| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ponA [H]
Identifier: 229918740
GI number: 229918740
Start: 2986042
End: 2988666
Strand: Direct
Name: ponA [H]
Synonym: EAT1b_3028
Alternate gene names: 229918740
Gene position: 2986042-2988666 (Clockwise)
Preceding gene: 229918739
Following gene: 229918741
Centisome position: 99.54
GC content: 45.45
Gene sequence:
>2625_bases ATGGAGCGAAGTAGGGTCGCACGTCGACAAGATTCGACGACGAATAAACGCAAAAAAACTGGGAAACAACCAAAGACGAA AAGTAAGAAACCGATGTGGAAACGCATCTTTTTATTAGGCTTCATGTTATTTATTGCTGCGGTAATCGCATTCGGCGCCT ATACGGTATATGCCATTGCGACGGCACCAGAACTAGATGAAGACAAACTTGTCGATACGTATCCGATTCAGTTGCTTTCG GCTGAAGGAGAACCGCTCGAAGGGGCGGGTCAGATTCGAGAGTATGTCTCCATCGACGACATCTCTGAAGTGATGCAACA AGCGGTCGTGTCAATCGAAGACCGTCGTTTCTATGAGCATAACGGGATTGACTTACGTCGAATCGGCGGAGCCGTCGTTG CCAACTTGACAGACGGTTTCGGTGCAGAAGGTGGATCGACCATCACACAACAATTGGTCAAGCAGTCGTTTCTTTCGACA GATAAGAAGTTAAAACGTAAGCTTCAAGAACAATGGCTCGCACTCAAACTCGAGCGTGAGTATACGAAAGAACAGATTTT AGAGATGTACTTGAACAAAAACTATTATGGTAGTGGTGGATACGGTGTGCAAACCGCATCGAAACGTTACTTCAATAAGC CGGTCTCTGAGGTCAATTATCAAGAGGCCGCGATTCTCGCAGGTCTCCCGCAACGTCCAAGTGCCTACGATCCAATCAAT GGTGATCAGGAGTTGACCCGCTACCGTCAAGAGCAAGTCTTGTCTGCGATGAAACGTGACGGACATATTTCTGAGGAGCA GTACAATGAGGCACTTGATGTCTCCATTGCTGACGTCATCTCACCAGGTGAAGAGACGGAAGAAGAAGCGTTCACACGTG CGATTTACTCTCGTGTATTGAATGAGTTAGAAGAGGACTATGGTCTTGAACAGTCAGATATTTACGGGACTGGTTTGAAA GTTTATACGTCAATCAACAAAGAGTTACACACAAAAATCAACAGTGATATTAAATCGAATAATGTTAATTTACAAACAAG TAGTTTCCCTGAAGATTTACGAATGGGTGCAACCGTCTTGAATACAAAGACCGGTGAAATTGTCGCTATCGTAGACAGTC AACAGGCGAAGCAAGGTGATACCACATATCGTGACTACTCAAATGAAAAGTATCAAATCGGATCGACAGCTAAACCATTT TTCGATTATGGTCCTGGAATTGAAAATGGGCAGTGGTCGACAGGTAAAGTGTTGCTTGACGCTAAATTAGATGGCACATA TAGTCCGAATAACTATTATTCAGGTTTCCGTGGACCAAATACGATGCGCCAATACTTGAAAATTTCAGCGAACACGCCAG CAGTTCGTGCTTTCCAAGAAGTGCGGGATGAGTATGGACAAGAAGCAATCGAATCGTTCGTTAAAAATGTAGGAATCGAA CCTTCATATTCTGGCGATGAACTCAACGAATCTAATGCTTTAGGTACGGCAGAAGCGAGCACGACACAGATGGCTGCAGC TTATGCAACACTTGGTGCGAATGGGATGTATACAAAACCGCACTTGATTCAAAAAATTGAATTCAATGATGGTTCAAGTA TTAATTCACCGATTAAAGCCAAGCAAGCAATGGAAGATTATACAGCGTATATGTTGACAGACATGCTTCGTGATGTTGTG AGTGCTGAAGGTGGAACTTATGTACCTGGCGCGTTCCCATGGGACGTAGCAGGTAAAACGGGTACGACGAACGAGCCTAA CTCTACAAATCCGAAAGATAAATGGTTTACCGGTTATTCTACGGATTACTCGATCTCAGTATGGACAGGAAAAACGAAAG ATTCGACAGTCGCTTCGTTCGATCCAGACTATGCCCAATACTATTTCGAGTATATGATGCAACAAGTGACGAATGCGACG GGACAACCGGATCGATTCCAACGTCCGGACTCAGTCTTATCACTTGGCAATGAACTCTATGTAAAAGGGACAAAACCAAA AGATCTTCAACCTGAGAAGTTGGTTGCTCCGACTGGGGCAAGTGTCAACTATGACGAAGAAGCCCAAACCGGTTCTGTCT CATGGTCATACGATTTCGATGGTGCACAAGCAGATGGCTATACGGATGTCACGTTCACAGTGACACAGAAGTCAGCTGAC GGAAGTGAGCAAGTCGTCGGAACGACCGGGGAGACGAGTGTAAATATTGCAAACTTGGCCGAAGGAGACACAACGTTTAC CATTGTCGCGAATGCAACGAACCCGTTGACGGGTGAGCAGCAATCAGCACCGGCGCAAGCGAGCTACTCAATCGAACCGA AAGAAGAGCCAAAGGAAGAAGAGGAAAACCCTTCTGACGAGGAAAATTCCGAAGATGAACCATCAGACGAAAATAACGGG AACGGGAATGAAAACGGAAATGGTAATGGTAACGGAGGCGGAAACGGCGAAGATACCACCGACGAACAAACTCCTGATGA ACCGGCGACGGATGAAGGTTCTGGCGAAGGAACAGACGAACCAACTGACGGAGATGATTCAGGAACTCCGTTAGAGGGAC AATCCAATGGTGAATCGTCTGACACGAATCGTGGAAATGGCAATTCAAACAATGGGAATAACTAA
