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The map label for this gene is yraA [H]

Identifier: 23098158

GI number: 23098158

Start: 743538

End: 744050

Strand: Direct

Name: yraA [H]

Synonym: OB0703

Alternate gene names: 23098158

Gene position: 743538-744050 (Clockwise)

Preceding gene: 23098157

Following gene: 23098160

Centisome position: 20.48

GC content: 36.65

Gene sequence:

>513_bases
ATGAGTAAACACATTGCAGTATTAGTTACAGATATGGTGGAAGAAATCGAATTAACTGATCCAGTTAAAGCTTATAAAGA
AGCAGGCCATACGGTAGACATTATTAGTAATGAAGGAAATAAAACGATTAATGGTAAAAATGGAGATAAAATTGAAGCAG
ACAAAGGTATTAACGATGTAGACCCATCTGCTTATGACGCATTATTAGTACCAGGTGGATTCTCTCCAGACTTACTTCGC
ATTGATCCGAAAAATGGAGAATTTGCAAAAGCATTTATGAAAGACAATAAACCAGTGTTCGCGATTTGTCACGGTCCTCA
ATTCTTAGTGGAAACGGACTTGCTCAAAGGTAAAACATTAACTAGCTTTGTTTCTGTGAGAAAAGACCTTGAAAACGCAG
GTGCCACAGTTAAAGATGAAGAAGTAGTCGTAGATGGTAATCTTGTAACAAGCAGAACACCGGATGATTTACCAGCATTC
AACCGCGAATCACTAAAATTGCTTGAAAAATAA

Upstream 100 bases:

>100_bases
GTGTACGAGGTTGGGTGCAGATGTTTCAACAGTAAAAATTCGGGTACACTACTCATAGGTCTTGAAGGATTACCTTTAAT
AATGAAAGGATGAGTTAAAC

Downstream 100 bases:

>100_bases
ACTTCAATAACAGGAAAAGGGGCTGGTAACATCCACCCCTTTTTCTTTTTGGTCATTTATTGCCCGATTGTTACTTTATT
TATTTTTTTCTTTACGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSKHIAVLVTDMVEEIELTDPVKAYKEAGHTVDIISNEGNKTINGKNGDKIEADKGINDVDPSAYDALLVPGGFSPDLLR
IDPKNGEFAKAFMKDNKPVFAICHGPQFLVETDLLKGKTLTSFVSVRKDLENAGATVKDEEVVVDGNLVTSRTPDDLPAF
NRESLKLLEK

Sequences:

>Translated_170_residues
MSKHIAVLVTDMVEEIELTDPVKAYKEAGHTVDIISNEGNKTINGKNGDKIEADKGINDVDPSAYDALLVPGGFSPDLLR
IDPKNGEFAKAFMKDNKPVFAICHGPQFLVETDLLKGKTLTSFVSVRKDLENAGATVKDEEVVVDGNLVTSRTPDDLPAF
NRESLKLLEK
>Mature_169_residues
SKHIAVLVTDMVEEIELTDPVKAYKEAGHTVDIISNEGNKTINGKNGDKIEADKGINDVDPSAYDALLVPGGFSPDLLRI
DPKNGEFAKAFMKDNKPVFAICHGPQFLVETDLLKGKTLTSFVSVRKDLENAGATVKDEEVVVDGNLVTSRTPDDLPAFN
RESLKLLEK

Specific function: Functions in the protection against aldehyde-stress, possibly by degrading damaged proteins [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=170, Percent_Identity=52.3529411764706, Blast_Score=177, Evalue=4e-46,
Organism=Drosophila melanogaster, GI28571932, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 18525; Mature: 18394

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHIAVLVTDMVEEIELTDPVKAYKEAGHTVDIISNEGNKTINGKNGDKIEADKGINDV
CCCCEEEHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCEEECCCCCCEEECCCCCCCC
DPSAYDALLVPGGFSPDLLRIDPKNGEFAKAFMKDNKPVFAICHGPQFLVETDLLKGKTL
CCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHCCCCCEEEEECCCCEEEEHHHHCCCHH
TSFVSVRKDLENAGATVKDEEVVVDGNLVTSRTPDDLPAFNRESLKLLEK
HHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SKHIAVLVTDMVEEIELTDPVKAYKEAGHTVDIISNEGNKTINGKNGDKIEADKGINDV
CCCEEEHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCEEECCCCCCEEECCCCCCCC
DPSAYDALLVPGGFSPDLLRIDPKNGEFAKAFMKDNKPVFAICHGPQFLVETDLLKGKTL
CCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHCCCCCEEEEECCCCEEEEHHHHCCCHH
TSFVSVRKDLENAGATVKDEEVVVDGNLVTSRTPDDLPAFNRESLKLLEK
HHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9384377; 10568751 [H]