| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is 23097681
Identifier: 23097681
GI number: 23097681
Start: 247709
End: 248683
Strand: Direct
Name: 23097681
Synonym: OB0226
Alternate gene names: NA
Gene position: 247709-248683 (Clockwise)
Preceding gene: 23097680
Following gene: 23097682
Centisome position: 6.82
GC content: 40.21
Gene sequence:
>975_bases ATGAAAGCAACAGCAAAGGCGCATACAAATATCGCATTGATAAAATATTGGGGAAAGCGAAATGAACCAATTATATTACC AACAAATAGTAACCTATCTCTTACGTTAGATGGGTTTTCTACTGTAACGACCGTCCATTTTCAAGAAGAATTAAGTTCCG ATGAGTTTTTCTTGAATGATAGGCTTGTAGAAGACGCAGCAAGCCAACGTGTAACAGGATTCTTAGATAAGGTCAGAGCA ATGGCGGGTAAAGAAATGTATGCTCGAATTCATTCTTTAAACCATGTTCCGACTGCGGCAGGATTTGCATCCTCAGCTTC AGGTTTTGCTGCATTAGCTGCAGCTAGCACAAAAGCCATAGGGTTAGAATTAAATGATACGGAATTATCTATATTAACAA GACAAGGTTCCGGCTCAGCGTGTCGCTCTATCTATGGTGGCTTTGTCGAATGGCAGATGGGTGAAAAAGAAGACGGTTCT GATTCTTATGCAGTACCTATTGCTTCAAAGGATCATTGGGACATCCGTGTAGCTGCTGTAGTCCTTTCTGCTACGGAGAA GAAAGTATCAAGTCGAGATGGAATGAGAAGAACTGTGGAAACATCTCCTTTCTATGATGGCTGGTTAAAACAAACACCGA AGGATTTAGAGGAAATAAAGACGGCAATTCATGATAAAGACTTTGAAAAGACAGGAAGTATTGCGGAAGCGAATTGTATG AGAATGCATGCAACAACATTAGGCGCAAATCCTCCTTTTACGTATTGGCAAGACACAACGATGCGTGTCATGCAAAATGT ACAACAGATGAGAGAAGAAGGAATTCCTGCTTACTTTACCATTGATGCTGGCCCAAATGTTAAAGTGTTATATTTACCAA AAGATGAGTCGAAAGTGAAGCAAAGACTTGAACAGATTATGGGTGTCGAGGATGTAATCGTTAGTAAGCCAGGAAAAGGA ATAAGCTATTTGTAG
Upstream 100 bases:
>100_bases TTAGCTGATAAACTTCGTAAATTCGGTGCTAATTCAGTTTGGCCATTTGTATTGAAGAAGCAAAGTAAGTCTTAAACGAG AAGATTGAAGGAGTAATTCA
Downstream 100 bases:
>100_bases GGGTTGGAAAAGTTGAGTAAGAGACAATTGACCGTTAAAGTGCCAGGCAAACTAATGATTGCTGGAGAGTTCGCTGTATT AGAACCTTATCAAAAACTTG
Product: mevalonate diphosphate decarboxylase
Products: ADP; phosphate; isopentenyl diphosphate; CO2
Alternate protein names: Mevalonate Diphosphate Decarboxylase; Mevalonate Pyrophosphate Decarboxylase; GHMP Kinase; GHMP Kinase Domain-Containing Protein; Phosphomevalonate Kinase; Ghmp Kinase
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKATAKAHTNIALIKYWGKRNEPIILPTNSNLSLTLDGFSTVTTVHFQEELSSDEFFLNDRLVEDAASQRVTGFLDKVRA MAGKEMYARIHSLNHVPTAAGFASSASGFAALAAASTKAIGLELNDTELSILTRQGSGSACRSIYGGFVEWQMGEKEDGS DSYAVPIASKDHWDIRVAAVVLSATEKKVSSRDGMRRTVETSPFYDGWLKQTPKDLEEIKTAIHDKDFEKTGSIAEANCM RMHATTLGANPPFTYWQDTTMRVMQNVQQMREEGIPAYFTIDAGPNVKVLYLPKDESKVKQRLEQIMGVEDVIVSKPGKG ISYL
Sequences:
>Translated_324_residues MKATAKAHTNIALIKYWGKRNEPIILPTNSNLSLTLDGFSTVTTVHFQEELSSDEFFLNDRLVEDAASQRVTGFLDKVRA MAGKEMYARIHSLNHVPTAAGFASSASGFAALAAASTKAIGLELNDTELSILTRQGSGSACRSIYGGFVEWQMGEKEDGS DSYAVPIASKDHWDIRVAAVVLSATEKKVSSRDGMRRTVETSPFYDGWLKQTPKDLEEIKTAIHDKDFEKTGSIAEANCM RMHATTLGANPPFTYWQDTTMRVMQNVQQMREEGIPAYFTIDAGPNVKVLYLPKDESKVKQRLEQIMGVEDVIVSKPGKG ISYL >Mature_324_residues MKATAKAHTNIALIKYWGKRNEPIILPTNSNLSLTLDGFSTVTTVHFQEELSSDEFFLNDRLVEDAASQRVTGFLDKVRA MAGKEMYARIHSLNHVPTAAGFASSASGFAALAAASTKAIGLELNDTELSILTRQGSGSACRSIYGGFVEWQMGEKEDGS DSYAVPIASKDHWDIRVAAVVLSATEKKVSSRDGMRRTVETSPFYDGWLKQTPKDLEEIKTAIHDKDFEKTGSIAEANCM RMHATTLGANPPFTYWQDTTMRVMQNVQQMREEGIPAYFTIDAGPNVKVLYLPKDESKVKQRLEQIMGVEDVIVSKPGKG ISYL