Upstream 100 bases:
>100_bases AAAAGGAAGCGATTGAAGTTCCGACGAGAGCCTTGCCGTCGATTGATTATTTGACGGTGCTCGATCAATGGCTCGATTGA ATAGAAGGAGTGAACCATGA
Downstream 100 bases:
>100_bases GGAAAGCAGGGCGACATTGTGCGCCCTGTTTTTCGTTTGACTTTGCTATAATGAAAAGAAAGGGAACAGGATGGTGACAC ATGGTTCAACTCTCTTTAAA
Product: peptidoglycan glycosyltransferase
Products: NA
Alternate protein names: PBP1; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 874; Mature: 874
Protein sequence:
>874_residues MERSRVARRQDSTTNKRKKTGKQPKTKSKKPMWKRIFLLGFMLFIAAVIAFGAYTVYAIATAPELDEDKLVDTYPIQLLS AEGEPLEGAGQIREYVSIDDISEVMQQAVVSIEDRRFYEHNGIDLRRIGGAVVANLTDGFGAEGGSTITQQLVKQSFLST DKKLKRKLQEQWLALKLEREYTKEQILEMYLNKNYYGSGGYGVQTASKRYFNKPVSEVNYQEAAILAGLPQRPSAYDPIN GDQELTRYRQEQVLSAMKRDGHISEEQYNEALDVSIADVISPGEETEEEAFTRAIYSRVLNELEEDYGLEQSDIYGTGLK VYTSINKELHTKINSDIKSNNVNLQTSSFPEDLRMGATVLNTKTGEIVAIVDSQQAKQGDTTYRDYSNEKYQIGSTAKPF FDYGPGIENGQWSTGKVLLDAKLDGTYSPNNYYSGFRGPNTMRQYLKISANTPAVRAFQEVRDEYGQEAIESFVKNVGIE PSYSGDELNESNALGTAEASTTQMAAAYATLGANGMYTKPHLIQKIEFNDGSSINSPIKAKQAMEDYTAYMLTDMLRDVV SAEGGTYVPGAFPWDVAGKTGTTNEPNSTNPKDKWFTGYSTDYSISVWTGKTKDSTVASFDPDYAQYYFEYMMQQVTNAT GQPDRFQRPDSVLSLGNELYVKGTKPKDLQPEKLVAPTGASVNYDEEAQTGSVSWSYDFDGAQADGYTDVTFTVTQKSAD GSEQVVGTTGETSVNIANLAEGDTTFTIVANATNPLTGEQQSAPAQASYSIEPKEEPKEEEENPSDEENSEDEPSDENNG NGNENGNGNGNGGGNGEDTTDEQTPDEPATDEGSGEGTDEPTDGDDSGTPLEGQSNGESSDTNRGNGNSNNGNN
Sequences:
>Translated_874_residues MERSRVARRQDSTTNKRKKTGKQPKTKSKKPMWKRIFLLGFMLFIAAVIAFGAYTVYAIATAPELDEDKLVDTYPIQLLS AEGEPLEGAGQIREYVSIDDISEVMQQAVVSIEDRRFYEHNGIDLRRIGGAVVANLTDGFGAEGGSTITQQLVKQSFLST DKKLKRKLQEQWLALKLEREYTKEQILEMYLNKNYYGSGGYGVQTASKRYFNKPVSEVNYQEAAILAGLPQRPSAYDPIN GDQELTRYRQEQVLSAMKRDGHISEEQYNEALDVSIADVISPGEETEEEAFTRAIYSRVLNELEEDYGLEQSDIYGTGLK VYTSINKELHTKINSDIKSNNVNLQTSSFPEDLRMGATVLNTKTGEIVAIVDSQQAKQGDTTYRDYSNEKYQIGSTAKPF FDYGPGIENGQWSTGKVLLDAKLDGTYSPNNYYSGFRGPNTMRQYLKISANTPAVRAFQEVRDEYGQEAIESFVKNVGIE PSYSGDELNESNALGTAEASTTQMAAAYATLGANGMYTKPHLIQKIEFNDGSSINSPIKAKQAMEDYTAYMLTDMLRDVV SAEGGTYVPGAFPWDVAGKTGTTNEPNSTNPKDKWFTGYSTDYSISVWTGKTKDSTVASFDPDYAQYYFEYMMQQVTNAT GQPDRFQRPDSVLSLGNELYVKGTKPKDLQPEKLVAPTGASVNYDEEAQTGSVSWSYDFDGAQADGYTDVTFTVTQKSAD GSEQVVGTTGETSVNIANLAEGDTTFTIVANATNPLTGEQQSAPAQASYSIEPKEEPKEEEENPSDEENSEDEPSDENNG NGNENGNGNGNGGGNGEDTTDEQTPDEPATDEGSGEGTDEPTDGDDSGTPLEGQSNGESSDTNRGNGNSNNGNN >Mature_874_residues MERSRVARRQDSTTNKRKKTGKQPKTKSKKPMWKRIFLLGFMLFIAAVIAFGAYTVYAIATAPELDEDKLVDTYPIQLLS