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The map label for this gene is yhfW [H]

Identifier: 23099184

GI number: 23099184

Start: 1772368

End: 1773897

Strand: Reverse

Name: yhfW [H]

Synonym: OB1729

Alternate gene names: 23099184

Gene position: 1773897-1772368 (Counterclockwise)

Preceding gene: 23099185

Following gene: 23099177

Centisome position: 48.86

GC content: 34.58

Gene sequence:

>1530_bases
ATGAAAGAACAATCATTGTCATCCGCAGAACCGTTATGGAGAAAAAATATTGAGCTTCCTCAATTTGATAAATTGCAGCA
ATCTGTGAAAACAGATGTTTGTATAGTTGGTGGTGGAATAACCGGAATCACTACTGCCTATTTACTAGCAAAAGAGGGAG
TTAAAGTAACACTGATTGACGCAGATAATATATTAAATGGAACAACTGGGCATACAACAGCAAAAATCACAGAACAACAC
GGATTAGTATATGATGAACTGATTAAAAACCTGGGGAAAGAAGTTGCATTAAACTATTATCAAGCTGCTAAAGAAGCGAA
TGATTTCATAAAAAATACGATACAACAACAAGATATATCTTGCGGTTATGAGGAACAAGACGCCTATTTGTATACGAATG
ATTATTATTATGTAGATAAAATTGAAAATGAATTCAACGCATATAACAAATTGAATATTAACGCTGAGCTAGTTGATACC
TTACCGATTCAAATTCCCATAAAAAAAGGGTTAGTAATGCCTGGGCAAGCTCAATTTCATCCATTAAAATACTTACATTT
CTTACTTCGTGATGCAATTAATAACGGACTAGAGGTTTATGAACATACGGTTGCTATGGAAGTAGAAAGAAATAAGCACA
CAACAGTTATTACAAAAGATGACCATCGTATTACTTGCAATTACGTTGTTTCTGCAAGCCACTTTCCATTTCATGATAGT
GAAGGATTATATTTCACACGAATGTACGCAGAACGTTCCTATGTAATTGCTGGGAAAACTGATACCAAAGTAAAAGGAAT
GTATATTAATGTTGAATCTGCTACACGATCTGTACGATCGGTAACCATTGATAACGAGGATTATATATTAATTGCTGGTG
AAAATCATCGTGCTGGACAAGGAAAATCATCTATAGGGCATTACGAGGAGTTGCAAGCGTTTGCAAAAACATATTTTGAT
GTAAGCCATATAGCTTATCGATGGTCTGCACAGGACCTTACTACTCTAGATAAACTTCCTTATATTGGTCCGATTACAGA
CGGGGACCCAAGTATTCTTATAGCAACCGGTTATCGTAAATGGGGCATGACAAATGGAACATTAGCCGCACATGTATTAG
CAAGTTATATAATGAAACATGAAAATAATCGATACCGTGAATTATTATCACCAAGTAGATTTAAGGCTGATCCAATGGTA
AAGAAGTTATTTACCGTAAATGCAAATACAGCGAAGGAATTCATAAAAGGAAAGTTTAATTTTACTGGTGATACAAAAGT
TGACGAATTAAATCAAGATGAAGCAACGATTACGCACAATAAAGGATCTAGAATTGGTGTATATAAAGATAAACAAGATA
ATATTTATAGCGTTGATACAACTTGTACACATCTAGGATGTGAAGTAAATTGGAATCAAGAAGATCGAACTTGGGATTGT
CCGTGTCATGGGTCTAGATTTAATTACACAGGAGAAGTTATTGAAGGCCCAGCAAAACAACCATTGAAAAAAGTATCCTT
AGATGATTAA

Upstream 100 bases:

>100_bases
ACTAAAAAACCTTTTTTCCATGTGAAAAAGGGTTTTTTTTGAGTAAAGAACAATTAGAAGGGAATGATATTACATAAATT
CTTGAATAAGGAGACCAATA

Downstream 100 bases:

