| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918741
Identifier: 229918741
GI number: 229918741
Start: 2988747
End: 2989307
Strand: Direct
Name: 229918741
Synonym: EAT1b_3029
Alternate gene names: NA
Gene position: 2988747-2989307 (Clockwise)
Preceding gene: 229918740
Following gene: 229918742
Centisome position: 99.63
GC content: 47.24
Gene sequence:
>561_bases ATGGTTCAACTCTCTTTAAAACGCAAGATGAAAGTATTACTTGTCATAGATCGACTGCAAGACGATGATTTCGGCGTGCC TCTCGGTGGACATCTCGGGTTAAAGCTTTCACATGTGCTCTTAAAAGAGTCGATACCGTTTGGGCGTCTCATCCAGGACC AAACCGTCGCCGAAGCGATCGGACATGCTTACTTGAAACGAATCGGAGTCGAGACCATGTTCACGGGCGAAGAATCCTAT TATCCGGAACTTCTTCGTGGCAACCGTCAACTCAGCTCAACAAACGAAGATTATTATAAAACGGTGCAACGCTACGTCAA ACATCTTTTAGCGGTTCATTCAAAATGTACGAAACTACATACCATCGTCTTGTTCGGACGGTCGACGCAACGTCTGTTTT CAGATGCGCTCCTCCGCCTCGAAGAAGAGAATGAGCATGTCGCTGCTACATTTAACGAGATGGCCATCTTTCAGATGCCC GCCGTATCGAGAGTGGTACGAGATGAACGGATTCATCAAATCCGACAAGTCGTAGCGGATCTTGCACCTTCGAATGCGTA A
Upstream 100 bases:
>100_bases CAAACAATGGGAATAACTAAGGAAAGCAGGGCGACATTGTGCGCCCTGTTTTTCGTTTGACTTTGCTATAATGAAAAGAA AGGGAACAGGATGGTGACAC
Downstream 100 bases:
>100_bases TGAAAGAAGGTGACTGGATGCGAAAATCTCGCTCTGTCGAAGAAATGATCAAACAACTAAAAGACGATCCTGGTTTTTCA AACCATGTACGTCATTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MVQLSLKRKMKVLLVIDRLQDDDFGVPLGGHLGLKLSHVLLKESIPFGRLIQDQTVAEAIGHAYLKRIGVETMFTGEESY YPELLRGNRQLSSTNEDYYKTVQRYVKHLLAVHSKCTKLHTIVLFGRSTQRLFSDALLRLEEENEHVAATFNEMAIFQMP AVSRVVRDERIHQIRQVVADLAPSNA
Sequences:
>Translated_186_residues MVQLSLKRKMKVLLVIDRLQDDDFGVPLGGHLGLKLSHVLLKESIPFGRLIQDQTVAEAIGHAYLKRIGVETMFTGEESY YPELLRGNRQLSSTNEDYYKTVQRYVKHLLAVHSKCTKLHTIVLFGRSTQRLFSDALLRLEEENEHVAATFNEMAIFQMP AVSRVVRDERIHQIRQVVADLAPSNA >Mature_186_residues MVQLSLKRKMKVLLVIDRLQDDDFGVPLGGHLGLKLSHVLLKESIPFGRLIQDQTVAEAIGHAYLKRIGVETMFTGEESY YPELLRGNRQLSSTNEDYYKTVQRYVKHLLAVHSKCTKLHTIVLFGRSTQRLFSDALLRLEEENEHVAATFNEMAIFQMP AVSRVVRDERIHQIRQVVADLAPSNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21228; Mature: 21228
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQLSLKRKMKVLLVIDRLQDDDFGVPLGGHLGLKLSHVLLKESIPFGRLIQDQTVAEAI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH GHAYLKRIGVETMFTGEESYYPELLRGNRQLSSTNEDYYKTVQRYVKHLLAVHSKCTKLH HHHHHHHHCCHHEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TIVLFGRSTQRLFSDALLRLEEENEHVAATFNEMAIFQMPAVSRVVRDERIHQIRQVVAD HHEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPSNA HCCCCC >Mature Secondary Structure MVQLSLKRKMKVLLVIDRLQDDDFGVPLGGHLGLKLSHVLLKESIPFGRLIQDQTVAEAI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH GHAYLKRIGVETMFTGEESYYPELLRGNRQLSSTNEDYYKTVQRYVKHLLAVHSKCTKLH HHHHHHHHCCHHEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TIVLFGRSTQRLFSDALLRLEEENEHVAATFNEMAIFQMPAVSRVVRDERIHQIRQVVAD HHEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPSNA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA