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The map label for this gene is yycB [H]

Identifier: 23098728

GI number: 23098728

Start: 1316545

End: 1317753

Strand: Reverse

Name: yycB [H]

Synonym: OB1273

Alternate gene names: 23098728

Gene position: 1317753-1316545 (Counterclockwise)

Preceding gene: 23098729

Following gene: 23098716

Centisome position: 36.3

GC content: 36.31

Gene sequence:

>1209_bases
ATGCAACGTATTTCAAATTCGACAAAACAGCGTTATTATACATTTCTATTAATTTTAGCAATTCTTTTTATAGCTTCTAC
ACTACGTTCCCCTATCACCTCCGTTGGTCCATTAATTCCAATATTTCGAAATGAATTAGAAGTAACAAATGCCATGATCG
GTTTAATTAACACATTACCACTTATAGCATTTGGAATTTTTTCTTCATTTGTTCCTACTTTATCTAGAAAACTTGGAATG
GAGATTACGTTATTAATGGCAATGGTGGTTCTATCCATCGGTATATACATTCGATCCATTGGTGATATATCCATGTTATT
ATTCGGTACACTGTTATTGGGAATAGCGATATCTGTGGGAAATGTACTAATGCCAGGATTAATAAAATCAAGCTTCCCAT
ATCGTATTGGACTCATGACTGGTATTTATTCTGTTTCCATGAATTTATTTGCGGCGCTAGCTTCAGGGATTTCCGTACCA
ATAACTACGATACCTTCCCTAGATTGGCGAAATGCAATGCAATTATGGAGCATTATTTCTATAATTGCGGTAGTTGTATT
AGTTCTTCGCTTACCAGTAATACGATCCTCTCGCAAAAAAGTATTTGTAGAGATGAAGAGTCAGCCTCCTACTGCATTAT
TCAAATCTAAAATAGCATGGGCTGTCACATTCTTTATGGGTTTTCAATCATTTATTCCTTATAGTCTTTTTACATGGTTG
CCTGACATTTTATTAGCAAAAGGATTTTCTGAAAGTGATGCTGGTTGGTTAATAGCAATTTTACAGATGGGAATTATACC
AACAACCTTTGTCGCACCTATTCTTGCAGCAAAAATGAATAATCAAAGAGTGATCGGTTGTACCGCTGGACTCCTATTTT
TTAGTGGTCTACTCGGGATAACTCTGACTTCATCTAATCTTCTTATCGCATTCTTAATCTTAACTGGAATTGGAGCTGGG
ACAGCATTCAGTTTAGCCATGATGTTTTTCGTGCTTCGTACCGAGACAGTGGAGCAATCGTCACAGTTATCTAGCATGGC
ACAATCGATCGGTTATATGGTTGCTGCGATCGGACCATTACTTATGGGATCAATTTCTGAATGGACCAATGGTTGGACTA
TTCCTTTAGTAATGTTAATGAGTGTAGCTTTATGTATTGCTATACTCGGAACCATCGCGGGGAAAAATGAAAAAATAAAA
TTTGATTAA

Upstream 100 bases:

>100_bases
AAATAATCAATAATTATTAACTTTCTCCTTTTGCTTAATTTATGTATAATTAACTTTTGATATATTAGCTAACGAAGATT
AATCATAAGGGAGAAACACC

Downstream 100 bases:

>100_bases
ATAGTGAACGGAACTACCTTCCCTTGAAATGGAAGGTAGTTCTTTTACTTTTTAGCAGATATTCTCCAGGTCAATTAGTC
CATTCAGCAATGAGTTACCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MQRISNSTKQRYYTFLLILAILFIASTLRSPITSVGPLIPIFRNELEVTNAMIGLINTLPLIAFGIFSSFVPTLSRKLGM
EITLLMAMVVLSIGIYIRSIGDISMLLFGTLLLGIAISVGNVLMPGLIKSSFPYRIGLMTGIYSVSMNLFAALASGISVP
ITTIPSLDWRNAMQLWSIISIIAVVVLVLRLPVIRSSRKKVFVEMKSQPPTALFKSKIAWAVTFFMGFQSFIPYSLFTWL
PDILLAKGFSESDAGWLIAILQMGIIPTTFVAPILAAKMNNQRVIGCTAGLLFFSGLLGITLTSSNLLIAFLILTGIGAG
TAFSLAMMFFVLRTETVEQSSQLSSMAQSIGYMVAAIGPLLMGSISEWTNGWTIPLVMLMSVALCIAILGTIAGKNEKIK
FD