AEGEPLEGAGQIREYVSIDDISEVMQQAVVSIEDRRFYEHNGIDLRRIGGAVVANLTDGFGAEGGSTITQQLVKQSFLST DKKLKRKLQEQWLALKLEREYTKEQILEMYLNKNYYGSGGYGVQTASKRYFNKPVSEVNYQEAAILAGLPQRPSAYDPIN GDQELTRYRQEQVLSAMKRDGHISEEQYNEALDVSIADVISPGEETEEEAFTRAIYSRVLNELEEDYGLEQSDIYGTGLK VYTSINKELHTKINSDIKSNNVNLQTSSFPEDLRMGATVLNTKTGEIVAIVDSQQAKQGDTTYRDYSNEKYQIGSTAKPF FDYGPGIENGQWSTGKVLLDAKLDGTYSPNNYYSGFRGPNTMRQYLKISANTPAVRAFQEVRDEYGQEAIESFVKNVGIE PSYSGDELNESNALGTAEASTTQMAAAYATLGANGMYTKPHLIQKIEFNDGSSINSPIKAKQAMEDYTAYMLTDMLRDVV SAEGGTYVPGAFPWDVAGKTGTTNEPNSTNPKDKWFTGYSTDYSISVWTGKTKDSTVASFDPDYAQYYFEYMMQQVTNAT GQPDRFQRPDSVLSLGNELYVKGTKPKDLQPEKLVAPTGASVNYDEEAQTGSVSWSYDFDGAQADGYTDVTFTVTQKSAD GSEQVVGTTGETSVNIANLAEGDTTFTIVANATNPLTGEQQSAPAQASYSIEPKEEPKEEEENPSDEENSEDEPSDENNG NGNENGNGNGNGGGNGEDTTDEQTPDEPATDEGSGEGTDEPTDGDDSGTPLEGQSNGESSDTNRGNGNSNNGNN
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=Probably found all over the whole cell at low concentrations. Also localizes to the division site in vegetative cells [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fibronectin type-III domain [H]
Homologues:
Organism=Escherichia coli, GI1788867, Length=603, Percent_Identity=27.5290215588723, Blast_Score=177, Evalue=3e-45, Organism=Escherichia coli, GI87082258, Length=313, Percent_Identity=34.185303514377, Blast_Score=173, Evalue=4e-44, Organism=Escherichia coli, GI1786343, Length=585, Percent_Identity=26.4957264957265, Blast_Score=150, Evalue=4e-37, Organism=Escherichia coli, GI1789601, Length=168, Percent_Identity=36.9047619047619, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR001264 - InterPro: IPR013783 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00041 fn3; PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 95887; Mature: 95887
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSRVARRQDSTTNKRKKTGKQPKTKSKKPMWKRIFLLGFMLFIAAVIAFGAYTVYAIA CCHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE TAPELDEDKLVDTYPIQLLSAEGEPLEGAGQIREYVSIDDISEVMQQAVVSIEDRRFYEH ECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC NGIDLRRIGGAVVANLTDGFGAEGGSTITQQLVKQSFLSTDKKLKRKLQEQWLALKLERE CCCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTKEQILEMYLNKNYYGSGGYGVQTASKRYFNKPVSEVNYQEAAILAGLPQRPSAYDPIN HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCCCCCCCC GDQELTRYRQEQVLSAMKRDGHISEEQYNEALDVSIADVISPGEETEEEAFTRAIYSRVL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHH NELEEDYGLEQSDIYGTGLKVYTSINKELHTKINSDIKSNNVNLQTSSFPEDLRMGATVL HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCEE NTKTGEIVAIVDSQQAKQGDTTYRDYSNEKYQIGSTAKPFFDYGPGIENGQWSTGKVLLD ECCCCCEEEEECCCCCCCCCCCHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCEEEE AKLDGTYSPNNYYSGFRGPNTMRQYLKISANTPAVRAFQEVRDEYGQEAIESFVKNVGIE EECCCCCCCCCCCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSYSGDELNESNALGTAEASTTQMAAAYATLGANGMYTKPHLIQKIEFNDGSSINSPIKA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCCCHHH KQAMEDYTAYMLTDMLRDVVSAEGGTYVPGAFPWDVAGKTGTTNEPNSTNPKDKWFTGYS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDYSISVWTGKTKDSTVASFDPDYAQYYFEYMMQQVTNATGQPDRFQRPDSVLSLGNELY CCEEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHCCCEEE VKGTKPKDLQPEKLVAPTGASVNYDEEAQTGSVSWSYDFDGAQADGYTDVTFTVTQKSAD EECCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC GSEQVVGTTGETSVNIANLAEGDTTFTIVANATNPLTGEQQSAPAQASYSIEPKEEPKEE CCCCEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EENPSDEENSEDEPSDENNGNGNENGNGNGNGGGNGEDTTDEQTPDEPATDEGSGEGTDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTDGDDSGTPLEGQSNGESSDTNRGNGNSNNGNN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MERSRVARRQDSTTNKRKKTGKQPKTKSKKPMWKRIFLLGFMLFIAAVIAFGAYTVYAIA CCHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE TAPELDEDKLVDTYPIQLLSAEGEPLEGAGQIREYVSIDDISEVMQQAVVSIEDRRFYEH ECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC NGIDLRRIGGAVVANLTDGFGAEGGSTITQQLVKQSFLSTDKKLKRKLQEQWLALKLERE CCCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTKEQILEMYLNKNYYGSGGYGVQTASKRYFNKPVSEVNYQEAAILAGLPQRPSAYDPIN HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCCCCCCCC GDQELTRYRQEQVLSAMKRDGHISEEQYNEALDVSIADVISPGEETEEEAFTRAIYSRVL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHH NELEEDYGLEQSDIYGTGLKVYTSINKELHTKINSDIKSNNVNLQTSSFPEDLRMGATVL HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCEE NTKTGEIVAIVDSQQAKQGDTTYRDYSNEKYQIGSTAKPFFDYGPGIENGQWSTGKVLLD ECCCCCEEEEECCCCCCCCCCCHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCEEEE AKLDGTYSPNNYYSGFRGPNTMRQYLKISANTPAVRAFQEVRDEYGQEAIESFVKNVGIE EECCCCCCCCCCCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSYSGDELNESNALGTAEASTTQMAAAYATLGANGMYTKPHLIQKIEFNDGSSINSPIKA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCCCHHH KQAMEDYTAYMLTDMLRDVVSAEGGTYVPGAFPWDVAGKTGTTNEPNSTNPKDKWFTGYS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDYSISVWTGKTKDSTVASFDPDYAQYYFEYMMQQVTNATGQPDRFQRPDSVLSLGNELY CCEEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHCCCEEE VKGTKPKDLQPEKLVAPTGASVNYDEEAQTGSVSWSYDFDGAQADGYTDVTFTVTQKSAD EECCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC GSEQVVGTTGETSVNIANLAEGDTTFTIVANATNPLTGEQQSAPAQASYSIEPKEEPKEE CCCCEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EENPSDEENSEDEPSDENNGNGNENGNGNGNGGGNGEDTTDEQTPDEPATDEGSGEGTDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTDGDDSGTPLEGQSNGESSDTNRGNGNSNNGNN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7814321; 8760912; 9384377; 9721295; 10322023 [H]