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The map label for this gene is dinG [H]

Identifier: 229918731

GI number: 229918731

Start: 2976160

End: 2978970

Strand: Direct

Name: dinG [H]

Synonym: EAT1b_3018

Alternate gene names: 229918731

Gene position: 2976160-2978970 (Clockwise)

Preceding gene: 229918730

Following gene: 229918732

Centisome position: 99.21

GC content: 49.13

Gene sequence:

>2811_bases
ATGGACACGTATGTGATTGTGGATTTAGAGACAACGGGTCATTCCGTAAAGTCCGGAGATGAACTGATTGAGTTTGCGGC
GGTCGTCGTACAAGAGGGCGAAGTGATTGAACGCTACAGCACCTTGATTCGACCGAGTCGACCAATCCCACCTTTTATTA
CGCAATTGACAACGATTAGTGACGAAGATGTAAGTGACGCACCTACATTTGAAGATGTGATTCCCGACATTTGGAAAATG
CTAGATGGACGGGTATTTGTCGCGCATAACGTCGCATTTGATTTAACTTTTTTAAACGAGAGTCTTGAACAAGCGGGTTA
CCTTGCGTTTCAAGGGAGAGCCATTGATACAGTCGAATTGGCCCGTATTCTGTATCCGACTTTAGAGAGTCATGCGTTAG
AAGCGCTATCGGATACGTTTGACCTCGTACATACAGACGCACATCGGGCACTCAGTGATGCAGAGGCGACGGCAGAGCTC
TTCATTCGGATGCTCGACCGTTTGCGCGATTTACCGATGGTGACGCTGAAACGACTTCGAGAGTTATCTGAATCATGGAC
GAGTCATATCGAACCGTTACTCGATGAGATCATCCTTGAGGTCGGGATTCGTCCAGACGACGAAACCCGTTTTGATATCC
ATCGTAAAATTGCGTTACGACGACCGGTGGATGCGTTCGTTCCGGCGACAGAACGTGAACCGTTCGAGCCGTTCCTTTTG
CGGACGATTGAAGAGACGCTCCCTTCACTGTTTGATCAGTTTGAACCGAGACAGAGTCAATTCGAAATGATGCGTCACGT
CTATAAAGCGCTAGACGATGAGGAAACATTGTTAGTCGAGGCGGGTACGGGAACGGGTAAAACGCTTGCGTACTTGATTC
CGAGTGCCCACCATGCCCTCGAGACGAAACGACCGGTCGTCATTAGTACGCATACCATTCAATTGCAGGAACAGTTGTTA
AATCGAGACTTGCCCGTGCTTCGTCAGATTTTTCCTGAGATTGAATTCACGTTGTTGAAAGGAAGACGCAATTATATCGA
TTTACGCAAGTTCGAGATGGTGCTCGACGAATCGAATGATGGTCTTTTGGCATCGATGTGTAAAGCGATGGTGCTCGTCT
GGCTCACTGAGACCGAGACCGGGGACTTAGAGGAACTTTCATTTCCGGGCTCAGCGACACAAGGACCCGCTTCGTTCAAG
CGTTTGATTCAAGCAGATGCTTCAAGTGATTTTGGACGGTTCGATCCGTGGTATAGCCGTGACTTTTTCACGAAAGCCGT
GTTGCGCTCGAAAGAAGCGGACCTGATTGTGACCAATCATGCCTTACTGTTCTCGGACTTACAGCATCAGGCAGGCATTT
TACCGACGGACACGCCTCTCGTATTAGATGAGGCCCATCAAGTCGAGGAAGTGGCCTCGCATCATTTCGGTGTGACATTT
GATGCGATTCAATTTGACCGCCTCTTCAAATGGTTCGGCTACGGAGCGGATGGCAAATTCCATTCTCGCATCATCCAGTT
AGCCGATTTGACATCCGTAACCGAAGAGGCCGAGGCATTCAGTCAACAAATTGATTCGGCCCTCGCTCGGGTCGAAGAAG
AACTCGAAGATCTTCTGACTTCCCTTCAATCGTTAGGTAAGAAAAAAGAACCTCGACAAACGGTTCGTTTCGAACGGGAA
GGGGCAACGTTTAGACCAATTCGAGAAGTGGCCAATCGACTCGAGGACAAACTGAGAACGTTGCGGACGTCACTCCGACA
TCTCCATCGACTGCTCGATGAACGTAAAGAACATATGACGTTTAAACAGCGCGCCCTTCTCGGTGATTTAAAAACGTTGA
TTGGAGACGTGCGCGAACTCGAGAGTGTCATCTATGAGACGATGTTGACGCGTGACGATGATGCGGTCAGCTGGGTCGAA
CTGAATTTAGGAAATCGGAAATTAACCTCGGTGTACACGCAACCGGTCGAAATCGGACCGCTGTTGCATGAACGTCTGTT
TAAGAAGCGACCGACAATCTTAACATCAGCGACGATGACGGTCTCAGGGAAGTTCAGCTTTATGGAACGACGCCTCGGAT
TAGAAGGAGAACCGGTCCGAAGAGTCGTCTTACCGTCGCCATTCAACTTCAAAGAACAGGCCAAACTGTTTGTACCGTCG
GACTTCCCGTTGATCAATGAAGTGCCGCTCCCTCAGTTCGTCGATCAGACGGCCCAGTCGATTGTCCAAATCGCGAACGT
GACGAAAGGAAGGATGCTCGTCTTGTTCACATCGAACGAATTGCTTCGACTCACTTATGAACAAGTCAAAGACCATCTTG
ACCCGTCTTATACACTTCTCGCACAAGGTGTGAGCGGTGGCTCACGTAGCCGCTTGACGAAACAGTTCAAACGGATGGAA
CAGTCGATTCTCTTTGGAACAGCTAGCTTTTGGGAAGGTGTCGATATTCCGGGGGAGGCGTTGACATGCCTTGTCATTGT
AAGACTTCCCTTCGCACCGCCCGACCAGCCCATCATGCAAGCTCGTTCTGAGAAAATTGAAGCGATGGGGAAATCACCGT
TCTTTGAGTTATCCCTGCCCCAAGCGGTCATTCGCTTCAAACAAGGTGTCGGTCGATTGATTCGATCGAAAGGGGATTAT
GGTGCCGTCTTCGTATTCGACCGGCGTGTGGAGACGACACGTTACGGCAAACAGTTCATCAACAGCTTGCCTAAAGTTGA
CCGGATTGAAGGAACGCTTGAAACGTCGTTATCCGAGTTAGAGTTGTTCTTAGACGAGAAGGAAAAGTCTGTGGCACGAA
ATGACAGATAA