>100_bases
ACAATAATAAAGTCTGTAAAAATAAAATTATTAATTCTACTAGTTAATTTTTTAATCTTGTCTCACTATCCAGAGTTTAC
TTTGATTATGAGACAAGATT

Product: Rieske [2Fe-2S] iron-sulfur protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MKEQSLSSAEPLWRKNIELPQFDKLQQSVKTDVCIVGGGITGITTAYLLAKEGVKVTLIDADNILNGTTGHTTAKITEQH
GLVYDELIKNLGKEVALNYYQAAKEANDFIKNTIQQQDISCGYEEQDAYLYTNDYYYVDKIENEFNAYNKLNINAELVDT
LPIQIPIKKGLVMPGQAQFHPLKYLHFLLRDAINNGLEVYEHTVAMEVERNKHTTVITKDDHRITCNYVVSASHFPFHDS
EGLYFTRMYAERSYVIAGKTDTKVKGMYINVESATRSVRSVTIDNEDYILIAGENHRAGQGKSSIGHYEELQAFAKTYFD
VSHIAYRWSAQDLTTLDKLPYIGPITDGDPSILIATGYRKWGMTNGTLAAHVLASYIMKHENNRYRELLSPSRFKADPMV
KKLFTVNANTAKEFIKGKFNFTGDTKVDELNQDEATITHNKGSRIGVYKDKQDNIYSVDTTCTHLGCEVNWNQEDRTWDC
PCHGSRFNYTGEVIEGPAKQPLKKVSLDD

Sequences:

>Translated_509_residues
MKEQSLSSAEPLWRKNIELPQFDKLQQSVKTDVCIVGGGITGITTAYLLAKEGVKVTLIDADNILNGTTGHTTAKITEQH
GLVYDELIKNLGKEVALNYYQAAKEANDFIKNTIQQQDISCGYEEQDAYLYTNDYYYVDKIENEFNAYNKLNINAELVDT
LPIQIPIKKGLVMPGQAQFHPLKYLHFLLRDAINNGLEVYEHTVAMEVERNKHTTVITKDDHRITCNYVVSASHFPFHDS
EGLYFTRMYAERSYVIAGKTDTKVKGMYINVESATRSVRSVTIDNEDYILIAGENHRAGQGKSSIGHYEELQAFAKTYFD
VSHIAYRWSAQDLTTLDKLPYIGPITDGDPSILIATGYRKWGMTNGTLAAHVLASYIMKHENNRYRELLSPSRFKADPMV
KKLFTVNANTAKEFIKGKFNFTGDTKVDELNQDEATITHNKGSRIGVYKDKQDNIYSVDTTCTHLGCEVNWNQEDRTWDC
PCHGSRFNYTGEVIEGPAKQPLKKVSLDD
>Mature_509_residues
MKEQSLSSAEPLWRKNIELPQFDKLQQSVKTDVCIVGGGITGITTAYLLAKEGVKVTLIDADNILNGTTGHTTAKITEQH
GLVYDELIKNLGKEVALNYYQAAKEANDFIKNTIQQQDISCGYEEQDAYLYTNDYYYVDKIENEFNAYNKLNINAELVDT
LPIQIPIKKGLVMPGQAQFHPLKYLHFLLRDAINNGLEVYEHTVAMEVERNKHTTVITKDDHRITCNYVVSASHFPFHDS
EGLYFTRMYAERSYVIAGKTDTKVKGMYINVESATRSVRSVTIDNEDYILIAGENHRAGQGKSSIGHYEELQAFAKTYFD
VSHIAYRWSAQDLTTLDKLPYIGPITDGDPSILIATGYRKWGMTNGTLAAHVLASYIMKHENNRYRELLSPSRFKADPMV
KKLFTVNANTAKEFIKGKFNFTGDTKVDELNQDEATITHNKGSRIGVYKDKQDNIYSVDTTCTHLGCEVNWNQEDRTWDC
PCHGSRFNYTGEVIEGPAKQPLKKVSLDD