Sequences:

>Translated_402_residues
MQRISNSTKQRYYTFLLILAILFIASTLRSPITSVGPLIPIFRNELEVTNAMIGLINTLPLIAFGIFSSFVPTLSRKLGM
EITLLMAMVVLSIGIYIRSIGDISMLLFGTLLLGIAISVGNVLMPGLIKSSFPYRIGLMTGIYSVSMNLFAALASGISVP
ITTIPSLDWRNAMQLWSIISIIAVVVLVLRLPVIRSSRKKVFVEMKSQPPTALFKSKIAWAVTFFMGFQSFIPYSLFTWL
PDILLAKGFSESDAGWLIAILQMGIIPTTFVAPILAAKMNNQRVIGCTAGLLFFSGLLGITLTSSNLLIAFLILTGIGAG
TAFSLAMMFFVLRTETVEQSSQLSSMAQSIGYMVAAIGPLLMGSISEWTNGWTIPLVMLMSVALCIAILGTIAGKNEKIK
FD
>Mature_402_residues
MQRISNSTKQRYYTFLLILAILFIASTLRSPITSVGPLIPIFRNELEVTNAMIGLINTLPLIAFGIFSSFVPTLSRKLGM
EITLLMAMVVLSIGIYIRSIGDISMLLFGTLLLGIAISVGNVLMPGLIKSSFPYRIGLMTGIYSVSMNLFAALASGISVP
ITTIPSLDWRNAMQLWSIISIIAVVVLVLRLPVIRSSRKKVFVEMKSQPPTALFKSKIAWAVTFFMGFQSFIPYSLFTWL
PDILLAKGFSESDAGWLIAILQMGIIPTTFVAPILAAKMNNQRVIGCTAGLLFFSGLLGITLTSSNLLIAFLILTGIGAG
TAFSLAMMFFVLRTETVEQSSQLSSMAQSIGYMVAAIGPLLMGSISEWTNGWTIPLVMLMSVALCIAILGTIAGKNEKIK
FD

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=396, Percent_Identity=35.3535353535354, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI1786536, Length=348, Percent_Identity=22.4137931034483, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43640; Mature: 43640

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRISNSTKQRYYTFLLILAILFIASTLRSPITSVGPLIPIFRNELEVTNAMIGLINTLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LIAFGIFSSFVPTLSRKLGMEITLLMAMVVLSIGIYIRSIGDISMLLFGTLLLGIAISVG
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVLMPGLIKSSFPYRIGLMTGIYSVSMNLFAALASGISVPITTIPSLDWRNAMQLWSIIS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHH
IIAVVVLVLRLPVIRSSRKKVFVEMKSQPPTALFKSKIAWAVTFFMGFQSFIPYSLFTWL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PDILLAKGFSESDAGWLIAILQMGIIPTTFVAPILAAKMNNQRVIGCTAGLLFFSGLLGI
HHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
TLTSSNLLIAFLILTGIGAGTAFSLAMMFFVLRTETVEQSSQLSSMAQSIGYMVAAIGPL
HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMGSISEWTNGWTIPLVMLMSVALCIAILGTIAGKNEKIKFD
HHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQRISNSTKQRYYTFLLILAILFIASTLRSPITSVGPLIPIFRNELEVTNAMIGLINTLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LIAFGIFSSFVPTLSRKLGMEITLLMAMVVLSIGIYIRSIGDISMLLFGTLLLGIAISVG
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVLMPGLIKSSFPYRIGLMTGIYSVSMNLFAALASGISVPITTIPSLDWRNAMQLWSIIS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHH
IIAVVVLVLRLPVIRSSRKKVFVEMKSQPPTALFKSKIAWAVTFFMGFQSFIPYSLFTWL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PDILLAKGFSESDAGWLIAILQMGIIPTTFVAPILAAKMNNQRVIGCTAGLLFFSGLLGI
HHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
TLTSSNLLIAFLILTGIGAGTAFSLAMMFFVLRTETVEQSSQLSSMAQSIGYMVAAIGPL
HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMGSISEWTNGWTIPLVMLMSVALCIAILGTIAGKNEKIKFD
HHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]