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The map label for this gene is cbaB [H]

Identifier: 23099200

GI number: 23099200

Start: 1783894

End: 1784397

Strand: Direct

Name: cbaB [H]

Synonym: OB1745

Alternate gene names: 23099200

Gene position: 1783894-1784397 (Clockwise)

Preceding gene: 23099198

Following gene: 23099201

Centisome position: 49.14

GC content: 33.33

Gene sequence:

>504_bases
GTGCATCTGCATAAATTAGAAAAATGGTGGTTAATTCTTGGAGTTAGTGCATTAATAATTTTTTTAATTGTTTTAGGGTT
TGGGGCTTTTTATATGGGTACACATCCGCAAAGTCATGGATTAACAATTGATCCAAATAATGTCGAAGCAAATGAAGCTT
TTCAACAAGAAAATCTTGGATTAACGAAAGTGGATGAAGATCATTATATTGTTAATGTTGTTGCTAGTGCTTTTAATTAT
GATCTTGGTGTAGATGAAGACGGAAATTCTGTAAGTCATATTAAGATTCCTAAAGGTGCTTCTGTATTATTTCAAGTAGT
CACAACAGACGTCATACATGGATTTAATATTGCTGGAACGAATGTAAATATGATGGTAGAACCAGGCTACGTTAGCAGTA
TGGAAGTTCAAATGAATAATGTTGGAGAATTTACCTTGTTATGTAATGAGTATTGCGGAGTTGGACATCATATGATGTTT
ACGACAGTGGAGGTGTATGAATAA

Upstream 100 bases:

>100_bases
AACATTTGCTTCAGTTCTACTATTAGGTGGGCTGATCATTATATGCTGGGTATCTGTATTTGCAATTTTTATATCTAGAT
AGGAAGAAAGGATGAGTGAC

Downstream 100 bases:

>100_bases
TGGCACTTGCTAATTTACAAACATTCGAAGATATTTCAACTGAATCTATCGTGATTACAAAAACAGATTCTAAATTATAC
TTATCATTTATTTATGTAGC

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome c ba(3) subunit II; Cytochrome c oxidase polypeptide II; Cytochrome cba3 subunit 2 [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MHLHKLEKWWLILGVSALIIFLIVLGFGAFYMGTHPQSHGLTIDPNNVEANEAFQQENLGLTKVDEDHYIVNVVASAFNY
DLGVDEDGNSVSHIKIPKGASVLFQVVTTDVIHGFNIAGTNVNMMVEPGYVSSMEVQMNNVGEFTLLCNEYCGVGHHMMF
TTVEVYE

Sequences:

>Translated_167_residues
MHLHKLEKWWLILGVSALIIFLIVLGFGAFYMGTHPQSHGLTIDPNNVEANEAFQQENLGLTKVDEDHYIVNVVASAFNY
DLGVDEDGNSVSHIKIPKGASVLFQVVTTDVIHGFNIAGTNVNMMVEPGYVSSMEVQMNNVGEFTLLCNEYCGVGHHMMF
TTVEVYE
>Mature_167_residues
MHLHKLEKWWLILGVSALIIFLIVLGFGAFYMGTHPQSHGLTIDPNNVEANEAFQQENLGLTKVDEDHYIVNVVASAFNY
DLGVDEDGNSVSHIKIPKGASVLFQVVTTDVIHGFNIAGTNVNMMVEPGYVSSMEVQMNNVGEFTLLCNEYCGVGHHMMF
TTVEVYE

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR015209 [H]

Pfam domain/function: PF00116 COX2; PF09125 COX2-transmemb [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 18521; Mature: 18521

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLHKLEKWWLILGVSALIIFLIVLGFGAFYMGTHPQSHGLTIDPNNVEANEAFQQENLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHCCC
LTKVDEDHYIVNVVASAFNYDLGVDEDGNSVSHIKIPKGASVLFQVVTTDVIHGFNIAGT
CEEECCCCCCEEEEHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCC
NVNMMVEPGYVSSMEVQMNNVGEFTLLCNEYCGVGHHMMFTTVEVYE
CEEEEECCCCCCEEEEEECCCCEEEEEEHHHCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MHLHKLEKWWLILGVSALIIFLIVLGFGAFYMGTHPQSHGLTIDPNNVEANEAFQQENLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHCCC
LTKVDEDHYIVNVVASAFNYDLGVDEDGNSVSHIKIPKGASVLFQVVTTDVIHGFNIAGT
CEEECCCCCCEEEEHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCC
NVNMMVEPGYVSSMEVQMNNVGEFTLLCNEYCGVGHHMMFTTVEVYE
CEEEEECCCCCCEEEEEECCCCEEEEEEHHHCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7657607; 10775261 [H]