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The map label for this gene is ycdQ [C]

Identifier: 23098033

GI number: 23098033

Start: 604666

End: 605931

Strand: Reverse

Name: ycdQ [C]

Synonym: OB0578

Alternate gene names: 23098033

Gene position: 605931-604666 (Counterclockwise)

Preceding gene: 23098036

Following gene: 28563909

Centisome position: 16.69

GC content: 30.41

Gene sequence:

>1266_bases
TTGAACACTCTTCTCGTTTGTATTATTAATAGCATAAATAAACAAACACTTCTAAATACATTGCAATCCCTAAAACCCCT
ACACTCACAAATTTTAGAAATTCGATGTATTAGTTTAAAAAGTAACAATTTGACGAAAGATATTAACCATCCGTTATTAG
AGCAAATCTCTCCTATAGATAACGATTTAGGTTTAACGCTTAATTATGTAATTGAAGAATCAAAAGCAACAACAGTATTA
TTTTTATACAATACAGATTATTTACAGAGCGATTTCCCGATAACAAAAGACACAATACATCATATCGAAAAAGAATACAG
AAATGTTACGATTAATTATCCTGCCTTTGTTCCCGTATCAACATTAATAAAATATCCATTTCACTCAAGTAAGCACCTTG
TATTTCAAGAAGCAGTCTTCCCATTATGGTTAAGTAAAGAAAATTTCAATTCATCGAAGGTTTTAAATATCAAACCAACA
AAAATTAACAATTTTAGATCTGAAATAGAAAAACAAAAGGTAATTCATTCCTATAGTCATAAACTTAACCCAAAAAAAGC
TCCTTCAATCGCTGTCTTAATTTGTGCTTATAATGAAGAATCTTATATTGACGCTGCAATTCAATCTGCATACTTACAAA
ATGAACCAGCAGATGAAATTCTTATTATGGATGACGGATCAACGGATCACACAGCTTCCCGTATTAATCAATGGAACAAG
TATCAACGTATACGTACCTACTTTCAAAAGAATCAAGGTAAAGCGAACGCATTAAACAAATTACTCTCATTTGTTACTAG
CGATTTTATTTTAGAATTAGATGCGGATGATTGGCTAGACTACAACGCTATATCAACCATTAAAAATTATCTAAGCCATT
TAGGAAAAAAGGATGTTCTTCTTTATGGTAATTTTAGAAAATGGAAGCAACTCCCTAATGATGAAGTCATATATACAACG
CACGCAAAAGGAAAACAAATTTATCATAAACATCAATTATTTAAATACTCCTTACCTCTAGGTCCAAGAATTTATCGTAC
ATCCAGTTTAAATGCAATTCATGGATTCCCAACAATTCCTTTTGAAGAGGGTAGACTATATGAAGATGTGACAGTACTCC
ATTCCTTATTTGATCTAGGAAATTTTTGTTATCATGATTTTACTATTTACAATGTAAGAGAACATGATCAAAGTATCACC
AAAAATAACCATTTCAAATGGAGAGACTATGTTAAGTTTATGGAACAAAATTTCAAGACAGATTAA

Upstream 100 bases:

>100_bases
CCATTAAAAACTACTAAAGATTTAATGAAAAATTACCATTAATTAAGCATGATTTTCTAAGTCAGCACATAAATTTTAAT
TTTGAATGGAGGAATATAAA

Downstream 100 bases:

>100_bases
ACTTTGTGCATAAGAGATGTGAAATAATAATTAGGTAAGATAATGCTTCATAAAAATACCTAAATTAGAAAACGAATAAT
CTACTGATAGGATGGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glucosaminyltransferase; N-Glycosyltransferase; Glycosyltransferase WchA; Cell Wall Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MNTLLVCIINSINKQTLLNTLQSLKPLHSQILEIRCISLKSNNLTKDINHPLLEQISPIDNDLGLTLNYVIEESKATTVL
FLYNTDYLQSDFPITKDTIHHIEKEYRNVTINYPAFVPVSTLIKYPFHSSKHLVFQEAVFPLWLSKENFNSSKVLNIKPT
KINNFRSEIEKQKVIHSYSHKLNPKKAPSIAVLICAYNEESYIDAAIQSAYLQNEPADEILIMDDGSTDHTASRINQWNK
YQRIRTYFQKNQGKANALNKLLSFVTSDFILELDADDWLDYNAISTIKNYLSHLGKKDVLLYGNFRKWKQLPNDEVIYTT
HAKGKQIYHKHQLFKYSLPLGPRIYRTSSLNAIHGFPTIPFEEGRLYEDVTVLHSLFDLGNFCYHDFTIYNVREHDQSIT
KNNHFKWRDYVKFMEQNFKTD

Sequences:

>Translated_421_residues
MNTLLVCIINSINKQTLLNTLQSLKPLHSQILEIRCISLKSNNLTKDINHPLLEQISPIDNDLGLTLNYVIEESKATTVL
FLYNTDYLQSDFPITKDTIHHIEKEYRNVTINYPAFVPVSTLIKYPFHSSKHLVFQEAVFPLWLSKENFNSSKVLNIKPT
KINNFRSEIEKQKVIHSYSHKLNPKKAPSIAVLICAYNEESYIDAAIQSAYLQNEPADEILIMDDGSTDHTASRINQWNK
YQRIRTYFQKNQGKANALNKLLSFVTSDFILELDADDWLDYNAISTIKNYLSHLGKKDVLLYGNFRKWKQLPNDEVIYTT
HAKGKQIYHKHQLFKYSLPLGPRIYRTSSLNAIHGFPTIPFEEGRLYEDVTVLHSLFDLGNFCYHDFTIYNVREHDQSIT
KNNHFKWRDYVKFMEQNFKTD
>Mature_421_residues
MNTLLVCIINSINKQTLLNTLQSLKPLHSQILEIRCISLKSNNLTKDINHPLLEQISPIDNDLGLTLNYVIEESKATTVL
FLYNTDYLQSDFPITKDTIHHIEKEYRNVTINYPAFVPVSTLIKYPFHSSKHLVFQEAVFPLWLSKENFNSSKVLNIKPT
KINNFRSEIEKQKVIHSYSHKLNPKKAPSIAVLICAYNEESYIDAAIQSAYLQNEPADEILIMDDGSTDHTASRINQWNK
YQRIRTYFQKNQGKANALNKLLSFVTSDFILELDADDWLDYNAISTIKNYLSHLGKKDVLLYGNFRKWKQLPNDEVIYTT
HAKGKQIYHKHQLFKYSLPLGPRIYRTSSLNAIHGFPTIPFEEGRLYEDVTVLHSLFDLGNFCYHDFTIYNVREHDQSIT
KNNHFKWRDYVKFMEQNFKTD

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49136; Mature: 49136

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLVCIINSINKQTLLNTLQSLKPLHSQILEIRCISLKSNNLTKDINHPLLEQISPID
CCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHCCCCC
NDLGLTLNYVIEESKATTVLFLYNTDYLQSDFPITKDTIHHIEKEYRNVTINYPAFVPVS
CCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCHH
TLIKYPFHSSKHLVFQEAVFPLWLSKENFNSSKVLNIKPTKINNFRSEIEKQKVIHSYSH
HHHHCCCCCCCCEEHHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
KLNPKKAPSIAVLICAYNEESYIDAAIQSAYLQNEPADEILIMDDGSTDHTASRINQWNK
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
YQRIRTYFQKNQGKANALNKLLSFVTSDFILELDADDWLDYNAISTIKNYLSHLGKKDVL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCEE
LYGNFRKWKQLPNDEVIYTTHAKGKQIYHKHQLFKYSLPLGPRIYRTSSLNAIHGFPTIP
EECCCHHHHHCCCCCEEEEECCCCHHHHHHHHHEEECCCCCCEEEECCCCCCCCCCCCCC
FEEGRLYEDVTVLHSLFDLGNFCYHDFTIYNVREHDQSITKNNHFKWRDYVKFMEQNFKT
CCCCCHHHHHHHHHHHHHHHHHHEECEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCC
D
C
>Mature Secondary Structure
MNTLLVCIINSINKQTLLNTLQSLKPLHSQILEIRCISLKSNNLTKDINHPLLEQISPID
CCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHCCCCC
NDLGLTLNYVIEESKATTVLFLYNTDYLQSDFPITKDTIHHIEKEYRNVTINYPAFVPVS
CCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCHH
TLIKYPFHSSKHLVFQEAVFPLWLSKENFNSSKVLNIKPTKINNFRSEIEKQKVIHSYSH
HHHHCCCCCCCCEEHHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
KLNPKKAPSIAVLICAYNEESYIDAAIQSAYLQNEPADEILIMDDGSTDHTASRINQWNK
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
YQRIRTYFQKNQGKANALNKLLSFVTSDFILELDADDWLDYNAISTIKNYLSHLGKKDVL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCEE
LYGNFRKWKQLPNDEVIYTTHAKGKQIYHKHQLFKYSLPLGPRIYRTSSLNAIHGFPTIP
EECCCHHHHHCCCCCEEEEECCCCHHHHHHHHHEEECCCCCCEEEECCCCCCCCCCCCCC
FEEGRLYEDVTVLHSLFDLGNFCYHDFTIYNVREHDQSITKNNHFKWRDYVKFMEQNFKT
CCCCCHHHHHHHHHHHHHHHHHHEECEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA