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The map label for this gene is yfeT [C]

Identifier: 23098068

GI number: 23098068

Start: 641553

End: 642401

Strand: Direct

Name: yfeT [C]

Synonym: OB0613

Alternate gene names: 23098068

Gene position: 641553-642401 (Clockwise)

Preceding gene: 23098067

Following gene: 23098069

Centisome position: 17.67

GC content: 34.51

Gene sequence:

>849_bases
ATGGGATCTATATTGAAAGGAATTCAGCAAAAAATTAATTATTTATCAGAAGCAGAAAGAAAAATAGGAAATTTTATTTT
ACAATATCCTGATCTAGTTCCGAACATGACCACAAAGGATATGTCTAAAAAAACTGGCAGTAGTGAAGCTACCGTTGTAC
GATTTTGTAAATCTGTCGGAATCGAAAGTTTTAAAACATTAAAGCTAGAACTAGTTCGAGAACTTTCCCAAGCCGATAGA
CAATTAACTGATTTTTCGATTTTAGAAACAAAGGGAGAGCCTTTTGATTTTTTTCAACAAGTGGTTCATGTTAATAAAAT
GGCGATTGAATCTATGCTCTCGTCAATTGATCGAAAGGCACTAGATAAAGCGGTTAATCTATTGCAACAGGCGAATCAGA
TATTATTTTTTGGTGTTGGTGGTTCTTCTACAGCAGCATATGATGGATATTATAAATTTACCAGATTAGGATACGCATGT
ACTGCTCCGCAGGATTTTCATTTGATGCTTTCCACAATTCCTTACTTGAAAAAAACAGACGTTCTTATTGCAATAAGTAT
GTCTGGAAAAACTAAGGATGTAGTTGATCTTGCTGAAGTAGCGAAGCGTAGTGGAGTTACTGTCATTGCAATTACGAATC
TAGATAAATCCCCTTTATATAAAGTAGCAGATATTCATTTATGTACACCAACCGTCGAGCATGATTTTAGGATTGGGAGT
ATTCCTTCACGAATGACACAACTTACAGTAATCGACGCACTTTATTTGAGTATTTTTCACTCTAAAGGAGATCAAGTTTT
ATCGAAATATCAAGATGCTAGAAAAGAAGTTGAACGATTAAGGCGTTAG

Upstream 100 bases:

>100_bases
CGAGAACAATGCTGTTTTTTACTTGTTAAACTATTGTTCCGTTTAGGAAAACCGGTATAATTAACCTTAGTAAATAACTA
AAAGTTTGAGAGGTACTATA

Downstream 100 bases:

>100_bases
GAGAGAAAGACAACAGTTAATGAAATTAAATTTCATAATTTACTAAAATATTATTGACTAATAGTTTCGCTATTGTAAAA
TAAAATTAAGAATATTAGGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGSILKGIQQKINYLSEAERKIGNFILQYPDLVPNMTTKDMSKKTGSSEATVVRFCKSVGIESFKTLKLELVRELSQADR
QLTDFSILETKGEPFDFFQQVVHVNKMAIESMLSSIDRKALDKAVNLLQQANQILFFGVGGSSTAAYDGYYKFTRLGYAC
TAPQDFHLMLSTIPYLKKTDVLIAISMSGKTKDVVDLAEVAKRSGVTVIAITNLDKSPLYKVADIHLCTPTVEHDFRIGS
IPSRMTQLTVIDALYLSIFHSKGDQVLSKYQDARKEVERLRR

Sequences:

>Translated_282_residues
MGSILKGIQQKINYLSEAERKIGNFILQYPDLVPNMTTKDMSKKTGSSEATVVRFCKSVGIESFKTLKLELVRELSQADR
QLTDFSILETKGEPFDFFQQVVHVNKMAIESMLSSIDRKALDKAVNLLQQANQILFFGVGGSSTAAYDGYYKFTRLGYAC
TAPQDFHLMLSTIPYLKKTDVLIAISMSGKTKDVVDLAEVAKRSGVTVIAITNLDKSPLYKVADIHLCTPTVEHDFRIGS
IPSRMTQLTVIDALYLSIFHSKGDQVLSKYQDARKEVERLRR
>Mature_281_residues
GSILKGIQQKINYLSEAERKIGNFILQYPDLVPNMTTKDMSKKTGSSEATVVRFCKSVGIESFKTLKLELVRELSQADRQ
LTDFSILETKGEPFDFFQQVVHVNKMAIESMLSSIDRKALDKAVNLLQQANQILFFGVGGSSTAAYDGYYKFTRLGYACT
APQDFHLMLSTIPYLKKTDVLIAISMSGKTKDVVDLAEVAKRSGVTVIAITNLDKSPLYKVADIHLCTPTVEHDFRIGSI
PSRMTQLTVIDALYLSIFHSKGDQVLSKYQDARKEVERLRR

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=272, Percent_Identity=30.1470588235294, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788159, Length=282, Percent_Identity=31.2056737588652, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87082369, Length=244, Percent_Identity=30.327868852459, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI87082130, Length=283, Percent_Identity=24.7349823321555, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31607; Mature: 31476

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSILKGIQQKINYLSEAERKIGNFILQYPDLVPNMTTKDMSKKTGSSEATVVRFCKSVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHC
IESFKTLKLELVRELSQADRQLTDFSILETKGEPFDFFQQVVHVNKMAIESMLSSIDRKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDKAVNLLQQANQILFFGVGGSSTAAYDGYYKFTRLGYACTAPQDFHLMLSTIPYLKKTD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCEEECCCCHHHHHHHHCCCCCCCC
VLIAISMSGKTKDVVDLAEVAKRSGVTVIAITNLDKSPLYKVADIHLCTPTVEHDFRIGS
EEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHEEEEECCCCCCCCEECC
IPSRMTQLTVIDALYLSIFHSKGDQVLSKYQDARKEVERLRR
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSILKGIQQKINYLSEAERKIGNFILQYPDLVPNMTTKDMSKKTGSSEATVVRFCKSVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHC
IESFKTLKLELVRELSQADRQLTDFSILETKGEPFDFFQQVVHVNKMAIESMLSSIDRKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDKAVNLLQQANQILFFGVGGSSTAAYDGYYKFTRLGYACTAPQDFHLMLSTIPYLKKTD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCEEECCCCHHHHHHHHCCCCCCCC
VLIAISMSGKTKDVVDLAEVAKRSGVTVIAITNLDKSPLYKVADIHLCTPTVEHDFRIGS
EEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHEEEEECCCCCCCCEECC
IPSRMTQLTVIDALYLSIFHSKGDQVLSKYQDARKEVERLRR
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]