Upstream 100 bases:

>100_bases
CGGGGGTGTCGGCAGAGGCATCCCCGTTTTTTCGTTATTCGTTCTATGGTAAGATGAGACAGACAGAAAGCACGAGCGTG
CCAAAGATGGGATGGATGTT

Downstream 100 bases:

>100_bases
CGCTAGGCATCACGATATTATCGTTTTATAATGATACGTATAGTGTTTTTAGAGGAGGAGTCAATATGAACTCGAATATT
GAGACGCTGGCGAGCGTGCG

Product: bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 936; Mature: 936

Protein sequence:

>936_residues
MDTYVIVDLETTGHSVKSGDELIEFAAVVVQEGEVIERYSTLIRPSRPIPPFITQLTTISDEDVSDAPTFEDVIPDIWKM
LDGRVFVAHNVAFDLTFLNESLEQAGYLAFQGRAIDTVELARILYPTLESHALEALSDTFDLVHTDAHRALSDAEATAEL
FIRMLDRLRDLPMVTLKRLRELSESWTSHIEPLLDEIILEVGIRPDDETRFDIHRKIALRRPVDAFVPATEREPFEPFLL
RTIEETLPSLFDQFEPRQSQFEMMRHVYKALDDEETLLVEAGTGTGKTLAYLIPSAHHALETKRPVVISTHTIQLQEQLL
NRDLPVLRQIFPEIEFTLLKGRRNYIDLRKFEMVLDESNDGLLASMCKAMVLVWLTETETGDLEELSFPGSATQGPASFK
RLIQADASSDFGRFDPWYSRDFFTKAVLRSKEADLIVTNHALLFSDLQHQAGILPTDTPLVLDEAHQVEEVASHHFGVTF
DAIQFDRLFKWFGYGADGKFHSRIIQLADLTSVTEEAEAFSQQIDSALARVEEELEDLLTSLQSLGKKKEPRQTVRFERE
GATFRPIREVANRLEDKLRTLRTSLRHLHRLLDERKEHMTFKQRALLGDLKTLIGDVRELESVIYETMLTRDDDAVSWVE
LNLGNRKLTSVYTQPVEIGPLLHERLFKKRPTILTSATMTVSGKFSFMERRLGLEGEPVRRVVLPSPFNFKEQAKLFVPS
DFPLINEVPLPQFVDQTAQSIVQIANVTKGRMLVLFTSNELLRLTYEQVKDHLDPSYTLLAQGVSGGSRSRLTKQFKRME
QSILFGTASFWEGVDIPGEALTCLVIVRLPFAPPDQPIMQARSEKIEAMGKSPFFELSLPQAVIRFKQGVGRLIRSKGDY
GAVFVFDRRVETTRYGKQFINSLPKVDRIEGTLETSLSELELFLDEKEKSVARNDR

Sequences:

