Click here to switch to the map view.

The map label for this gene is 23098453

Identifier: 23098453

GI number: 23098453

Start: 1042323

End: 1042793

Strand: Direct

Name: 23098453

Synonym: OB0998

Alternate gene names: NA

Gene position: 1042323-1042793 (Clockwise)

Preceding gene: 23098452

Following gene: 23098454

Centisome position: 28.71

GC content: 34.61

Gene sequence:

>471_bases
ATGGATAGAATGTTTAACTTCAAATCAGAAGTAAAACCAGAATGGGTAGATTATAACGGTCATATGAATGATGCCGCATA
TGCTGCTGTTTTCAGTTATGCAGTGGATTCTTTAATGGAGTTTTTTGGCCTGACGAAAGAAGTCATCGAGAATGAAAAAT
ACACACTGTTTACTTTGGAAACGCATCTTTGTTACTTAAATGAAGCTTATTTAGGTGAAGAACTTCACGTAGATTTGCAA
TTGTTGGATGTAGATTCCAAACGATTACATGCATTTTTTACGATGAAAAATGCAAAAGAAGTTGTTATTGCAACCAGTGA
GCAAATGCTTATGGGGATGGATCAAGAAATAGGAAAGCCAGCACCGTTTCTACCTCATGTAAAAGAAAATATTGATCATG
TTTGGAATAACCATCAATGGATAGAGAAACCGAAACAAGCAGGAAGAGTAATAGGAATAAAGAAAAAATAA

Upstream 100 bases:

>100_bases
GATCGGTCTGTCGAAGAGTTAGAGAAAAAGAGAAATGAATTTTTAGTAAAACTTATTGATCTTGTCGAAGATTATTGGCC
ATAAGAGGTGACATGAAAAG

Downstream 100 bases:

>100_bases
TAATTTATTGTGAAATTTGAAGGAGAGTATACATGAATAAGATTGAAGTAAATCAATTAACGAAGATTTTTGGCTCTCAT
TCAAAAAAAGGATTACAACT

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; Thioesterase-Like Protein; 3-Hydroxyacyl-CoA Dehydrogenase C-Terminal Domain Family; Thioesterase Family Protein; Thioesterase-Like; 3-Hydroxyacyl-CoA Dehydrogenase Protein; 3-Hydroxybutyryl-CoA Dehydrogenase; 3-Hydroxyacyl-CoA Dehydrogenase; Lipolytic G-D-S-L; Thioesterase FcbC-Like; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDRMFNFKSEVKPEWVDYNGHMNDAAYAAVFSYAVDSLMEFFGLTKEVIENEKYTLFTLETHLCYLNEAYLGEELHVDLQ
LLDVDSKRLHAFFTMKNAKEVVIATSEQMLMGMDQEIGKPAPFLPHVKENIDHVWNNHQWIEKPKQAGRVIGIKKK

Sequences:

>Translated_156_residues
MDRMFNFKSEVKPEWVDYNGHMNDAAYAAVFSYAVDSLMEFFGLTKEVIENEKYTLFTLETHLCYLNEAYLGEELHVDLQ
LLDVDSKRLHAFFTMKNAKEVVIATSEQMLMGMDQEIGKPAPFLPHVKENIDHVWNNHQWIEKPKQAGRVIGIKKK
>Mature_156_residues
MDRMFNFKSEVKPEWVDYNGHMNDAAYAAVFSYAVDSLMEFFGLTKEVIENEKYTLFTLETHLCYLNEAYLGEELHVDLQ
LLDVDSKRLHAFFTMKNAKEVVIATSEQMLMGMDQEIGKPAPFLPHVKENIDHVWNNHQWIEKPKQAGRVIGIKKK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18171; Mature: 18171

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRMFNFKSEVKPEWVDYNGHMNDAAYAAVFSYAVDSLMEFFGLTKEVIENEKYTLFTLE
CCCCCCCHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEE
THLCYLNEAYLGEELHVDLQLLDVDSKRLHAFFTMKNAKEVVIATSEQMLMGMDQEIGKP
EHEEEHHHHHCCCEEEEEEEEEECCCHHEEEEEEECCCCEEEEECCHHHHHCCCHHHCCC
APFLPHVKENIDHVWNNHQWIEKPKQAGRVIGIKKK
CCCCCHHHHHHHHHHCCCHHHHCHHHCCCEEEEECC
>Mature Secondary Structure
MDRMFNFKSEVKPEWVDYNGHMNDAAYAAVFSYAVDSLMEFFGLTKEVIENEKYTLFTLE
CCCCCCCHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEE
THLCYLNEAYLGEELHVDLQLLDVDSKRLHAFFTMKNAKEVVIATSEQMLMGMDQEIGKP
EHEEEHHHHHCCCEEEEEEEEEECCCHHEEEEEEECCCCEEEEECCHHHHHCCCHHHCCC
APFLPHVKENIDHVWNNHQWIEKPKQAGRVIGIKKK
CCCCCHHHHHHHHHHCCCHHHHCHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA