| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yitJ [H]
Identifier: 23098146
GI number: 23098146
Start: 727207
End: 728256
Strand: Direct
Name: yitJ [H]
Synonym: OB0691
Alternate gene names: 23098146
Gene position: 727207-728256 (Clockwise)
Preceding gene: 23098144
Following gene: 23098149
Centisome position: 20.03
GC content: 39.43
Gene sequence:
>1050_bases ATGAAGCGGAGTTTACAAAGACGTTTGCAAGAAGGCACGGTAATAGCAGGAGAAGGGTATTTATTTGAATTAGAGAGGAG GGGGTACTTACAGGCAGGTTCGTTTGTACCAGAAGTAGCCCTTGAAAATCCGGATGCGTTAAAACAGACGTATCGTGATT TTATGAACGCTGGTTCGGATGTTGTATTAGCATTTACATATAATGCACATCGAGAGAAAATGCGTATTATTGGTAAGGAA CAATTACTAGAACCGTTGAACAGAAGTGCTATTCGTTTAGCGAAAGAAGTAGCCAAAGAACATCCACAGGAAGAAGCATT AGTTGCAGGAAATATTTCTAATACAAATATCTTTGACCCTAATGATGAATCAAGCAAACATAAAGTGAGAGAGATGTTTG CCGAAATGGCACAGTGGAGTAAAGAAGAAGACGTTGATTTTATAAATGGGGAAACGTTCTATTATCATGAAGAGGCAGAG ATTGCTTTGGAAGAAATATTGAAAAAAGACTTGCCAGCTGTCATCACACTAGGATTAATGGGAGAGAACATCTTAAGAGA TTGCTATACAGTAGAAGAATCGTGTAAGATATTATCGGAAAAAGGAGCCCTTGTTGTTGGCATGAATTGTTTCCGAGGTC CAGATACAATGCAGCCTTATATCGCAAAAATTAGACAGCATGTAGACGGTTATGTAGGTGCATTACCTATTCCATATCGT ACATCAAATGAGCATCCGACTTTTTTCAATTTACCTGATGGTGGGTGTAGCTGTCATCTCCCTACTGAGACCACTTTTCC AACTGCATTAGATCCACTGTACCATAACCGTTATGAACTGGCAGCATGGGCTAAAGAAGCAAAAGAAATCGGTGTTAATT ATATCGGATTATGCTGTGGGGCTTCTCCAGCTATGCTAAGAGCTGTTGCAGAGTCTGTTGGGAAAGAGACCGTTAATTCT CCTTATTCTCCTGACATGGAGAAACATTTCTTGTTTGGTAAGGATAAAAGTTTAAAAGAGCATAACGTAGGTTATCGATT CAAGGCATAA
Upstream 100 bases:
>100_bases GGCTTACAAGCCTTAAAGATAAGAAGAGCTATGTATTTTAACCCTTCTTCTTACTTTTAGAAGAGGGGTTTTTTGATTTT TAGAATAGGAGGAGATTATT
Downstream 100 bases:
>100_bases TATCGTCATTTCTCTGGAGGATTTATTAGCGTATTGGAAAAATCAAAGAGGTTGATGGGTGTGGCAATTATGAGGGAGAC AGATAAATCCTCTAACTTGA
Product: betaine-homocysteine methyltransferase
Products: NA
Alternate protein names: Homocysteine S-methyltransferase; S-methylmethionine:homocysteine methyltransferase; 5,10-methylenetetrahydrofolate reductase [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKRSLQRRLQEGTVIAGEGYLFELERRGYLQAGSFVPEVALENPDALKQTYRDFMNAGSDVVLAFTYNAHREKMRIIGKE QLLEPLNRSAIRLAKEVAKEHPQEEALVAGNISNTNIFDPNDESSKHKVREMFAEMAQWSKEEDVDFINGETFYYHEEAE IALEEILKKDLPAVITLGLMGENILRDCYTVEESCKILSEKGALVVGMNCFRGPDTMQPYIAKIRQHVDGYVGALPIPYR TSNEHPTFFNLPDGGCSCHLPTETTFPTALDPLYHNRYELAAWAKEAKEIGVNYIGLCCGASPAMLRAVAESVGKETVNS PYSPDMEKHFLFGKDKSLKEHNVGYRFKA
Sequences:
>Translated_349_residues MKRSLQRRLQEGTVIAGEGYLFELERRGYLQAGSFVPEVALENPDALKQTYRDFMNAGSDVVLAFTYNAHREKMRIIGKE QLLEPLNRSAIRLAKEVAKEHPQEEALVAGNISNTNIFDPNDESSKHKVREMFAEMAQWSKEEDVDFINGETFYYHEEAE IALEEILKKDLPAVITLGLMGENILRDCYTVEESCKILSEKGALVVGMNCFRGPDTMQPYIAKIRQHVDGYVGALPIPYR TSNEHPTFFNLPDGGCSCHLPTETTFPTALDPLYHNRYELAAWAKEAKEIGVNYIGLCCGASPAMLRAVAESVGKETVNS PYSPDMEKHFLFGKDKSLKEHNVGYRFKA >Mature_349_residues MKRSLQRRLQEGTVIAGEGYLFELERRGYLQAGSFVPEVALENPDALKQTYRDFMNAGSDVVLAFTYNAHREKMRIIGKE QLLEPLNRSAIRLAKEVAKEHPQEEALVAGNISNTNIFDPNDESSKHKVREMFAEMAQWSKEEDVDFINGETFYYHEEAE IALEEILKKDLPAVITLGLMGENILRDCYTVEESCKILSEKGALVVGMNCFRGPDTMQPYIAKIRQHVDGYVGALPIPYR TSNEHPTFFNLPDGGCSCHLPTETTFPTALDPLYHNRYELAAWAKEAKEIGVNYIGLCCGASPAMLRAVAESVGKETVNS PYSPDMEKHFLFGKDKSLKEHNVGYRFKA
Specific function: Terminal step in the de novo biosynthesis of methionine. [C]
COG id: COG0646
COG function: function code E; Methionine synthase I (cobalamin-dependent), methyltransferase domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Homo sapiens, GI13162290, Length=337, Percent_Identity=33.2344213649852, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI157266337, Length=348, Percent_Identity=30.1724137931034, Blast_Score=156, Evalue=2e-38, Organism=Homo sapiens, GI295821189, Length=192, Percent_Identity=31.25, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: 513 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1320 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003171 - InterPro: IPR003726 [H]
Pfam domain/function: PF02219 MTHFR; PF02574 S-methyl_trans [H]
EC number: =2.1.1.10; =1.5.1.20 [H]
Molecular weight: Translated: 39340; Mature: 39340
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSLQRRLQEGTVIAGEGYLFELERRGYLQAGSFVPEVALENPDALKQTYRDFMNAGSD CCHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCC VVLAFTYNAHREKMRIIGKEQLLEPLNRSAIRLAKEVAKEHPQEEALVAGNISNTNIFDP EEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC NDESSKHKVREMFAEMAQWSKEEDVDFINGETFYYHEEAEIALEEILKKDLPAVITLGLM CCCHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEECHHHHHHHHHHHHCCCCEEEHHHH GENILRDCYTVEESCKILSEKGALVVGMNCFRGPDTMQPYIAKIRQHVDGYVGALPIPYR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCC TSNEHPTFFNLPDGGCSCHLPTETTFPTALDPLYHNRYELAAWAKEAKEIGVNYIGLCCG CCCCCCCEEECCCCCCEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECC ASPAMLRAVAESVGKETVNSPYSPDMEKHFLFGKDKSLKEHNVGYRFKA CCHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCHHCCCCCEECC >Mature Secondary Structure MKRSLQRRLQEGTVIAGEGYLFELERRGYLQAGSFVPEVALENPDALKQTYRDFMNAGSD CCHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCC VVLAFTYNAHREKMRIIGKEQLLEPLNRSAIRLAKEVAKEHPQEEALVAGNISNTNIFDP EEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC NDESSKHKVREMFAEMAQWSKEEDVDFINGETFYYHEEAEIALEEILKKDLPAVITLGLM CCCHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEECHHHHHHHHHHHHCCCCEEEHHHH GENILRDCYTVEESCKILSEKGALVVGMNCFRGPDTMQPYIAKIRQHVDGYVGALPIPYR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCC TSNEHPTFFNLPDGGCSCHLPTETTFPTALDPLYHNRYELAAWAKEAKEIGVNYIGLCCG CCCCCCCEEECCCCCCEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECC ASPAMLRAVAESVGKETVNSPYSPDMEKHFLFGKDKSLKEHNVGYRFKA CCHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]