| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is livJ [C]
Identifier: 23098142
GI number: 23098142
Start: 722466
End: 723665
Strand: Direct
Name: livJ [C]
Synonym: OB0687
Alternate gene names: 23098142
Gene position: 722466-723665 (Clockwise)
Preceding gene: 23098141
Following gene: 23098143
Centisome position: 19.9
GC content: 37.92
Gene sequence:
>1200_bases ATGAGAAAAAACAAAATTTTCTTAAGTTTGATTTCCTTTTTGCTTATCGTGATTTTAACGGGATGTATTGACGGTAATAC ATCCAATAATAACAGTTCAGACTCTAGTACGAAGGCAGAGACAGAAGAAAAGGTTGTTAATATTGGATATACGGGTCCTT TAAGTGGTTCTGCTGCATTATATGGGGAAAATACTTTAAATGGTTTAGAAATGGCAGCAGAAGAAATTAATGAAGAGGGA TTTGAGGTTAATGGTGAAACATATAAATTAAATATTGTTTCTCTTGATGATAAATATTTACCAAATGAGTCAGCTTCTAA TGCCAAACGATTAGTGCAAGAAAACGCTACACCAATTATTTATACCCCACATAGTGGTGGTATTGCAGCGCTTCAAGTAT TTAATGAGCAAGAGAATTTTATTATTGGTGCATATTCTAGTGAACCTGCAATTACAGAACAGGGAAATGAATTAACCGTA AGAATTCCACCAAGTTATCACGGATATGTCGAACCTTTTACAACATATTCGATGGAGCGGTTTGGAAATAAATTAGCAGT GATTCCTCCAGTAACACAGTACGGTCAAGATTGGGCAGAGGAATTACTGCCTCATTGGGAGGAACAAGGGGGAGAGGTAG TTCACAAGGCATCAGTAGATTTTGCAAAAGAAACGGATTTTTATACTTTATTGACCAACGCTTTAGAATCAGATCCTGAT GTAATCTTCCTCGGAGGACCGTCAGAACCAACAGCGAATGTGGTTAATCAGGCGAGACAGCTTGGATTTGAAGGTGGATT TATTATTATGGACCAAGCCAAATTAGATGAGATGAAACGAATTACAGAGACGTATGACGTCTTGGAAGGTGCGATTGGAA CGATGCCATTAGTCGAAGCGGATTATCCTGGCGTACCAGCATTTGTAGAGAAATATACAGAAGAACATGGAATTGAACCG GGATCAGAAGCTGGTTTTCATTATGTGAGTTTGTATATTTTTGTTGAAGCAATGAAAGCAGCAGGAAATGTAGAGGATGC TACCGTAATCCGAGAGCATATACAGGATGGTTTAGATGCTTTGCCAGAAGATAAACAAGTATATGTCATCCCAAGTATAG ACGAGAATGGTGCATTCGAAATTGTTACGAGAGTCAGTGCAGTAGAAGATGGAGAAATAATAGGTATCCCAATCGATTAA
Upstream 100 bases:
>100_bases TAGTAGAAGGTCCAAAAGAAGAGTTGCTTTCAAATGAAGAAGTTAGAAAGGCTTATATTGGGGCTTAAAACTCAATATCT TAAAAATAGGAGGAATTTTA
Downstream 100 bases:
>100_bases CCTTTTCTAATCATTTTTAAAACAATAAAACTTGGCATTTTTCACTGCCAAGTTTTACTTCTTTTTTCCATAAGAAGCAA TGATTATGTACGGAACAGGA
Product: branched-chain amino acid ABC transporter amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRKNKIFLSLISFLLIVILTGCIDGNTSNNNSSDSSTKAETEEKVVNIGYTGPLSGSAALYGENTLNGLEMAAEEINEEG FEVNGETYKLNIVSLDDKYLPNESASNAKRLVQENATPIIYTPHSGGIAALQVFNEQENFIIGAYSSEPAITEQGNELTV RIPPSYHGYVEPFTTYSMERFGNKLAVIPPVTQYGQDWAEELLPHWEEQGGEVVHKASVDFAKETDFYTLLTNALESDPD VIFLGGPSEPTANVVNQARQLGFEGGFIIMDQAKLDEMKRITETYDVLEGAIGTMPLVEADYPGVPAFVEKYTEEHGIEP GSEAGFHYVSLYIFVEAMKAAGNVEDATVIREHIQDGLDALPEDKQVYVIPSIDENGAFEIVTRVSAVEDGEIIGIPID
Sequences:
>Translated_399_residues MRKNKIFLSLISFLLIVILTGCIDGNTSNNNSSDSSTKAETEEKVVNIGYTGPLSGSAALYGENTLNGLEMAAEEINEEG FEVNGETYKLNIVSLDDKYLPNESASNAKRLVQENATPIIYTPHSGGIAALQVFNEQENFIIGAYSSEPAITEQGNELTV RIPPSYHGYVEPFTTYSMERFGNKLAVIPPVTQYGQDWAEELLPHWEEQGGEVVHKASVDFAKETDFYTLLTNALESDPD VIFLGGPSEPTANVVNQARQLGFEGGFIIMDQAKLDEMKRITETYDVLEGAIGTMPLVEADYPGVPAFVEKYTEEHGIEP GSEAGFHYVSLYIFVEAMKAAGNVEDATVIREHIQDGLDALPEDKQVYVIPSIDENGAFEIVTRVSAVEDGEIIGIPID >Mature_399_residues MRKNKIFLSLISFLLIVILTGCIDGNTSNNNSSDSSTKAETEEKVVNIGYTGPLSGSAALYGENTLNGLEMAAEEINEEG FEVNGETYKLNIVSLDDKYLPNESASNAKRLVQENATPIIYTPHSGGIAALQVFNEQENFIIGAYSSEPAITEQGNELTV RIPPSYHGYVEPFTTYSMERFGNKLAVIPPVTQYGQDWAEELLPHWEEQGGEVVHKASVDFAKETDFYTLLTNALESDPD VIFLGGPSEPTANVVNQARQLGFEGGFIIMDQAKLDEMKRITETYDVLEGAIGTMPLVEADYPGVPAFVEKYTEEHGIEP GSEAGFHYVSLYIFVEAMKAAGNVEDATVIREHIQDGLDALPEDKQVYVIPSIDENGAFEIVTRVSAVEDGEIIGIPID
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=253, Percent_Identity=23.7154150197628, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43652; Mature: 43652
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNKIFLSLISFLLIVILTGCIDGNTSNNNSSDSSTKAETEEKVVNIGYTGPLSGSAAL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHEEEECCCCCCCCCEEE YGENTLNGLEMAAEEINEEGFEVNGETYKLNIVSLDDKYLPNESASNAKRLVQENATPII ECCCCCHHHHHHHHHHCCCCCEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE YTPHSGGIAALQVFNEQENFIIGAYSSEPAITEQGNELTVRIPPSYHGYVEPFTTYSMER ECCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH FGNKLAVIPPVTQYGQDWAEELLPHWEEQGGEVVHKASVDFAKETDFYTLLTNALESDPD HCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCHHHHHHHHHCCCCC VIFLGGPSEPTANVVNQARQLGFEGGFIIMDQAKLDEMKRITETYDVLEGAIGTMPLVEA EEEECCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEC DYPGVPAFVEKYTEEHGIEPGSEAGFHYVSLYIFVEAMKAAGNVEDATVIREHIQDGLDA CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LPEDKQVYVIPSIDENGAFEIVTRVSAVEDGEIIGIPID CCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCEEEEECC >Mature Secondary Structure MRKNKIFLSLISFLLIVILTGCIDGNTSNNNSSDSSTKAETEEKVVNIGYTGPLSGSAAL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHEEEECCCCCCCCCEEE YGENTLNGLEMAAEEINEEGFEVNGETYKLNIVSLDDKYLPNESASNAKRLVQENATPII ECCCCCHHHHHHHHHHCCCCCEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE YTPHSGGIAALQVFNEQENFIIGAYSSEPAITEQGNELTVRIPPSYHGYVEPFTTYSMER ECCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH FGNKLAVIPPVTQYGQDWAEELLPHWEEQGGEVVHKASVDFAKETDFYTLLTNALESDPD HCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCHHHHHHHHHCCCCC VIFLGGPSEPTANVVNQARQLGFEGGFIIMDQAKLDEMKRITETYDVLEGAIGTMPLVEA EEEECCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEC DYPGVPAFVEKYTEEHGIEPGSEAGFHYVSLYIFVEAMKAAGNVEDATVIREHIQDGLDA CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LPEDKQVYVIPSIDENGAFEIVTRVSAVEDGEIIGIPID CCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA