAAAAGCTACTACAGAAAAACCAAAAAAGCAAGCTGCTTCTACTCAGTCTAATGATACAGCAGGATTTAATAC
GTTAAAAGACAAGCTACAAGAATGGATTAATCAATCCGAAAAAAAATAA

Upstream 100 bases:

>100_bases
CAAATTGGTGATTATCAGCTTTGCTGATTTTTTCAAAGTATGTTATAGTATTTTATTGTGTTCAAAGAATCGAATATATA
AGATATAGGAGTTGTTCAGC

Downstream 100 bases:

>100_bases
TGGTATGTAAAGACTCTACATTTTTATGATGTAGAGTCTTTTTCATTTGTAAAGGGCTTGTTCTTGATTTCACATACCGT
ATCGCTTAAAGTTAAATTAT

Product: general stress protein 13

Products: NA

Alternate protein names: GSP13 [H]

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTNKLEAGQIIEGKVTGIQPYGAFVSVDEETQGLVHISEITHGYVKDINEHLSVGDEVKVKVINVDEERNKVSLSIRATE
EAPKATTEKPKKQAASTQSNDTAGFNTLKDKLQEWINQSEKK

Sequences:

>Translated_122_residues
MTNKLEAGQIIEGKVTGIQPYGAFVSVDEETQGLVHISEITHGYVKDINEHLSVGDEVKVKVINVDEERNKVSLSIRATE
EAPKATTEKPKKQAASTQSNDTAGFNTLKDKLQEWINQSEKK
>Mature_121_residues
TNKLEAGQIIEGKVTGIQPYGAFVSVDEETQGLVHISEITHGYVKDINEHLSVGDEVKVKVINVDEERNKVSLSIRATEE
APKATTEKPKKQAASTQSNDTAGFNTLKDKLQEWINQSEKK

Specific function: Unknown

COG id: COG1098

COG function: function code J; Predicted RNA binding protein (contains ribosomal protein S1 domain)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082262, Length=79, Percent_Identity=41.7721518987342, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI145693187, Length=83, Percent_Identity=42.1686746987952, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 13480; Mature: 13349

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKLEAGQIIEGKVTGIQPYGAFVSVDEETQGLVHISEITHGYVKDINEHLSVGDEVKV
CCCCCCCCCEECCEECCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEE
KVINVDEERNKVSLSIRATEEAPKATTEKPKKQAASTQSNDTAGFNTLKDKLQEWINQSE
EEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
KK
CC
>Mature Secondary Structure 
TNKLEAGQIIEGKVTGIQPYGAFVSVDEETQGLVHISEITHGYVKDINEHLSVGDEVKV
CCCCCCCCEECCEECCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEE
KVINVDEERNKVSLSIRATEEAPKATTEKPKKQAASTQSNDTAGFNTLKDKLQEWINQSE
EEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 9298659 [H]