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The map label for this gene is yecS [C]

Identifier: 23098013

GI number: 23098013

Start: 589504

End: 590208

Strand: Reverse

Name: yecS [C]

Synonym: OB0558

Alternate gene names: 23098013

Gene position: 590208-589504 (Counterclockwise)

Preceding gene: 23098014

Following gene: 23098012

Centisome position: 16.26

GC content: 34.33

Gene sequence:

>705_bases
ATGAATTATTGGAGTTGGGAAACATTCATGGATGCTTTGCCATTTGTATTACAAGGATTAGGAATTACTGTTGGTTTAAC
TATTTCTTGTTTCCTCTTTGCAATGATTTTTGGGTTCTTTTGGACATTTGCTCGACGAGTAAAAAACCGACCTTTTAATT
TTATCGTTACTTGGACAATGGAGTTTATACGTTCTACTCCTCCGCTTGTTCAATTATTCTTTATTTACTTTGCGTTCCCT
AGTGTTCCTGTTATTGGCATGACACTACATCCGTTTGTATGTGCAGTGTTAGGTTTAGGTATTCACTTTAGTACTTATAT
AGGTGAAATCTATCGATCCGGAATTGAAAGTGTTGAGAAAGGACAATGGGAAGCATCCACCTCTTTAAACTTTTCTACCT
TGGATAAATGGCGGAAAATTATTTTACCTCAAGCGATTCCACCAACGATTCCAATGTTAGGTAATTATTTTATTATCATG
TTTAAAGAAGTTCCTATTACATCAACGATTAGTGTAGGTGGTATTATGTTAATGGCAAGAACTTACGGAGCGCAAAATTG
GTCTTACTTGGAGCCAATTACAATAGTAGGTATTATTTTCTTACTATTAAGCTATCCGTCAGCAGTGCTTATTAAAAAAT
TGGAATTAAAATACAACCGCAATTTCGACAAAAACCAAATTAAGAAAAAAGGAGCCTTAACATAA

Upstream 100 bases:

>100_bases
TCTACTTTGTAGCACTCATATTCTACTTTGTTTTAGCATTACCATTGATTTTCTTTACCAGAAAGGCAGAAAAAATTGCA
AAGAAAGGGGTTGCTAACTA

Downstream 100 bases:

>100_bases
TGACAGAACCGATAGTAAAATTTCAAGATATCCATAAGTCCTTTGGTGATGTAAAGGTATTAAAGGGAATTAATTTAGAT
ATTCATCCAGCTGAAAAAGT

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNYWSWETFMDALPFVLQGLGITVGLTISCFLFAMIFGFFWTFARRVKNRPFNFIVTWTMEFIRSTPPLVQLFFIYFAFP
SVPVIGMTLHPFVCAVLGLGIHFSTYIGEIYRSGIESVEKGQWEASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIM
FKEVPITSTISVGGIMLMARTYGAQNWSYLEPITIVGIIFLLLSYPSAVLIKKLELKYNRNFDKNQIKKKGALT

Sequences:

>Translated_234_residues
MNYWSWETFMDALPFVLQGLGITVGLTISCFLFAMIFGFFWTFARRVKNRPFNFIVTWTMEFIRSTPPLVQLFFIYFAFP
SVPVIGMTLHPFVCAVLGLGIHFSTYIGEIYRSGIESVEKGQWEASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIM
FKEVPITSTISVGGIMLMARTYGAQNWSYLEPITIVGIIFLLLSYPSAVLIKKLELKYNRNFDKNQIKKKGALT
>Mature_234_residues
MNYWSWETFMDALPFVLQGLGITVGLTISCFLFAMIFGFFWTFARRVKNRPFNFIVTWTMEFIRSTPPLVQLFFIYFAFP
SVPVIGMTLHPFVCAVLGLGIHFSTYIGEIYRSGIESVEKGQWEASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIM
FKEVPITSTISVGGIMLMARTYGAQNWSYLEPITIVGIIFLLLSYPSAVLIKKLELKYNRNFDKNQIKKKGALT

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=29.4930875576037, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=29.1079812206573, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=24.1071428571429, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=23.8738738738739, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1788645, Length=228, Percent_Identity=27.1929824561404, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=23.1818181818182, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=25.1141552511416, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=26.2672811059908, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082239, Length=154, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014341 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26792; Mature: 26792

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYWSWETFMDALPFVLQGLGITVGLTISCFLFAMIFGFFWTFARRVKNRPFNFIVTWTM
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
EFIRSTPPLVQLFFIYFAFPSVPVIGMTLHPFVCAVLGLGIHFSTYIGEIYRSGIESVEK
HHHHCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQWEASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIMFKEVPITSTISVGGIMLMAR
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHH
TYGAQNWSYLEPITIVGIIFLLLSYPSAVLIKKLELKYNRNFDKNQIKKKGALT
HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MNYWSWETFMDALPFVLQGLGITVGLTISCFLFAMIFGFFWTFARRVKNRPFNFIVTWTM
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
EFIRSTPPLVQLFFIYFAFPSVPVIGMTLHPFVCAVLGLGIHFSTYIGEIYRSGIESVEK
HHHHCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQWEASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIMFKEVPITSTISVGGIMLMAR
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHH
TYGAQNWSYLEPITIVGIIFLLLSYPSAVLIKKLELKYNRNFDKNQIKKKGALT
HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]