| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is bfmBAA [H]
Identifier: 23099321
GI number: 23099321
Start: 1897081
End: 1898067
Strand: Reverse
Name: bfmBAA [H]
Synonym: OB1866
Alternate gene names: 23099321
Gene position: 1898067-1897081 (Counterclockwise)
Preceding gene: 23099322
Following gene: 23099320
Centisome position: 52.28
GC content: 38.91
Gene sequence:
>987_bases ATGACTGAGTCTCAACTAGGAATAAGTAATGATATTGCCTTAGGAATGTATGAAATGATGTTATTGGCAAGAAAATTAGA TGAGAGAATGTGGCTATTAAATCGTGCCGGGAAAATTCCTTTTGTTATTTCCTGTCAAGGTCAAGAAGCTGCACAAGTCG GAGCTGCCTTTGCATTAAATCGTACTACGGATTATATTGCTCCTTATTATCGTGATTTAGGAGTTGTATTAGCTTTTGGT ATGAGTGCACAAGATGTTATGTTATCTGCTTTTGCAAAAGCAGAAGATCCGAATTCTGGTGGAAGACAAATGCCTGGACA CTTTGGACAAAAGAAAAATAGAATTTTAACTGGTTCTTCACCTGTAACAACCCAATTACCACATGCGGTTGGTGTTGCAT TAGCGGCAAAAATGGACAAAGAACCTCTGGTATCTTTTGTGACCTTAGGAGAAGGATCATCAAATCAGGGTGATTTTCAT GAAGGACTTAACTTTGCAGGGGTTCATAAACTTCCTGTAATTACAATGGTTGAAAATAACAAGTATGCTATTTCCGTACC TTATGACCGCCAAGTGGCAAGTGAAACTATTTCTGAAAGAGCGAACTCCTATGGAATGCCTGGAGTAACAGTGGACGGAA ATGATCCGGTGGCTGTGTATCAAGCTGTTTCAGAAGCAAGAGACAGGGCTGTAAGAGGAGAAGGGCCAACATTAATTGAA GCAATTACGTATCGCCTGACAGCACATTCAAGTGATGATGATGATCGGGCATACCGTGAAAAAAATGAAGTTGAAGAAGC GAAGAAGAAAGATTCAATTATTACATTTGCGACAACTTTAAAAGAAGCTGGAGTACTTAAAGATGAAAAAGAACAAGAAA TTATGTCTCGTATTGATGAACTTGTAAATGAAGCAACGGATTATGCGGAAAATGCTTCCTATGCAGAACCAGAAGATGCT TTGCGATATGTGTATGAGGAAGAATAG
Upstream 100 bases:
>100_bases AAGTATTCATCCACATCCAACATTATCAGAAGTGATCGGTGAAGCTGCATTAGCAGTAGAAGGAAATCAAATTCATGGTT AATTTAAGGAGGGACAATCA
Downstream 100 bases:
>100_bases AGAGGAGGAAGAGTTATGCCAGTAATGTCTTATATTCAAGCAATTACTACTGCAATGAAAGAAGAAATGCGTAGAGACAA AGATGTATTTGTTTTAGGAG
Product: branched-chain alpha-keto acid dehydrogenase E1 alpha chain
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; BCKDH E1-alpha [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTESQLGISNDIALGMYEMMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALNRTTDYIAPYYRDLGVVLAFG MSAQDVMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQLPHAVGVALAAKMDKEPLVSFVTLGEGSSNQGDFH EGLNFAGVHKLPVITMVENNKYAISVPYDRQVASETISERANSYGMPGVTVDGNDPVAVYQAVSEARDRAVRGEGPTLIE AITYRLTAHSSDDDDRAYREKNEVEEAKKKDSIITFATTLKEAGVLKDEKEQEIMSRIDELVNEATDYAENASYAEPEDA LRYVYEEE
Sequences:
>Translated_328_residues MTESQLGISNDIALGMYEMMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALNRTTDYIAPYYRDLGVVLAFG MSAQDVMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQLPHAVGVALAAKMDKEPLVSFVTLGEGSSNQGDFH EGLNFAGVHKLPVITMVENNKYAISVPYDRQVASETISERANSYGMPGVTVDGNDPVAVYQAVSEARDRAVRGEGPTLIE AITYRLTAHSSDDDDRAYREKNEVEEAKKKDSIITFATTLKEAGVLKDEKEQEIMSRIDELVNEATDYAENASYAEPEDA LRYVYEEE >Mature_327_residues TESQLGISNDIALGMYEMMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALNRTTDYIAPYYRDLGVVLAFGM SAQDVMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQLPHAVGVALAAKMDKEPLVSFVTLGEGSSNQGDFHE GLNFAGVHKLPVITMVENNKYAISVPYDRQVASETISERANSYGMPGVTVDGNDPVAVYQAVSEARDRAVRGEGPTLIEA ITYRLTAHSSDDDDRAYREKNEVEEAKKKDSIITFATTLKEAGVLKDEKEQEIMSRIDELVNEATDYAENASYAEPEDAL RYVYEEE
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BCKDHA family [H]
Homologues:
Organism=Homo sapiens, GI11386135, Length=315, Percent_Identity=37.7777777777778, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI258645172, Length=315, Percent_Identity=37.7777777777778, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4885543, Length=318, Percent_Identity=28.9308176100629, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI4505685, Length=316, Percent_Identity=29.4303797468354, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI291084742, Length=316, Percent_Identity=29.4303797468354, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI291084744, Length=323, Percent_Identity=28.7925696594427, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI291084757, Length=316, Percent_Identity=26.2658227848101, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI86563357, Length=317, Percent_Identity=39.4321766561514, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI86563355, Length=317, Percent_Identity=39.4321766561514, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17536047, Length=317, Percent_Identity=28.7066246056782, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI32564172, Length=317, Percent_Identity=28.7066246056782, Blast_Score=118, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6321026, Length=326, Percent_Identity=30.6748466257669, Blast_Score=129, Evalue=9e-31, Organism=Drosophila melanogaster, GI21355903, Length=265, Percent_Identity=34.7169811320755, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI24639744, Length=315, Percent_Identity=29.8412698412698, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI28571106, Length=315, Percent_Identity=29.8412698412698, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI24639740, Length=315, Percent_Identity=29.8412698412698, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI24639748, Length=306, Percent_Identity=30.718954248366, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24639746, Length=271, Percent_Identity=30.9963099630996, Blast_Score=117, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: =1.2.4.4 [H]
Molecular weight: Translated: 36009; Mature: 35878
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESQLGISNDIALGMYEMMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHEEC RTTDYIAPYYRDLGVVLAFGMSAQDVMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC PVTTQLPHAVGVALAAKMDKEPLVSFVTLGEGSSNQGDFHEGLNFAGVHKLPVITMVENN CCCHHCCHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECC KYAISVPYDRQVASETISERANSYGMPGVTVDGNDPVAVYQAVSEARDRAVRGEGPTLIE EEEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHH AITYRLTAHSSDDDDRAYREKNEVEEAKKKDSIITFATTLKEAGVLKDEKEQEIMSRIDE HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHCCCCCCHHHHHHHHHHHH LVNEATDYAENASYAEPEDALRYVYEEE HHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TESQLGISNDIALGMYEMMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHEEC RTTDYIAPYYRDLGVVLAFGMSAQDVMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC PVTTQLPHAVGVALAAKMDKEPLVSFVTLGEGSSNQGDFHEGLNFAGVHKLPVITMVENN CCCHHCCHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECC KYAISVPYDRQVASETISERANSYGMPGVTVDGNDPVAVYQAVSEARDRAVRGEGPTLIE EEEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHH AITYRLTAHSSDDDDRAYREKNEVEEAKKKDSIITFATTLKEAGVLKDEKEQEIMSRIDE HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHCCCCCCHHHHHHHHHHHH LVNEATDYAENASYAEPEDALRYVYEEE HHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377 [H]