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The map label for this gene is sdaAB [H]

Identifier: 23098973

GI number: 23098973

Start: 1562042

End: 1562704

Strand: Direct

Name: sdaAB [H]

Synonym: OB1518

Alternate gene names: 23098973

Gene position: 1562042-1562704 (Clockwise)

Preceding gene: 23098971

Following gene: 23098974

Centisome position: 43.03

GC content: 37.1

Gene sequence:

>663_bases
ATGAAATATAATTCAGTGTTTGATATAATCGGTCCGGTTATGGTAGGGCCATCTAGCTCACATACAGCAGGTGCTGCTCG
TATAGGAAAAGCTGCAAGAAATCTATTTGGAAAACAGCCAAAATGGGCGAAAATTCATCTTTATGAATCTTTTGCAAAAA
CATACCGTGGTCATGGGACTGATTTCGCATTAGCCGGCGGATTATTAGGATTTGAAACAGATGATCCTCGTATGAATGAT
GCGTTAGAAATTGCCAAAGATCAAGGATTAGAAATCGAATTTATAGAAGACAGTGCCTCAGCAAGTCACCCGAATACGGC
ACGTCTTATTATTGGGGATGAAAATGACCAACAAGAATTGATGGGGATTTCTATAGGCGGAGGAAAAGTGGAAATTACTG
AGCTAAACGGTTTTGAATTGAGATTGTCTGGGAATCATCCTGCAATTTTAATTATGCACAATGATCGATTTGGTGCAATC
GCTTCCGTTACGAAAATACTTGCAAAACATGAAATTAACATTGGGCATATGGAAGTTAATCGGAAAGATGTTGGCAAAGA
AGCTTTAATGGTAATCGAAGTCGATCAAAATATAGAAGATGAAATACTAAATGAATTAAATGCAGCAGATCATATCATTT
CCATCTCAAAAATTGTAAGTTAA

Upstream 100 bases:

>100_bases
AAGGTATGTTCGTTTTGATTCATGAATTATATAGGGATTTTTGTTATACTTATGAAGTAAGAAGAGATATATAAAGTAAA
AAAATAGGCGGTGTTAACAC

Downstream 100 bases:

>100_bases
AGTGGTTTGATGTATCTCAAAGGAGGGTTTAACGATGTTTCGTACAGTTAAAGAGTTAGTTGACACAGCAAATGAAAAAC
AAATACCGATATCTGAAGTA

Product: L-serine dehydratase beta subunit

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKYNSVFDIIGPVMVGPSSSHTAGAARIGKAARNLFGKQPKWAKIHLYESFAKTYRGHGTDFALAGGLLGFETDDPRMND
ALEIAKDQGLEIEFIEDSASASHPNTARLIIGDENDQQELMGISIGGGKVEITELNGFELRLSGNHPAILIMHNDRFGAI
ASVTKILAKHEINIGHMEVNRKDVGKEALMVIEVDQNIEDEILNELNAADHIISISKIVS

Sequences:

>Translated_220_residues
MKYNSVFDIIGPVMVGPSSSHTAGAARIGKAARNLFGKQPKWAKIHLYESFAKTYRGHGTDFALAGGLLGFETDDPRMND
ALEIAKDQGLEIEFIEDSASASHPNTARLIIGDENDQQELMGISIGGGKVEITELNGFELRLSGNHPAILIMHNDRFGAI
ASVTKILAKHEINIGHMEVNRKDVGKEALMVIEVDQNIEDEILNELNAADHIISISKIVS
>Mature_220_residues
MKYNSVFDIIGPVMVGPSSSHTAGAARIGKAARNLFGKQPKWAKIHLYESFAKTYRGHGTDFALAGGLLGFETDDPRMND
ALEIAKDQGLEIEFIEDSASASHPNTARLIIGDENDQQELMGISIGGGKVEITELNGFELRLSGNHPAILIMHNDRFGAI
ASVTKILAKHEINIGHMEVNRKDVGKEALMVIEVDQNIEDEILNELNAADHIISISKIVS

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 23944; Mature: 23944

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNSVFDIIGPVMVGPSSSHTAGAARIGKAARNLFGKQPKWAKIHLYESFAKTYRGHGT
CCCCHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCC
DFALAGGLLGFETDDPRMNDALEIAKDQGLEIEFIEDSASASHPNTARLIIGDENDQQEL
CEEEECCEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHE
MGISIGGGKVEITELNGFELRLSGNHPAILIMHNDRFGAIASVTKILAKHEINIGHMEVN
EEEEECCCEEEEEECCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEC
RKDVGKEALMVIEVDQNIEDEILNELNAADHIISISKIVS
HHHCCCEEEEEEEECCCCHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MKYNSVFDIIGPVMVGPSSSHTAGAARIGKAARNLFGKQPKWAKIHLYESFAKTYRGHGT
CCCCHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCC
DFALAGGLLGFETDDPRMNDALEIAKDQGLEIEFIEDSASASHPNTARLIIGDENDQQEL
CEEEECCEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHE
MGISIGGGKVEITELNGFELRLSGNHPAILIMHNDRFGAIASVTKILAKHEINIGHMEVN
EEEEECCCEEEEEECCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEC
RKDVGKEALMVIEVDQNIEDEILNELNAADHIISISKIVS
HHHCCCEEEEEEEECCCCHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]