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The map label for this gene is yqfA [C]

Identifier: 23099720

GI number: 23099720

Start: 2307780

End: 2308421

Strand: Reverse

Name: yqfA [C]

Synonym: OB2265

Alternate gene names: 23099720

Gene position: 2308421-2307780 (Counterclockwise)

Preceding gene: 23099722

Following gene: 23099719

Centisome position: 63.58

GC content: 33.02

Gene sequence:

>642_bases
TTGGCAAATACACATATTTTTACAAAAGGAGAGGAGATTGCAAATGCAATAACTCATGGTATTGCAGCTTTATTAAGTGT
AGCTGGGTTAGTTGTGTTGATTGTTTCATCAGTATTTAATGGAACAGCATTACATGTTGTTACATTTACTATATTTGGTG
CGACTATGGTGATCTTATATACTTCTTCGACATTTGTACATGCTCTACCAAAAGGGAAGGCAAAAGATATATTTGAGATA
CTTGATCATTCTTCCATTTACTTATTTATAGCTGGGACATACACCCCATTTACACTTCTAGTCATTCAAGGAGCAATGGG
TTGGAGTATATTTGGTGTGGTGTGGGGGATAGCGTTATTTGGAATTGTATTTAAAATATATTTTGTAAAAAGGTTTCTAT
TTACCTCTACATTACTATATATATCTATGGGCTGGTTAATTGTAATAGGATGGACACAAATAACAAATAACTTAGAAAGT
AGTGGGGTGTATCTTCTCGTCGCAGGGGGATTATGCTATACATTAGGAACGATTTTTTATATGTGGAGAGGTTTTAAATT
TCATCATATGATTTGGCACTTATTTGTTATTGCGGGTACAATTTTTCATTACTTTTGTGTACTATTCTTTTTACTACCAT
AA

Upstream 100 bases:

>100_bases
TTAGAAAAAAATATACATACGATTTTATTCGCTTTTTCTTTTTTGAACATGTAATATTTTACAGTAGATGAATTATTGTT
TGGAAAGAAGGATGGTTAAA

Downstream 100 bases:

>100_bases
AATATCATAAAATACTCTTTGAATGCATTTCTTTTTGTAAAGAAGTGCATTTTTATTTGACTATGTCGAATTTTGTAACA
CTTAATAAAATTCTGTATAT

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MANTHIFTKGEEIANAITHGIAALLSVAGLVVLIVSSVFNGTALHVVTFTIFGATMVILYTSSTFVHALPKGKAKDIFEI
LDHSSIYLFIAGTYTPFTLLVIQGAMGWSIFGVVWGIALFGIVFKIYFVKRFLFTSTLLYISMGWLIVIGWTQITNNLES
SGVYLLVAGGLCYTLGTIFYMWRGFKFHHMIWHLFVIAGTIFHYFCVLFFLLP

Sequences:

>Translated_213_residues
MANTHIFTKGEEIANAITHGIAALLSVAGLVVLIVSSVFNGTALHVVTFTIFGATMVILYTSSTFVHALPKGKAKDIFEI
LDHSSIYLFIAGTYTPFTLLVIQGAMGWSIFGVVWGIALFGIVFKIYFVKRFLFTSTLLYISMGWLIVIGWTQITNNLES
SGVYLLVAGGLCYTLGTIFYMWRGFKFHHMIWHLFVIAGTIFHYFCVLFFLLP
>Mature_212_residues
ANTHIFTKGEEIANAITHGIAALLSVAGLVVLIVSSVFNGTALHVVTFTIFGATMVILYTSSTFVHALPKGKAKDIFEIL
DHSSIYLFIAGTYTPFTLLVIQGAMGWSIFGVVWGIALFGIVFKIYFVKRFLFTSTLLYISMGWLIVIGWTQITNNLESS
GVYLLVAGGLCYTLGTIFYMWRGFKFHHMIWHLFVIAGTIFHYFCVLFFLLP

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=213, Percent_Identity=29.1079812206573, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI52630445, Length=207, Percent_Identity=26.5700483091787, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1789266, Length=206, Percent_Identity=36.8932038834951, Blast_Score=159, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI71996356, Length=215, Percent_Identity=31.1627906976744, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24640324, Length=230, Percent_Identity=30, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23746; Mature: 23614

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTHIFTKGEEIANAITHGIAALLSVAGLVVLIVSSVFNGTALHVVTFTIFGATMVILY
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE
TSSTFVHALPKGKAKDIFEILDHSSIYLFIAGTYTPFTLLVIQGAMGWSIFGVVWGIALF
ECCHHHEECCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHH
GIVFKIYFVKRFLFTSTLLYISMGWLIVIGWTQITNNLESSGVYLLVAGGLCYTLGTIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHHH
MWRGFKFHHMIWHLFVIAGTIFHYFCVLFFLLP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANTHIFTKGEEIANAITHGIAALLSVAGLVVLIVSSVFNGTALHVVTFTIFGATMVILY
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE
TSSTFVHALPKGKAKDIFEILDHSSIYLFIAGTYTPFTLLVIQGAMGWSIFGVVWGIALF
ECCHHHEECCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHH
GIVFKIYFVKRFLFTSTLLYISMGWLIVIGWTQITNNLESSGVYLLVAGGLCYTLGTIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHHH
MWRGFKFHHMIWHLFVIAGTIFHYFCVLFFLLP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]