>Translated_936_residues
MDTYVIVDLETTGHSVKSGDELIEFAAVVVQEGEVIERYSTLIRPSRPIPPFITQLTTISDEDVSDAPTFEDVIPDIWKM
LDGRVFVAHNVAFDLTFLNESLEQAGYLAFQGRAIDTVELARILYPTLESHALEALSDTFDLVHTDAHRALSDAEATAEL
FIRMLDRLRDLPMVTLKRLRELSESWTSHIEPLLDEIILEVGIRPDDETRFDIHRKIALRRPVDAFVPATEREPFEPFLL
RTIEETLPSLFDQFEPRQSQFEMMRHVYKALDDEETLLVEAGTGTGKTLAYLIPSAHHALETKRPVVISTHTIQLQEQLL
NRDLPVLRQIFPEIEFTLLKGRRNYIDLRKFEMVLDESNDGLLASMCKAMVLVWLTETETGDLEELSFPGSATQGPASFK
RLIQADASSDFGRFDPWYSRDFFTKAVLRSKEADLIVTNHALLFSDLQHQAGILPTDTPLVLDEAHQVEEVASHHFGVTF
DAIQFDRLFKWFGYGADGKFHSRIIQLADLTSVTEEAEAFSQQIDSALARVEEELEDLLTSLQSLGKKKEPRQTVRFERE
GATFRPIREVANRLEDKLRTLRTSLRHLHRLLDERKEHMTFKQRALLGDLKTLIGDVRELESVIYETMLTRDDDAVSWVE
LNLGNRKLTSVYTQPVEIGPLLHERLFKKRPTILTSATMTVSGKFSFMERRLGLEGEPVRRVVLPSPFNFKEQAKLFVPS
DFPLINEVPLPQFVDQTAQSIVQIANVTKGRMLVLFTSNELLRLTYEQVKDHLDPSYTLLAQGVSGGSRSRLTKQFKRME
QSILFGTASFWEGVDIPGEALTCLVIVRLPFAPPDQPIMQARSEKIEAMGKSPFFELSLPQAVIRFKQGVGRLIRSKGDY
GAVFVFDRRVETTRYGKQFINSLPKVDRIEGTLETSLSELELFLDEKEKSVARNDR
>Mature_936_residues
MDTYVIVDLETTGHSVKSGDELIEFAAVVVQEGEVIERYSTLIRPSRPIPPFITQLTTISDEDVSDAPTFEDVIPDIWKM
LDGRVFVAHNVAFDLTFLNESLEQAGYLAFQGRAIDTVELARILYPTLESHALEALSDTFDLVHTDAHRALSDAEATAEL
FIRMLDRLRDLPMVTLKRLRELSESWTSHIEPLLDEIILEVGIRPDDETRFDIHRKIALRRPVDAFVPATEREPFEPFLL
RTIEETLPSLFDQFEPRQSQFEMMRHVYKALDDEETLLVEAGTGTGKTLAYLIPSAHHALETKRPVVISTHTIQLQEQLL
NRDLPVLRQIFPEIEFTLLKGRRNYIDLRKFEMVLDESNDGLLASMCKAMVLVWLTETETGDLEELSFPGSATQGPASFK
RLIQADASSDFGRFDPWYSRDFFTKAVLRSKEADLIVTNHALLFSDLQHQAGILPTDTPLVLDEAHQVEEVASHHFGVTF
DAIQFDRLFKWFGYGADGKFHSRIIQLADLTSVTEEAEAFSQQIDSALARVEEELEDLLTSLQSLGKKKEPRQTVRFERE
GATFRPIREVANRLEDKLRTLRTSLRHLHRLLDERKEHMTFKQRALLGDLKTLIGDVRELESVIYETMLTRDDDAVSWVE
LNLGNRKLTSVYTQPVEIGPLLHERLFKKRPTILTSATMTVSGKFSFMERRLGLEGEPVRRVVLPSPFNFKEQAKLFVPS
DFPLINEVPLPQFVDQTAQSIVQIANVTKGRMLVLFTSNELLRLTYEQVKDHLDPSYTLLAQGVSGGSRSRLTKQFKRME
QSILFGTASFWEGVDIPGEALTCLVIVRLPFAPPDQPIMQARSEKIEAMGKSPFFELSLPQAVIRFKQGVGRLIRSKGDY
GAVFVFDRRVETTRYGKQFINSLPKVDRIEGTLETSLSELELFLDEKEKSVARNDR

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=664, Percent_Identity=30.2710843373494, Blast_Score=256, Evalue=6e-69,
Organism=Escherichia coli, GI1787018, Length=703, Percent_Identity=27.7382645803698, Blast_Score=191, Evalue=2e-49,
Organism=Escherichia coli, GI1788149, Length=166, Percent_Identity=35.5421686746988, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 106668; Mature: 106668