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=387, Percent_Identity=24.8062015503876, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 57619; Mature: 57619

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQSLSSAEPLWRKNIELPQFDKLQQSVKTDVCIVGGGITGITTAYLLAKEGVKVTLID
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEE
ADNILNGTTGHTTAKITEQHGLVYDELIKNLGKEVALNYYQAAKEANDFIKNTIQQQDIS
CCCCCCCCCCCEEEEEEHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
CGYEEQDAYLYTNDYYYVDKIENEFNAYNKLNINAELVDTLPIQIPIKKGLVMPGQAQFH
CCCCCCCCEEEECCEEEEEECCCHHCCCEEEECCEEEEEECEEEEECCCCEECCCCCCCC
PLKYLHFLLRDAINNGLEVYEHTVAMEVERNKHTTVITKDDHRITCNYVVSASHFPFHDS
HHHHHHHHHHHHHCCCHHHHEEEEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCCCCC
EGLYFTRMYAERSYVIAGKTDTKVKGMYINVESATRSVRSVTIDNEDYILIAGENHRAGQ
CCEEEEEEECCCEEEEECCCCCEEEEEEEEEHHHCCCEEEEEECCCCEEEEECCCCCCCC
GKSSIGHYEELQAFAKTYFDVSHIAYRWSAQDLTTLDKLPYIGPITDGDPSILIATGYRK
CCCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCCCCCCCCEEEEECCHH
WGMTNGTLAAHVLASYIMKHENNRYRELLSPSRFKADPMVKKLFTVNANTAKEFIKGKFN
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHEEECCHHHHHHHCCCCC
FTGDTKVDELNQDEATITHNKGSRIGVYKDKQDNIYSVDTTCTHLGCEVNWNQEDRTWDC
CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECEEEECCCCCCEECC
PCHGSRFNYTGEVIEGPAKQPLKKVSLDD
CCCCCCCCCCCHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKEQSLSSAEPLWRKNIELPQFDKLQQSVKTDVCIVGGGITGITTAYLLAKEGVKVTLID
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEE
ADNILNGTTGHTTAKITEQHGLVYDELIKNLGKEVALNYYQAAKEANDFIKNTIQQQDIS
CCCCCCCCCCCEEEEEEHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
CGYEEQDAYLYTNDYYYVDKIENEFNAYNKLNINAELVDTLPIQIPIKKGLVMPGQAQFH
CCCCCCCCEEEECCEEEEEECCCHHCCCEEEECCEEEEEECEEEEECCCCEECCCCCCCC
PLKYLHFLLRDAINNGLEVYEHTVAMEVERNKHTTVITKDDHRITCNYVVSASHFPFHDS
HHHHHHHHHHHHHCCCHHHHEEEEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCCCCC
EGLYFTRMYAERSYVIAGKTDTKVKGMYINVESATRSVRSVTIDNEDYILIAGENHRAGQ
CCEEEEEEECCCEEEEECCCCCEEEEEEEEEHHHCCCEEEEEECCCCEEEEECCCCCCCC
GKSSIGHYEELQAFAKTYFDVSHIAYRWSAQDLTTLDKLPYIGPITDGDPSILIATGYRK
CCCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCCCCCCCCEEEEECCHH
WGMTNGTLAAHVLASYIMKHENNRYRELLSPSRFKADPMVKKLFTVNANTAKEFIKGKFN
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHEEECCHHHHHHHCCCCC
FTGDTKVDELNQDEATITHNKGSRIGVYKDKQDNIYSVDTTCTHLGCEVNWNQEDRTWDC
CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECEEEECCCCCCEECC
PCHGSRFNYTGEVIEGPAKQPLKKVSLDD
CCCCCCCCCCCHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]