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The map label for this gene is ypbD [H]

Identifier: 23099268

GI number: 23099268

Start: 1849166

End: 1849732

Strand: Reverse

Name: ypbD [H]

Synonym: OB1813

Alternate gene names: 23099268

Gene position: 1849732-1849166 (Counterclockwise)

Preceding gene: 23099269

Following gene: 23099267

Centisome position: 50.95

GC content: 27.16

Gene sequence:

>567_bases
ATGAGACAAGATGAAATCATAAAGCAATTATCCGATAAAGAATTAAGATTTCAATTAGTTTTTTCTCAAATTTTATTTTT
AGCTGGAAGTATTTTATTAAGTTTTATTTTGTTTCCTTCTTGGGAAGCATGGTTGAATTACTTTGATTTTAATTTTAATG
AAATAGTATTAATCGGCAGCGGAACGGCATTCGTTGTGATATTATTTGATTTTATACTGATGAAAGTTTTTCCAAAAGAA
TCATTGGATGATGGTGGAATTAATAAGAGAATTTTTGAAAATCAGCCTATATCGTTCATTGTTGGTTTTACGTTATTAGT
AGCAATAAGTGAAGAATTATTCTTTCGTGGAACAATTCAAACTACTTTCGGTTATGTATTTGCAAGTTTATTATTTGCTT
TCGTACATATCCGTTATTTAAAAAAACCAGTATTATTTTTATCCGTAGTTTTAGCAAGCTTTTTTATTGGTTGGATATTT
GAACGTACGGAAAATTTACTTATTACCATAACCGCTCATTTTATTATTGATTTAGTATTAGGTTTAATTATTCGTTTCAA
GAAATGA

Upstream 100 bases:

>100_bases
TGGAGTAATTGGCAGCCGGAAACAATCATTATTAAATCTCGTGAATCTTTATCGTGGGAAAGTAAATTACAATCTATTTT
TCATATAACCGGGGTAGAAC

Downstream 100 bases:

>100_bases
GGTGCTTAGTATGTCGAACATTACGGAAGAGGCAAAGAAAGATCAGGCTGATGACTTAAGAAAAGCAGTAGATGAACTAA
AAGATAGTTCAAATCAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRQDEIIKQLSDKELRFQLVFSQILFLAGSILLSFILFPSWEAWLNYFDFNFNEIVLIGSGTAFVVILFDFILMKVFPKE
SLDDGGINKRIFENQPISFIVGFTLLVAISEELFFRGTIQTTFGYVFASLLFAFVHIRYLKKPVLFLSVVLASFFIGWIF
ERTENLLITITAHFIIDLVLGLIIRFKK

Sequences:

>Translated_188_residues
MRQDEIIKQLSDKELRFQLVFSQILFLAGSILLSFILFPSWEAWLNYFDFNFNEIVLIGSGTAFVVILFDFILMKVFPKE
SLDDGGINKRIFENQPISFIVGFTLLVAISEELFFRGTIQTTFGYVFASLLFAFVHIRYLKKPVLFLSVVLASFFIGWIF
ERTENLLITITAHFIIDLVLGLIIRFKK
>Mature_188_residues
MRQDEIIKQLSDKELRFQLVFSQILFLAGSILLSFILFPSWEAWLNYFDFNFNEIVLIGSGTAFVVILFDFILMKVFPKE
SLDDGGINKRIFENQPISFIVGFTLLVAISEELFFRGTIQTTFGYVFASLLFAFVHIRYLKKPVLFLSVVLASFFIGWIF
ERTENLLITITAHFIIDLVLGLIIRFKK

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003675 [H]

Pfam domain/function: PF02517 Abi [H]

EC number: NA

Molecular weight: Translated: 21815; Mature: 21815

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQDEIIKQLSDKELRFQLVFSQILFLAGSILLSFILFPSWEAWLNYFDFNFNEIVLIGS
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEC
GTAFVVILFDFILMKVFPKESLDDGGINKRIFENQPISFIVGFTLLVAISEELFFRGTIQ
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TTFGYVFASLLFAFVHIRYLKKPVLFLSVVLASFFIGWIFERTENLLITITAHFIIDLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
GLIIRFKK
HHHHHCCC
>Mature Secondary Structure
MRQDEIIKQLSDKELRFQLVFSQILFLAGSILLSFILFPSWEAWLNYFDFNFNEIVLIGS
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEC
GTAFVVILFDFILMKVFPKESLDDGGINKRIFENQPISFIVGFTLLVAISEELFFRGTIQ
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TTFGYVFASLLFAFVHIRYLKKPVLFLSVVLASFFIGWIFERTENLLITITAHFIIDLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
GLIIRFKK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]