Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 23098231

GI number: 23098231

Start: 830544

End: 831416

Strand: Direct

Name: ycjP [C]

Synonym: OB0776

Alternate gene names: 23098231

Gene position: 830544-831416 (Clockwise)

Preceding gene: 23098230

Following gene: 23098232

Centisome position: 22.88

GC content: 35.51

Gene sequence:

>873_bases
ATGGAGTCCATTGTTACTACAAAAAATAACCGACGTACCAATGGAAAGTTGAAAAAACGACTATCAAGAATCATCATCTA
TACCTTGCTGGGCCTATTCGCAATTGTAAATGTCTACCCAATTATATGGATGGCAATCAACTCTTTTAAGTCTGAGCAGG
AATTTACGGTGAATCAGTTCGGTTTTCCAAATGAATTTATATTGGAAAATTATGCAAATGCATGGGAAATAGCTAATCTT
GGTGTATTGTTCAAAAATAGTATATTCGTCTGTGTCACAGCTACACTTGTCACCGTAATTATCGGTGCATTGGCATCGTA
TTTCCTAGCTAGATTCAAGTTTAGATTTAATAAGATAATGTATACATTTTTTATATTTGGTTTATTAATTCCGATTCACG
CTACGCTCGTTCCGATGTTTATTCTGATGAAAAACCTCGGATTGCTTAATACTGAAATTACATTATTATTCCCGTATGTG
GCTTTCCATCTGCCAATTACAATATTTATTTTAACAAGTTTTATGAAAGCTTTTCCAAAGGATATTGAGGAATCGGCAAT
TATGGATGGGGCTGGGATATTTCGAATCTTTTGGTCGATTATCCTTCCTATGTCAAGACCAGCAATAGCTACGGTTGTTA
TTCTTAATTTCATCTATAACTGGAATGAGTTTTCTTTTGCATTAGTACTAATTAATGATCCAGCGTTGCAAACATTGCCA
CTTGGATTAGCTAATTTTGCTGGTCAGTTTACAACCAACTATGGGGCACAGATGGCAGGATTAACGATGTCACTAGTTCC
GATTGTCATCTTCTATTTATTCTTGGAGAAAGAGATTGTGAATGGAATGACTTCTGGAGCCGTAAAGGGTTAA

Upstream 100 bases:

>100_bases
CGGTAGTGCAGTTTCTGTATTTATTTTCTTCTTTAGTCTCATTTTAATTTTTATAGTTACGAAATTACTCGGGAAGAAAA
TGATATGAGGAGGGATGTAT

Downstream 100 bases:

>100_bases
TGAGGAATTAACTGTTAAAGGACTAGATTGGATGAAAAAGTGGGGATTAAAAAGAAAGTTCATTACATTTTTTCTTGCAT
TAATGATACCGATATTGTTT

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MESIVTTKNNRRTNGKLKKRLSRIIIYTLLGLFAIVNVYPIIWMAINSFKSEQEFTVNQFGFPNEFILENYANAWEIANL
GVLFKNSIFVCVTATLVTVIIGALASYFLARFKFRFNKIMYTFFIFGLLIPIHATLVPMFILMKNLGLLNTEITLLFPYV
AFHLPITIFILTSFMKAFPKDIEESAIMDGAGIFRIFWSIILPMSRPAIATVVILNFIYNWNEFSFALVLINDPALQTLP
LGLANFAGQFTTNYGAQMAGLTMSLVPIVIFYLFLEKEIVNGMTSGAVKG

Sequences:

>Translated_290_residues
MESIVTTKNNRRTNGKLKKRLSRIIIYTLLGLFAIVNVYPIIWMAINSFKSEQEFTVNQFGFPNEFILENYANAWEIANL
GVLFKNSIFVCVTATLVTVIIGALASYFLARFKFRFNKIMYTFFIFGLLIPIHATLVPMFILMKNLGLLNTEITLLFPYV
AFHLPITIFILTSFMKAFPKDIEESAIMDGAGIFRIFWSIILPMSRPAIATVVILNFIYNWNEFSFALVLINDPALQTLP
LGLANFAGQFTTNYGAQMAGLTMSLVPIVIFYLFLEKEIVNGMTSGAVKG
>Mature_290_residues
MESIVTTKNNRRTNGKLKKRLSRIIIYTLLGLFAIVNVYPIIWMAINSFKSEQEFTVNQFGFPNEFILENYANAWEIANL
GVLFKNSIFVCVTATLVTVIIGALASYFLARFKFRFNKIMYTFFIFGLLIPIHATLVPMFILMKNLGLLNTEITLLFPYV
AFHLPITIFILTSFMKAFPKDIEESAIMDGAGIFRIFWSIILPMSRPAIATVVILNFIYNWNEFSFALVLINDPALQTLP
LGLANFAGQFTTNYGAQMAGLTMSLVPIVIFYLFLEKEIVNGMTSGAVKG

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=32.3843416370107, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1789860, Length=232, Percent_Identity=25, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=27.9620853080569, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787368, Length=198, Percent_Identity=26.2626262626263, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32775; Mature: 32775

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIVTTKNNRRTNGKLKKRLSRIIIYTLLGLFAIVNVYPIIWMAINSFKSEQEFTVNQF
CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
GFPNEFILENYANAWEIANLGVLFKNSIFVCVTATLVTVIIGALASYFLARFKFRFNKIM
CCCHHHHHHHCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTFFIFGLLIPIHATLVPMFILMKNLGLLNTEITLLFPYVAFHLPITIFILTSFMKAFPK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DIEESAIMDGAGIFRIFWSIILPMSRPAIATVVILNFIYNWNEFSFALVLINDPALQTLP
CHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHC
LGLANFAGQFTTNYGAQMAGLTMSLVPIVIFYLFLEKEIVNGMTSGAVKG
CHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MESIVTTKNNRRTNGKLKKRLSRIIIYTLLGLFAIVNVYPIIWMAINSFKSEQEFTVNQF
CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
GFPNEFILENYANAWEIANLGVLFKNSIFVCVTATLVTVIIGALASYFLARFKFRFNKIM
CCCHHHHHHHCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTFFIFGLLIPIHATLVPMFILMKNLGLLNTEITLLFPYVAFHLPITIFILTSFMKAFPK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DIEESAIMDGAGIFRIFWSIILPMSRPAIATVVILNFIYNWNEFSFALVLINDPALQTLP
CHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHC
LGLANFAGQFTTNYGAQMAGLTMSLVPIVIFYLFLEKEIVNGMTSGAVKG
CHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]