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The map label for this gene is ytcJ [H]

Identifier: 23098808

GI number: 23098808

Start: 1397666

End: 1399303

Strand: Reverse

Name: ytcJ [H]

Synonym: OB1353

Alternate gene names: 23098808

Gene position: 1399303-1397666 (Counterclockwise)

Preceding gene: 23098809

Following gene: 23098803

Centisome position: 38.54

GC content: 34.62

Gene sequence:

>1638_bases
ATGGATACGATAATTACAAATGCGAAAATTTTTACGATGAATCAGGAGAATGACGTTGTTGGGTCATTCTCTATTAAATC
TGGGAGGATAGATAAGATTTGGCACTCTCCTTCCCCTCCAAAAGAAGAATTAAATAGCGAAGAAACCAAACAAGTGGTTG
ATATGAAAGGAAAGACAATCCTGCCTGGATTTATCGACACACACAGCCATTTATTAATGTATTCTCTATTTAAGAAACAA
GCTGATTGTAGTTCACCTTTAAATCACTCAATATCCGATATCCTTGATCAGTTAAAACAAAAACTACATGAATTACCAGA
AGATGAATGGCTCTTAGGTTGGGGCTATGATAATACATTATTAAAAGAAAATAGACATCCTACGCGTGATGAACTAGATC
AGGTTTCAAAGGAGATTCCTATCCTAATTCGTCATACATCTGTTCATTTTGCAGTTGCAAATACAAAAGCTTTAGAAATT
GCAGAACTCCATAAAGATAGTAAAGATCCTCAAGGTGGACATCTAGGAAGAGATAATGCAGGTGAGTTAAATGGAGTTCT
CTATGAATTACCTGCCTTAGACTTAGTTCAAGCAGTTATTCCTAAGCCTTCCGCGGAAGAAATGGCTAATTCGATAGAGC
TTGGAGCTAATGATTATCTTTCTGAAGGTATTACTACTTGTACAGACGCAGGTGTTGGTCTTGATTTAGGTATAGCTGAG
TACGATGCTCATATTAAGGCTGTAAAAACATCAAAAAATCCTATGCGCATGCGTTTTATGATTTTATATCATTTATTAAA
TACTCATTTTAAAAATAAAAATGCCAGCGAACTAAATAATGATATTATGAGAGAAACAAATAATTGGGCAGCGTTAGATA
GTGCAAAATTATTTCAAGATGGTTCCATTCAGGGATTTACCGCATCTTTAAGAGAACCTTATTATACGAAACCTTTTGAA
CATGGTGAATTACTTCATGAACAAACTCACTTTGAAGAAATTCTCCTGAGTCTCCATCAAAGAGGATTTCGTTTAGCTAT
ACATGGTAATGGAGACCAAGCGATCTCTTCTATTTTAAAAGGATATGAACGCATTTTATCTATAACACCTAAAGAAAATC
ATTTACATCGAATAGAACATGTGCAAACTGCAACTGAAGAAGACTTGGATAAGATGAAAAAACTCGATGTAGCGGCATCA
TTTTTCATAAATCATATCTACTATTGGGCTGACCGCCATAATAAATATTTCTTGGGACCTGAACGAACTTCAAGACTAAA
TCCATTAAAAGATGCTACCGATCGTGAAATTCTCTATACACTACATTCGGATTGCCCTATCACACCTATCTCGCCATTGT
TTTCAGTTTGGGCAGCAGTAAATCGTATAAGTATGGAACAAAAAGTATTTGGAGAGAATCAACGTATCTCCGTTAAAAAG
GCAATTGAAACGATGACAATTGATGGCGCTAGACTAAATAATGATGAAGAAAATAGCGGAAGTTTAGAAGCTGGAAAACT
TGCTGACTTCATTGTACTTGATAACAACCCATTTGAAGTTGATAAAATGGATATTAAAAATATAAAAGTACTTCAGACAT
TTATATCTGGAGAAAAGGTTTATCAAAGAAAATGTTAA

Upstream 100 bases:

>100_bases
GATAATTCTGAACAAGTCAGAGCAGTTTATTGGAATGACCTTAATTCCGCAAACCCTTCAGAAACAAAATCTGAACAATA
AAGGAGTAAACATTATTTCT

Downstream 100 bases:

>100_bases
ACGTACTAGCAAATCTGAAGGATTATTTTCGTTAAGTACTGTTGTTCTAAGTCAAATGTTGGGGATGAGACAAAAGTATT
TAATCAAAAGAGAAATCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MDTIITNAKIFTMNQENDVVGSFSIKSGRIDKIWHSPSPPKEELNSEETKQVVDMKGKTILPGFIDTHSHLLMYSLFKKQ
ADCSSPLNHSISDILDQLKQKLHELPEDEWLLGWGYDNTLLKENRHPTRDELDQVSKEIPILIRHTSVHFAVANTKALEI
AELHKDSKDPQGGHLGRDNAGELNGVLYELPALDLVQAVIPKPSAEEMANSIELGANDYLSEGITTCTDAGVGLDLGIAE
YDAHIKAVKTSKNPMRMRFMILYHLLNTHFKNKNASELNNDIMRETNNWAALDSAKLFQDGSIQGFTASLREPYYTKPFE
HGELLHEQTHFEEILLSLHQRGFRLAIHGNGDQAISSILKGYERILSITPKENHLHRIEHVQTATEEDLDKMKKLDVAAS
FFINHIYYWADRHNKYFLGPERTSRLNPLKDATDREILYTLHSDCPITPISPLFSVWAAVNRISMEQKVFGENQRISVKK
AIETMTIDGARLNNDEENSGSLEAGKLADFIVLDNNPFEVDKMDIKNIKVLQTFISGEKVYQRKC

Sequences:

>Translated_545_residues
MDTIITNAKIFTMNQENDVVGSFSIKSGRIDKIWHSPSPPKEELNSEETKQVVDMKGKTILPGFIDTHSHLLMYSLFKKQ
ADCSSPLNHSISDILDQLKQKLHELPEDEWLLGWGYDNTLLKENRHPTRDELDQVSKEIPILIRHTSVHFAVANTKALEI
AELHKDSKDPQGGHLGRDNAGELNGVLYELPALDLVQAVIPKPSAEEMANSIELGANDYLSEGITTCTDAGVGLDLGIAE
YDAHIKAVKTSKNPMRMRFMILYHLLNTHFKNKNASELNNDIMRETNNWAALDSAKLFQDGSIQGFTASLREPYYTKPFE
HGELLHEQTHFEEILLSLHQRGFRLAIHGNGDQAISSILKGYERILSITPKENHLHRIEHVQTATEEDLDKMKKLDVAAS
FFINHIYYWADRHNKYFLGPERTSRLNPLKDATDREILYTLHSDCPITPISPLFSVWAAVNRISMEQKVFGENQRISVKK
AIETMTIDGARLNNDEENSGSLEAGKLADFIVLDNNPFEVDKMDIKNIKVLQTFISGEKVYQRKC
>Mature_545_residues
MDTIITNAKIFTMNQENDVVGSFSIKSGRIDKIWHSPSPPKEELNSEETKQVVDMKGKTILPGFIDTHSHLLMYSLFKKQ
ADCSSPLNHSISDILDQLKQKLHELPEDEWLLGWGYDNTLLKENRHPTRDELDQVSKEIPILIRHTSVHFAVANTKALEI
AELHKDSKDPQGGHLGRDNAGELNGVLYELPALDLVQAVIPKPSAEEMANSIELGANDYLSEGITTCTDAGVGLDLGIAE
YDAHIKAVKTSKNPMRMRFMILYHLLNTHFKNKNASELNNDIMRETNNWAALDSAKLFQDGSIQGFTASLREPYYTKPFE
HGELLHEQTHFEEILLSLHQRGFRLAIHGNGDQAISSILKGYERILSITPKENHLHRIEHVQTATEEDLDKMKKLDVAAS
FFINHIYYWADRHNKYFLGPERTSRLNPLKDATDREILYTLHSDCPITPISPLFSVWAAVNRISMEQKVFGENQRISVKK
AIETMTIDGARLNNDEENSGSLEAGKLADFIVLDNNPFEVDKMDIKNIKVLQTFISGEKVYQRKC

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 61808; Mature: 61808

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIITNAKIFTMNQENDVVGSFSIKSGRIDKIWHSPSPPKEELNSEETKQVVDMKGKTI
CCCEEECCEEEEECCCCCEEEEEEECCCCCHHCCCCCCCCHHHCCHHHHHHHHHCCCCEE
LPGFIDTHSHLLMYSLFKKQADCSSPLNHSISDILDQLKQKLHELPEDEWLLGWGYDNTL
CCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
LKENRHPTRDELDQVSKEIPILIRHTSVHFAVANTKALEIAELHKDSKDPQGGHLGRDNA
HCCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC
GELNGVLYELPALDLVQAVIPKPSAEEMANSIELGANDYLSEGITTCTDAGVGLDLGIAE
CCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCCCHHH
YDAHIKAVKTSKNPMRMRFMILYHLLNTHFKNKNASELNNDIMRETNNWAALDSAKLFQD
HCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCHHHHCC
GSIQGFTASLREPYYTKPFEHGELLHEQTHFEEILLSLHQRGFRLAIHGNGDQAISSILK
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
GYERILSITPKENHLHRIEHVQTATEEDLDKMKKLDVAASFFINHIYYWADRHNKYFLGP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECC
ERTSRLNPLKDATDREILYTLHSDCPITPISPLFSVWAAVNRISMEQKVFGENQRISVKK
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
AIETMTIDGARLNNDEENSGSLEAGKLADFIVLDNNPFEVDKMDIKNIKVLQTFISGEKV
HHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHCCHHH
YQRKC
HHCCC
>Mature Secondary Structure
MDTIITNAKIFTMNQENDVVGSFSIKSGRIDKIWHSPSPPKEELNSEETKQVVDMKGKTI
CCCEEECCEEEEECCCCCEEEEEEECCCCCHHCCCCCCCCHHHCCHHHHHHHHHCCCCEE
LPGFIDTHSHLLMYSLFKKQADCSSPLNHSISDILDQLKQKLHELPEDEWLLGWGYDNTL
CCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
LKENRHPTRDELDQVSKEIPILIRHTSVHFAVANTKALEIAELHKDSKDPQGGHLGRDNA
HCCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC
GELNGVLYELPALDLVQAVIPKPSAEEMANSIELGANDYLSEGITTCTDAGVGLDLGIAE
CCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCCCHHH
YDAHIKAVKTSKNPMRMRFMILYHLLNTHFKNKNASELNNDIMRETNNWAALDSAKLFQD
HCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCHHHHCC
GSIQGFTASLREPYYTKPFEHGELLHEQTHFEEILLSLHQRGFRLAIHGNGDQAISSILK
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
GYERILSITPKENHLHRIEHVQTATEEDLDKMKKLDVAASFFINHIYYWADRHNKYFLGP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECC
ERTSRLNPLKDATDREILYTLHSDCPITPISPLFSVWAAVNRISMEQKVFGENQRISVKK
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
AIETMTIDGARLNNDEENSGSLEAGKLADFIVLDNNPFEVDKMDIKNIKVLQTFISGEKV
HHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHCCHHH
YQRKC
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]