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTYVIVDLETTGHSVKSGDELIEFAAVVVQEGEVIERYSTLIRPSRPIPPFITQLTTIS
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCC
DEDVSDAPTFEDVIPDIWKMLDGRVFVAHNVAFDLTFLNESLEQAGYLAFQGRAIDTVEL
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHCCCEEECCCCCHHHHH
ARILYPTLESHALEALSDTFDLVHTDAHRALSDAEATAELFIRMLDRLRDLPMVTLKRLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ELSESWTSHIEPLLDEIILEVGIRPDDETRFDIHRKIALRRPVDAFVPATEREPFEPFLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
RTIEETLPSLFDQFEPRQSQFEMMRHVYKALDDEETLLVEAGTGTGKTLAYLIPSAHHAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCHHHHH
ETKRPVVISTHTIQLQEQLLNRDLPVLRQIFPEIEFTLLKGRRNYIDLRKFEMVLDESND
HCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GLLASMCKAMVLVWLTETETGDLEELSFPGSATQGPASFKRLIQADASSDFGRFDPWYSR
CHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH
DFFTKAVLRSKEADLIVTNHALLFSDLQHQAGILPTDTPLVLDEAHQVEEVASHHFGVTF
HHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
DAIQFDRLFKWFGYGADGKFHSRIIQLADLTSVTEEAEAFSQQIDSALARVEEELEDLLT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQSLGKKKEPRQTVRFEREGATFRPIREVANRLEDKLRTLRTSLRHLHRLLDERKEHMT
HHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKQRALLGDLKTLIGDVRELESVIYETMLTRDDDAVSWVELNLGNRKLTSVYTQPVEIGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHCCCHHHHH
LLHERLFKKRPTILTSATMTVSGKFSFMERRLGLEGEPVRRVVLPSPFNFKEQAKLFVPS
HHHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEECCC
DFPLINEVPLPQFVDQTAQSIVQIANVTKGRMLVLFTSNELLRLTYEQVKDHLDPSYTLL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHH
AQGVSGGSRSRLTKQFKRMEQSILFGTASFWEGVDIPGEALTCLVIVRLPFAPPDQPIMQ
HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHH
ARSEKIEAMGKSPFFELSLPQAVIRFKQGVGRLIRSKGDYGAVFVFDRRVETTRYGKQFI
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
NSLPKVDRIEGTLETSLSELELFLDEKEKSVARNDR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTYVIVDLETTGHSVKSGDELIEFAAVVVQEGEVIERYSTLIRPSRPIPPFITQLTTIS
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCC
DEDVSDAPTFEDVIPDIWKMLDGRVFVAHNVAFDLTFLNESLEQAGYLAFQGRAIDTVEL
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHCCCEEECCCCCHHHHH
ARILYPTLESHALEALSDTFDLVHTDAHRALSDAEATAELFIRMLDRLRDLPMVTLKRLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ELSESWTSHIEPLLDEIILEVGIRPDDETRFDIHRKIALRRPVDAFVPATEREPFEPFLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
RTIEETLPSLFDQFEPRQSQFEMMRHVYKALDDEETLLVEAGTGTGKTLAYLIPSAHHAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCHHHHH
ETKRPVVISTHTIQLQEQLLNRDLPVLRQIFPEIEFTLLKGRRNYIDLRKFEMVLDESND
HCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GLLASMCKAMVLVWLTETETGDLEELSFPGSATQGPASFKRLIQADASSDFGRFDPWYSR
CHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH
DFFTKAVLRSKEADLIVTNHALLFSDLQHQAGILPTDTPLVLDEAHQVEEVASHHFGVTF
HHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
DAIQFDRLFKWFGYGADGKFHSRIIQLADLTSVTEEAEAFSQQIDSALARVEEELEDLLT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQSLGKKKEPRQTVRFEREGATFRPIREVANRLEDKLRTLRTSLRHLHRLLDERKEHMT
HHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKQRALLGDLKTLIGDVRELESVIYETMLTRDDDAVSWVELNLGNRKLTSVYTQPVEIGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHCCCHHHHH
LLHERLFKKRPTILTSATMTVSGKFSFMERRLGLEGEPVRRVVLPSPFNFKEQAKLFVPS
HHHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEECCC
DFPLINEVPLPQFVDQTAQSIVQIANVTKGRMLVLFTSNELLRLTYEQVKDHLDPSYTLL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHH
AQGVSGGSRSRLTKQFKRMEQSILFGTASFWEGVDIPGEALTCLVIVRLPFAPPDQPIMQ
HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHH
ARSEKIEAMGKSPFFELSLPQAVIRFKQGVGRLIRSKGDYGAVFVFDRRVETTRYGKQFI
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
NSLPKVDRIEGTLETSLSELELFLDEKEKSVARNDR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]