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The map label for this gene is yrrM [H]

Identifier: 23099459

GI number: 23099459

Start: 2027776

End: 2028423

Strand: Reverse

Name: yrrM [H]

Synonym: OB2004

Alternate gene names: 23099459

Gene position: 2028423-2027776 (Counterclockwise)

Preceding gene: 23099460

Following gene: 23099458

Centisome position: 55.87

GC content: 36.42

Gene sequence:

>648_bases
ATGGATGATACGATATTAGATTATTTGGCAGGTTTAACTCCTAATTCTCCTGAATGGGCAGACCAACTTGAAATTGTTGC
AGAAGAAAACAATATACCTATTATGGATAGAACGAGTATGCATTTTGTACAAGTATTGTTACAAATCCACCAACCCAAAC
GGATTCTAGAGGTTGGGACAGCGATAGGTTATTCGGCATTAAGAATGCAAGATAATACCCAAGCTTCCATCGTCACGATT
GAAAAAGATGAAAAACGTTACCGTGATGCCGTTGAAAATATTAACAATTTGAACAAAGATGATTGCATAAAGGTGATTCA
TGGAGACGCTTTGGAAGAAATGAGCAGATTGAAGGAAAATAATGAGAGGTTTGATACGATCTTTATTGATGCAGCAAAAG
GTCAATACGGCAAGTTTTTAGAACTGGCCGATTTAATGGTGGGTAATGGTGGATTAGTCATAACAGATAACGTATTATTT
AGAGGGTACGTAGCAGCACCAGAGGAGACACCTAAACGTTTTCGTAGTATGGTAAAAAAATTACGGGAATATAATGAAAA
ACTAATGAACCATCCACATTATCAAACATCGATCTTACCAATTGGTGATGGTGTAGCAATTAGTTATAAGCTAGAAGAAG
GAAATTAG

Upstream 100 bases:

>100_bases
TTGAACAGCATGTGGAAAATAGAGAAGAATATATTAATTAAACGGAGTTGTGGAGAGAATATCTTCACATTCCGTTTTCA
TTTAGATGAGAGGGAAGACA

Downstream 100 bases:

>100_bases
GAGGAGCAAGGCATGACAAAGCAAAAACCAGTTGTAATTGGAGTAGCAGGAGGAAGTGGATCAGGAAAAACATCTGTGAC
TCGCTCCATTTGTCAACGAT

Product: caffeoyl-CoA O-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDDTILDYLAGLTPNSPEWADQLEIVAEENNIPIMDRTSMHFVQVLLQIHQPKRILEVGTAIGYSALRMQDNTQASIVTI
EKDEKRYRDAVENINNLNKDDCIKVIHGDALEEMSRLKENNERFDTIFIDAAKGQYGKFLELADLMVGNGGLVITDNVLF
RGYVAAPEETPKRFRSMVKKLREYNEKLMNHPHYQTSILPIGDGVAISYKLEEGN

Sequences:

>Translated_215_residues
MDDTILDYLAGLTPNSPEWADQLEIVAEENNIPIMDRTSMHFVQVLLQIHQPKRILEVGTAIGYSALRMQDNTQASIVTI
EKDEKRYRDAVENINNLNKDDCIKVIHGDALEEMSRLKENNERFDTIFIDAAKGQYGKFLELADLMVGNGGLVITDNVLF
RGYVAAPEETPKRFRSMVKKLREYNEKLMNHPHYQTSILPIGDGVAISYKLEEGN
>Mature_215_residues
MDDTILDYLAGLTPNSPEWADQLEIVAEENNIPIMDRTSMHFVQVLLQIHQPKRILEVGTAIGYSALRMQDNTQASIVTI
EKDEKRYRDAVENINNLNKDDCIKVIHGDALEEMSRLKENNERFDTIFIDAAKGQYGKFLELADLMVGNGGLVITDNVLF
RGYVAAPEETPKRFRSMVKKLREYNEKLMNHPHYQTSILPIGDGVAISYKLEEGN

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI72001028, Length=179, Percent_Identity=31.8435754189944, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17565612, Length=177, Percent_Identity=27.683615819209, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI72001127, Length=177, Percent_Identity=26.5536723163842, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 24457; Mature: 24457

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTILDYLAGLTPNSPEWADQLEIVAEENNIPIMDRTSMHFVQVLLQIHQPKRILEVGT
CCHHHHHHHHCCCCCCCCHHHHEEEEECCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHH
AIGYSALRMQDNTQASIVTIEKDEKRYRDAVENINNLNKDDCIKVIHGDALEEMSRLKEN
HHCHHHEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHC
NERFDTIFIDAAKGQYGKFLELADLMVGNGGLVITDNVLFRGYVAAPEETPKRFRSMVKK
CCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCEEEEEEEECCCCCHHHHHHHHHH
LREYNEKLMNHPHYQTSILPIGDGVAISYKLEEGN
HHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCC
>Mature Secondary Structure
MDDTILDYLAGLTPNSPEWADQLEIVAEENNIPIMDRTSMHFVQVLLQIHQPKRILEVGT
CCHHHHHHHHCCCCCCCCHHHHEEEEECCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHH
AIGYSALRMQDNTQASIVTIEKDEKRYRDAVENINNLNKDDCIKVIHGDALEEMSRLKEN
HHCHHHEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHC
NERFDTIFIDAAKGQYGKFLELADLMVGNGGLVITDNVLFRGYVAAPEETPKRFRSMVKK
CCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCEEEEEEEECCCCCHHHHHHHHHH
LREYNEKLMNHPHYQTSILPIGDGVAISYKLEEGN
HHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]