Specific function: Unknown
COG id: COG3407
COG function: function code I; Mevalonate pyrophosphate decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505289, Length=309, Percent_Identity=38.8349514563107, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17537201, Length=334, Percent_Identity=31.1377245508982, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17537203, Length=197, Percent_Identity=34.5177664974619, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6324371, Length=326, Percent_Identity=38.6503067484663, Blast_Score=181, Evalue=2e-46, Organism=Drosophila melanogaster, GI28571205, Length=303, Percent_Identity=38.2838283828383, Blast_Score=171, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.33
Molecular weight: Translated: 35755; Mature: 35755
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATAKAHTNIALIKYWGKRNEPIILPTNSNLSLTLDGFSTVTTVHFQEELSSDEFFLND CCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEECCCCEEEEEEEHHHCCCCCEEEHH RLVEDAASQRVTGFLDKVRAMAGKEMYARIHSLNHVPTAAGFASSASGFAALAAASTKAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCEEE GLELNDTELSILTRQGSGSACRSIYGGFVEWQMGEKEDGSDSYAVPIASKDHWDIRVAAV EEEECCCEEEEEEECCCCHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEHE VLSATEKKVSSRDGMRRTVETSPFYDGWLKQTPKDLEEIKTAIHDKDFEKTGSIAEANCM EHHHHHHHHHHCCCCHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHCCCCCHHHHE RMHATTLGANPPFTYWQDTTMRVMQNVQQMREEGIPAYFTIDAGPNVKVLYLPKDESKVK EEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHH QRLEQIMGVEDVIVSKPGKGISYL HHHHHHCCHHHHEECCCCCCCCCC >Mature Secondary Structure MKATAKAHTNIALIKYWGKRNEPIILPTNSNLSLTLDGFSTVTTVHFQEELSSDEFFLND CCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEECCCCEEEEEEEHHHCCCCCEEEHH RLVEDAASQRVTGFLDKVRAMAGKEMYARIHSLNHVPTAAGFASSASGFAALAAASTKAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCEEE GLELNDTELSILTRQGSGSACRSIYGGFVEWQMGEKEDGSDSYAVPIASKDHWDIRVAAV EEEECCCEEEEEEECCCCHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEHE VLSATEKKVSSRDGMRRTVETSPFYDGWLKQTPKDLEEIKTAIHDKDFEKTGSIAEANCM EHHHHHHHHHHCCCCHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHCCCCCHHHHE RMHATTLGANPPFTYWQDTTMRVMQNVQQMREEGIPAYFTIDAGPNVKVLYLPKDESKVK EEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHH QRLEQIMGVEDVIVSKPGKGISYL HHHHHHCCHHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; (R)-5-diphosphomevalonate
Specific reaction: ATP + (R)-5-diphosphomevalonate = ADP + phosphate + isopentenyl diphosphate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA