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The map label for this gene is rex

Identifier: 23098107

GI number: 23098107

Start: 687979

End: 688608

Strand: Direct

Name: rex

Synonym: OB0652

Alternate gene names: 23098107

Gene position: 687979-688608 (Clockwise)

Preceding gene: 23098104

Following gene: 23098110

Centisome position: 18.95

GC content: 34.29

Gene sequence:

>630_bases
ATGGAACAAAACAAGATTCCGCAAGCAACTGCAAAACGCTTGCCATTATATTATCGTTTCATTAACAACTTAAATCAACA
AGGTAAAAAGCGTGTATCATCAAAAGAATTAAGTGAAGCGGTTAAAGTAGATTCCGCAACCATTCGTAGAGATTTCTCTT
ACTTCGGTGCACTAGGTAAAAAAGGATATGGATACAATGTTGAATATTTACTAGGTTTTTTTAAGAGTACATTAGACCAA
CATGAAATAACAGAAGTAGCGTTAATTGGTGTTGGAAATTTAGGAACAGCTTTCTTACATTATAATTTTATGAAAAATAA
TAATATCCGTATTACCATTGCATTTGATGCTGATGAAAATAAGGTAGGCACCGATATCGGAGGAGTTCCAGTCTATCATA
TTGATGAACTAGGGGAAAGGTTAAAGAATACAGAGGTTGCTATTCTGACGATACCTGCTGATGAAGCAGATGCAATTGCT
AATCAACTTGTTGAGCATGGCGTTAGTGGAATATTAAACTTTACCCCAGCAAGAATTACAGTACCTAGTCATATTCGTGT
GCATCATATTGATTTAGCGATTGAGCTTCAATCACTCGTGTATTTTCTTAAACATTATTCTTTAAACTAA

Upstream 100 bases:

>100_bases
GACAATATTATTGTGAAAAATGTCACGACTTCTAAGGAATAATCTGTTAAAATAAATATAGTATGATAATTATTCTAAGC
ATTGAAAAGAGGAAGGTCGT

Downstream 100 bases:

>100_bases
TTATTTCATTATTTTAAATCAATTATTATGTAAGCGTTTATCCTTATATTAATGAGAAAAGTAGACTGTGAATACAGTCT
ACTTTTTCTTTCTTAATTTA

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEQNKIPQATAKRLPLYYRFINNLNQQGKKRVSSKELSEAVKVDSATIRRDFSYFGALGKKGYGYNVEYLLGFFKSTLDQ
HEITEVALIGVGNLGTAFLHYNFMKNNNIRITIAFDADENKVGTDIGGVPVYHIDELGERLKNTEVAILTIPADEADAIA
NQLVEHGVSGILNFTPARITVPSHIRVHHIDLAIELQSLVYFLKHYSLN

Sequences:

>Translated_209_residues
MEQNKIPQATAKRLPLYYRFINNLNQQGKKRVSSKELSEAVKVDSATIRRDFSYFGALGKKGYGYNVEYLLGFFKSTLDQ
HEITEVALIGVGNLGTAFLHYNFMKNNNIRITIAFDADENKVGTDIGGVPVYHIDELGERLKNTEVAILTIPADEADAIA
NQLVEHGVSGILNFTPARITVPSHIRVHHIDLAIELQSLVYFLKHYSLN
>Mature_209_residues
MEQNKIPQATAKRLPLYYRFINNLNQQGKKRVSSKELSEAVKVDSATIRRDFSYFGALGKKGYGYNVEYLLGFFKSTLDQ
HEITEVALIGVGNLGTAFLHYNFMKNNNIRITIAFDADENKVGTDIGGVPVYHIDELGERLKNTEVAILTIPADEADAIA
NQLVEHGVSGILNFTPARITVPSHIRVHHIDLAIELQSLVYFLKHYSLN

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_OCEIH (Q8ESI2)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_691573.1
- ProteinModelPortal:   Q8ESI2
- SMR:   Q8ESI2
- GeneID:   1016057
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0652
- NMPDR:   fig|221109.1.peg.658
- HOGENOM:   HBG482264
- OMA:   TRGVGYD
- ProtClustDB:   PRK05472
- BioCyc:   OIHE221109:OB0652-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 23450; Mature: 23450

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNKIPQATAKRLPLYYRFINNLNQQGKKRVSSKELSEAVKVDSATIRRDFSYFGALGK
CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
KGYGYNVEYLLGFFKSTLDQHEITEVALIGVGNLGTAFLHYNFMKNNNIRITIAFDADEN
CCCCCCHHHHHHHHHHHCCHHHHHEEEEEECCCCCEEEEEEEEEECCCEEEEEEECCCCC
KVGTDIGGVPVYHIDELGERLKNTEVAILTIPADEADAIANQLVEHGVSGILNFTPARIT
CCCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEE
VPSHIRVHHIDLAIELQSLVYFLKHYSLN
CCCCEEEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQNKIPQATAKRLPLYYRFINNLNQQGKKRVSSKELSEAVKVDSATIRRDFSYFGALGK
CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
KGYGYNVEYLLGFFKSTLDQHEITEVALIGVGNLGTAFLHYNFMKNNNIRITIAFDADEN
CCCCCCHHHHHHHHHHHCCHHHHHEEEEEECCCCCEEEEEEEEEECCCEEEEEEECCCCC
KVGTDIGGVPVYHIDELGERLKNTEVAILTIPADEADAIANQLVEHGVSGILNFTPARIT
CCCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEE
VPSHIRVHHIDLAIELQSLVYFLKHYSLN
CCCCEEEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376