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The map label for this gene is yecS [C]

Identifier: 23098014

GI number: 23098014

Start: 590208

End: 590921

Strand: Reverse

Name: yecS [C]

Synonym: OB0559

Alternate gene names: 23098014

Gene position: 590921-590208 (Counterclockwise)

Preceding gene: 23098015

Following gene: 23098013

Centisome position: 16.28

GC content: 34.45

Gene sequence:

>714_bases
GTGCCCTATTTTTTTGGAACGAAGTCTACTTATGATAAAGGAGTGATTACAATTTCTACTTTAATGGATATATCTGAAAA
GTTGCTTCAAGGGATTGGAGTAACGTTTACGATATTATTAGCTTCTGCTCTTTTTTCTTATCTTATGGCATTTATAGCTG
GGCTGTGCCGTCTATCTGATAATGTTATTATTCGGAAAGGAACAGGATTTTATGTTGAAGTCTTTCGAGGAACATCTTTA
ATTGTTCAATTATTTTGGTTTTACTATGCTCTACCAATGTTATTTGGGTTTAATTCATTAGATAATTGGTGGATTGGTGT
AATCGCTATTGGATTAAATTATGGTGCGTATTTATCAGAAGTTGTTAGGAGTTCTATCTTAGCAGTTTCTAAAGGACAAA
GCGAAGCTGCTACTGCATTAAACATGTCTCGATTCCAACGAATGCGTCTGGTTATCTTTCCTCAAGCTGTTCGAATGATG
TTACCAGAGTTCGGAAATTATACAATCCAAATACTTAAAGGAACTTCTCTTGTTTCATTAATTGGACTTCAAGACATATT
GTACCATGGAGAATCTCTCCGAAATGTAAGTAGTATGGAAATGGGAGGACTTATCTACTTTGTAGCACTCATATTCTACT
TTGTTTTAGCATTACCATTGATTTTCTTTACCAGAAAGGCAGAAAAAATTGCAAAGAAAGGGGTTGCTAACTAA

Upstream 100 bases:

>100_bases
TTCAGTAACTACCGAGCAACTCTGTAATGGGGAAGTATAACACTAGAAATGTGAGTTGAATTACAGACTCCATAGGGTCC
GTTTCCTTGCCTGAGGGAGC

Downstream 100 bases:

>100_bases
TGAATTATTGGAGTTGGGAAACATTCATGGATGCTTTGCCATTTGTATTACAAGGATTAGGAATTACTGTTGGTTTAACT
ATTTCTTGTTTCCTCTTTGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MPYFFGTKSTYDKGVITISTLMDISEKLLQGIGVTFTILLASALFSYLMAFIAGLCRLSDNVIIRKGTGFYVEVFRGTSL
IVQLFWFYYALPMLFGFNSLDNWWIGVIAIGLNYGAYLSEVVRSSILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMM
LPEFGNYTIQILKGTSLVSLIGLQDILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPLIFFTRKAEKIAKKGVAN

Sequences:

>Translated_237_residues
MPYFFGTKSTYDKGVITISTLMDISEKLLQGIGVTFTILLASALFSYLMAFIAGLCRLSDNVIIRKGTGFYVEVFRGTSL
IVQLFWFYYALPMLFGFNSLDNWWIGVIAIGLNYGAYLSEVVRSSILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMM
LPEFGNYTIQILKGTSLVSLIGLQDILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPLIFFTRKAEKIAKKGVAN
>Mature_236_residues
PYFFGTKSTYDKGVITISTLMDISEKLLQGIGVTFTILLASALFSYLMAFIAGLCRLSDNVIIRKGTGFYVEVFRGTSLI
VQLFWFYYALPMLFGFNSLDNWWIGVIAIGLNYGAYLSEVVRSSILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMML
PEFGNYTIQILKGTSLVSLIGLQDILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPLIFFTRKAEKIAKKGVAN

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=36.81592039801, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1786873, Length=192, Percent_Identity=31.7708333333333, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=33.1818181818182, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=30.2884615384615, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=29.9019607843137, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1787086, Length=196, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786874, Length=180, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787087, Length=113, Percent_Identity=36.283185840708, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014342 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26531; Mature: 26400

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYFFGTKSTYDKGVITISTLMDISEKLLQGIGVTFTILLASALFSYLMAFIAGLCRLSD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
NVIIRKGTGFYVEVFRGTSLIVQLFWFYYALPMLFGFNSLDNWWIGVIAIGLNYGAYLSE
CEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
VVRSSILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMMLPEFGNYTIQILKGTSLVSL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHH
IGLQDILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPLIFFTRKAEKIAKKGVAN
HHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PYFFGTKSTYDKGVITISTLMDISEKLLQGIGVTFTILLASALFSYLMAFIAGLCRLSD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
NVIIRKGTGFYVEVFRGTSLIVQLFWFYYALPMLFGFNSLDNWWIGVIAIGLNYGAYLSE
CEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
VVRSSILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMMLPEFGNYTIQILKGTSLVSL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHH
IGLQDILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPLIFFTRKAEKIAKKGVAN
HHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]