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The map label for this gene is dnaD [H]

Identifier: 23099213

GI number: 23099213

Start: 1797039

End: 1797716

Strand: Reverse

Name: dnaD [H]

Synonym: OB1758

Alternate gene names: 23099213

Gene position: 1797716-1797039 (Counterclockwise)

Preceding gene: 23099214

Following gene: 23099212

Centisome position: 49.52

GC content: 33.78

Gene sequence:

>678_bases
ATGAAAAAGAGAAATTTACATTTACATGAGATTGTAAAAGATCAACTTAGTATTCCTGCGAAACTTCTTACCGACTATCA
TCTGTTAGGTTTACATGAAGCAGAAGTAATGTTGATTTTACAATTACTACGATTCTCAGAAAAAAATAATGATTTTCCAA
CCCCATCAGAATTGGCACATTTCGTTAGTTTTGATGAAAAACAGTGTGCCCAAATTTTACGTAAATTACTTCAACAAGGC
TTATTAACTATAGAAAAAAATGAAGAAATTGAACCTTATAGTGAAGCTTATTCTCTAGAACCCTTATGGGAAAAGTTATA
CAGTCAGAAGCAAGAAAAGAATGAAAATGAAGATCCAATTGGTACGATCTTTATTCTATTTGAACAAGAATTCGGTAGAC
CACTATCTCCTTTCGAAATAGAAACCATTAATACTTGGATAGATGAGGATGAAATAGAACCAGCTCTAATAAAAGCTGGA
TTAAGAGAATCCGTACTAATGGGTAAGCTAAACTTTAAATATATCGACAGGATCTTAAGAGAGTGGAAGAGGAAAGGGAT
TCATTCTGTTCAGGATGCACGAAAAGCAAGTCAACCATTCCATCAAAATCAACAATCGCCAAAAACGAGTCAAAAGAGAG
ACACCTCGTTCTACTATAATTGGCTAGAGGGGGAATAA

Upstream 100 bases:

>100_bases
ATATCCATAATATGAAGGAATCAATCCCTTGCATTTTACGCGAGGGATTTTTCTTTCTATACTACATGTACATGCTATAC
TGTTATTGAGGTGCTTATCA

Downstream 100 bases:

>100_bases
AATGTGCTTAACCAAAAACAAATACGACAATGTCTAGATATTATGGCGGAGATGTACCCTGATGCTAAAGGCGAATTGGA
ACACTCTAATGCTTTTGAAC

Product: chromosome replication initiator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKKRNLHLHEIVKDQLSIPAKLLTDYHLLGLHEAEVMLILQLLRFSEKNNDFPTPSELAHFVSFDEKQCAQILRKLLQQG
LLTIEKNEEIEPYSEAYSLEPLWEKLYSQKQEKNENEDPIGTIFILFEQEFGRPLSPFEIETINTWIDEDEIEPALIKAG
LRESVLMGKLNFKYIDRILREWKRKGIHSVQDARKASQPFHQNQQSPKTSQKRDTSFYYNWLEGE

Sequences:

>Translated_225_residues
MKKRNLHLHEIVKDQLSIPAKLLTDYHLLGLHEAEVMLILQLLRFSEKNNDFPTPSELAHFVSFDEKQCAQILRKLLQQG
LLTIEKNEEIEPYSEAYSLEPLWEKLYSQKQEKNENEDPIGTIFILFEQEFGRPLSPFEIETINTWIDEDEIEPALIKAG
LRESVLMGKLNFKYIDRILREWKRKGIHSVQDARKASQPFHQNQQSPKTSQKRDTSFYYNWLEGE
>Mature_225_residues
MKKRNLHLHEIVKDQLSIPAKLLTDYHLLGLHEAEVMLILQLLRFSEKNNDFPTPSELAHFVSFDEKQCAQILRKLLQQG
LLTIEKNEEIEPYSEAYSLEPLWEKLYSQKQEKNENEDPIGTIFILFEQEFGRPLSPFEIETINTWIDEDEIEPALIKAG
LRESVLMGKLNFKYIDRILREWKRKGIHSVQDARKASQPFHQNQQSPKTSQKRDTSFYYNWLEGE

Specific function: Probable component of primosome involved in the initiation of DNA replication [H]

COG id: COG3935

COG function: function code L; Putative primosome component and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006343 [H]

Pfam domain/function: PF07261 DnaB_2 [H]

EC number: NA

Molecular weight: Translated: 26572; Mature: 26572

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRNLHLHEIVKDQLSIPAKLLTDYHLLGLHEAEVMLILQLLRFSEKNNDFPTPSELAH
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FVSFDEKQCAQILRKLLQQGLLTIEKNEEIEPYSEAYSLEPLWEKLYSQKQEKNENEDPI
HHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCC
GTIFILFEQEFGRPLSPFEIETINTWIDEDEIEPALIKAGLRESVLMGKLNFKYIDRILR
EEEEEEEEHHHCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
EWKRKGIHSVQDARKASQPFHQNQQSPKTSQKRDTSFYYNWLEGE
HHHHCCHHHHHHHHHHCCCHHCCCCCCCCHHHCCCHHEEEECCCC
>Mature Secondary Structure
MKKRNLHLHEIVKDQLSIPAKLLTDYHLLGLHEAEVMLILQLLRFSEKNNDFPTPSELAH
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FVSFDEKQCAQILRKLLQQGLLTIEKNEEIEPYSEAYSLEPLWEKLYSQKQEKNENEDPI
HHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCC
GTIFILFEQEFGRPLSPFEIETINTWIDEDEIEPALIKAGLRESVLMGKLNFKYIDRILR
EEEEEEEEHHHCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
EWKRKGIHSVQDARKASQPFHQNQQSPKTSQKRDTSFYYNWLEGE
HHHHCCHHHHHHHHHHCCCHHCCCCCCCCHHHCCCHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704260; 8760912; 9384377 [H]