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The map label for this gene is drm

Identifier: 23099301

GI number: 23099301

Start: 1878104

End: 1879282

Strand: Reverse

Name: drm

Synonym: OB1846

Alternate gene names: 23099301

Gene position: 1879282-1878104 (Counterclockwise)

Preceding gene: 23099302

Following gene: 23099300

Centisome position: 51.76

GC content: 36.56

Gene sequence:

>1179_bases
ATGAATAATTTTAAACGGGTGTTTTTAATAGTAATGGATTCAGTAGGAATTGGAGAAGCCCCCGATGCGAGAGATTTTAA
TGATGTAGGAGCAAATACATTAGGGCATATTGCAGAGAATATGAATGGGTTAAATATGCCTACAATGGCAAGTCTTGGAT
TAAGCAATATTCGAAAGATTGAAGGTATCGAGGCATCAGCTCAACCGAGAGCGCATTATACTAAAATGCAAGAAGCATCT
AATGGTAAAGATACAATGACAGGACATTGGGAAATTATGGGGTTGCATATAGAAAAACCGTTTCGTACATTTCCAGATGG
GTTTCCAGATGAATTGATCGAAGAATTAGAACAAAAAACCGGACGTAAGGTGATTGGAAATAAACCTGCCTCTGGTACAG
AGATACTTGATGAGCTTGGACAGCAACATATGGATACTGGCTCACTAATCGTTTATACATCAGCTGATTCAGTATTACAA
ATTGCTGCTCATGAAGAGATCATTCCAATAGATGAGCAATATAGAATTTGTGAAATTGCTAGAGAACTAACTTTAGATGA
AAAATACATGGTTGGAAGAGTAATCGCACGTCCATTTATTGGTGAACCAGGTGCATTTGAACGTACATCTAATCGACATG
ACTATGCATTGAAGCCATTCGGCAGAACAGTTATGAATGAATTAAAAGATAATAATTATGACGTCCTAGCATTAGGGAAA
ATATCGGATATTTATGATGGAGAAGGAGTCACAGAATCAATCCGAACAAAGGATAACAACGATGGTATGGTACAATTACG
AAAGTCAATGGATAAATCGTTTACTGGATTGAACTTCTTAAACCTCGTTGATTTTGATGCGAAATATGGTCACCGAAGAG
ATCCAGTGGGATATGGAAAAGCTTTAGAAGAGTTTGATGAACAATTACCAGAGATTATAGAGCAACTACACGATGATGAT
CTACTGATAATTACTGCTGATCATGGAAATGACCCTATTCATCATGGTACTGACCATACAAGAGAATACGTACCATTAGT
CGTTTATCATAATCAAATTAAACAAGCAAAAGAATTACCGATTAGAAAAACATTTGCGGATATAGGAGCAACTATTGCAG
ATAACTTTGGAATTAAGCTGCCTGAACACGGAGAAAGCTTTTTGAACGATATTAAGTAG

Upstream 100 bases:

>100_bases
TAATTTTTTTCAACTATGTCGTCTGACATCTAACATCAGTGAGAAGAAACATAGTAAAAGCATGTTTTGGGAATATACAT
AACAGGAGGTATGACAAACA

Downstream 100 bases:

>100_bases
TAATGGGGGAAGATAGAATGGATAATCAATTTATTCAAGAAGCAGCAAGTTTTATAAAAGAAAAAATGAACAGAGAACCA
TCAATAGGTTTAATCTTAGG

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MNNFKRVFLIVMDSVGIGEAPDARDFNDVGANTLGHIAENMNGLNMPTMASLGLSNIRKIEGIEASAQPRAHYTKMQEAS
NGKDTMTGHWEIMGLHIEKPFRTFPDGFPDELIEELEQKTGRKVIGNKPASGTEILDELGQQHMDTGSLIVYTSADSVLQ
IAAHEEIIPIDEQYRICEIARELTLDEKYMVGRVIARPFIGEPGAFERTSNRHDYALKPFGRTVMNELKDNNYDVLALGK
ISDIYDGEGVTESIRTKDNNDGMVQLRKSMDKSFTGLNFLNLVDFDAKYGHRRDPVGYGKALEEFDEQLPEIIEQLHDDD
LLIITADHGNDPIHHGTDHTREYVPLVVYHNQIKQAKELPIRKTFADIGATIADNFGIKLPEHGESFLNDIK

Sequences:

