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The map label for this gene is yidD [C]

Identifier: 23099142

GI number: 23099142

Start: 1726831

End: 1727103

Strand: Reverse

Name: yidD [C]

Synonym: OB1687

Alternate gene names: 23099142

Gene position: 1727103-1726831 (Counterclockwise)

Preceding gene: 23099143

Following gene: 23099141

Centisome position: 47.57

GC content: 32.23

Gene sequence:

>273_bases
ATGAAATTTATTTTTATCGGACTAATAAAATTTTATCGAAGCGCTATTAGCCCCTTCACTCCTTCTAGTTGTCGTTTTTA
TCCAACTTGTTCTGAGTATGGATTAGAAGCAATTAAACGTTTTGGTGCGTTCAAAGGTGGTATATTAACTATAAAAAGAA
TTAGCAAATGCCATCCTTTTCACCCTGGTGGCGTAGATGTTGTTCCAGATAAAGTAAAAAATATCAACAATGAAAAACAT
CTAGAAAAAGGAGTTATTCGAAATGAAGATTAA

Upstream 100 bases:

>100_bases
AAATTTCACGTTTCTTGTCGTAACGAAGAATCCATTCATATGCATGACGCAATTGCATCAATAACATACGATAAAAGCTC
CGAATAAAGGAGATTATTTC

Downstream 100 bases:

>100_bases
TGTAACGGAAGAAGCAGCAAGTTGGTACAAAGAAGAATTAAATTTAACAAAAGAGTCCTCCTTGCGATTTTTTGTTAGGT
ACGGGGGTGTCGGCGGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKFIFIGLIKFYRSAISPFTPSSCRFYPTCSEYGLEAIKRFGAFKGGILTIKRISKCHPFHPGGVDVVPDKVKNINNEKH
LEKGVIRNED

Sequences:

>Translated_90_residues
MKFIFIGLIKFYRSAISPFTPSSCRFYPTCSEYGLEAIKRFGAFKGGILTIKRISKCHPFHPGGVDVVPDKVKNINNEKH
LEKGVIRNED
>Mature_90_residues
MKFIFIGLIKFYRSAISPFTPSSCRFYPTCSEYGLEAIKRFGAFKGGILTIKRISKCHPFHPGGVDVVPDKVKNINNEKH
LEKGVIRNED

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=66, Percent_Identity=57.5757575757576, Blast_Score=87, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1687_OCEIH (Q8EQL0)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692608.1
- GeneID:   1018183
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB1687
- NMPDR:   fig|221109.1.peg.1690
- HOGENOM:   HBG634291
- OMA:   LKRISKC
- BioCyc:   OIHE221109:OB1687-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 10205; Mature: 10205

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIFIGLIKFYRSAISPFTPSSCRFYPTCSEYGLEAIKRFGAFKGGILTIKRISKCHPF
CCHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
HPGGVDVVPDKVKNINNEKHLEKGVIRNED
CCCCCCCCCHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKFIFIGLIKFYRSAISPFTPSSCRFYPTCSEYGLEAIKRFGAFKGGILTIKRISKCHPF
CCHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
HPGGVDVVPDKVKNINNEKHLEKGVIRNED
CCCCCCCCCHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376