>Translated_392_residues
MNNFKRVFLIVMDSVGIGEAPDARDFNDVGANTLGHIAENMNGLNMPTMASLGLSNIRKIEGIEASAQPRAHYTKMQEAS
NGKDTMTGHWEIMGLHIEKPFRTFPDGFPDELIEELEQKTGRKVIGNKPASGTEILDELGQQHMDTGSLIVYTSADSVLQ
IAAHEEIIPIDEQYRICEIARELTLDEKYMVGRVIARPFIGEPGAFERTSNRHDYALKPFGRTVMNELKDNNYDVLALGK
ISDIYDGEGVTESIRTKDNNDGMVQLRKSMDKSFTGLNFLNLVDFDAKYGHRRDPVGYGKALEEFDEQLPEIIEQLHDDD
LLIITADHGNDPIHHGTDHTREYVPLVVYHNQIKQAKELPIRKTFADIGATIADNFGIKLPEHGESFLNDIK
>Mature_392_residues
MNNFKRVFLIVMDSVGIGEAPDARDFNDVGANTLGHIAENMNGLNMPTMASLGLSNIRKIEGIEASAQPRAHYTKMQEAS
NGKDTMTGHWEIMGLHIEKPFRTFPDGFPDELIEELEQKTGRKVIGNKPASGTEILDELGQQHMDTGSLIVYTSADSVLQ
IAAHEEIIPIDEQYRICEIARELTLDEKYMVGRVIARPFIGEPGAFERTSNRHDYALKPFGRTVMNELKDNNYDVLALGK
ISDIYDGEGVTESIRTKDNNDGMVQLRKSMDKSFTGLNFLNLVDFDAKYGHRRDPVGYGKALEEFDEQLPEIIEQLHDDD
LLIITADHGNDPIHHGTDHTREYVPLVVYHNQIKQAKELPIRKTFADIGATIADNFGIKLPEHGESFLNDIK

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=410, Percent_Identity=44.6341463414634, Blast_Score=325, Evalue=4e-90,
Organism=Escherichia coli, GI1789781, Length=435, Percent_Identity=27.5862068965517, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_OCEIH (Q8EQ67)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692767.1
- ProteinModelPortal:   Q8EQ67
- SMR:   Q8EQ67
- GeneID:   1018338
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB1846
- NMPDR:   fig|221109.1.peg.1845
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- ProtClustDB:   PRK05362
- BioCyc:   OIHE221109:OB1846-MONOMER
- BRENDA:   5.4.2.7
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 43994; Mature: 43994

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFKRVFLIVMDSVGIGEAPDARDFNDVGANTLGHIAENMNGLNMPTMASLGLSNIRKI
CCCCEEEEEEEEECCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCCCHHHHHCHHHHHHH
EGIEASAQPRAHYTKMQEASNGKDTMTGHWEIMGLHIEKPFRTFPDGFPDELIEELEQKT
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHC
GRKVIGNKPASGTEILDELGQQHMDTGSLIVYTSADSVLQIAAHEEIIPIDEQYRICEIA
CCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHCCCCCCCCCHHHHHHHH
RELTLDEKYMVGRVIARPFIGEPGAFERTSNRHDYALKPFGRTVMNELKDNNYDVLALGK
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHCCCCCCEEEECC
ISDIYDGEGVTESIRTKDNNDGMVQLRKSMDKSFTGLNFLNLVDFDAKYGHRRDPVGYGK
CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHEECCCHHCCCCCCCCCHHH
ALEEFDEQLPEIIEQLHDDDLLIITADHGNDPIHHGTDHTREYVPLVVYHNQIKQAKELP
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHEEEEEEHHHHHHHHHCC
IRKTFADIGATIADNFGIKLPEHGESFLNDIK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNNFKRVFLIVMDSVGIGEAPDARDFNDVGANTLGHIAENMNGLNMPTMASLGLSNIRKI
CCCCEEEEEEEEECCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCCCHHHHHCHHHHHHH
EGIEASAQPRAHYTKMQEASNGKDTMTGHWEIMGLHIEKPFRTFPDGFPDELIEELEQKT
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHC
GRKVIGNKPASGTEILDELGQQHMDTGSLIVYTSADSVLQIAAHEEIIPIDEQYRICEIA
CCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHCCCCCCCCCHHHHHHHH
RELTLDEKYMVGRVIARPFIGEPGAFERTSNRHDYALKPFGRTVMNELKDNNYDVLALGK
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHCCCCCCEEEECC
ISDIYDGEGVTESIRTKDNNDGMVQLRKSMDKSFTGLNFLNLVDFDAKYGHRRDPVGYGK
CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHEECCCHHCCCCCCCCCHHH
ALEEFDEQLPEIIEQLHDDDLLIITADHGNDPIHHGTDHTREYVPLVVYHNQIKQAKELP
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHEEEEEEHHHHHHHHHCC
IRKTFADIGATIADNFGIKLPEHGESFLNDIK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376