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The map label for this gene is panD

Identifier: 229918730

GI number: 229918730

Start: 2975670

End: 2976053

Strand: Direct

Name: panD

Synonym: EAT1b_3017

Alternate gene names: 229918730

Gene position: 2975670-2976053 (Clockwise)

Preceding gene: 229918729

Following gene: 229918731

Centisome position: 99.19

GC content: 45.05

Gene sequence:

>384_bases
ATGATTCGTACATTTATGCACGCAAAGCTTCATAAAGCAACAGTGACAGAAGCAAACTTACACTACGTCGGTTCGATTAC
AATCGATGAGGATTTAATGGATGCGGTCGGCATCATGGAGAATGAACATGTACACATCACGAACAACCATAATGGTGCTC
GCATCGAGACGTATGTCATCAAAGGGGAACGTGGGTCAGGCGTGATTTGTTTGAACGGTGCGGCAGCACGTCATTTCCAG
GTCGGTGATGTGGTCATCATCATGGCGTACGGTCAAATGACAGCGGAAGAGGCGAAAACGCATCGTCCAAAAGTAGCCGT
GTTGAATGAACAAAATGAGGTCGATCAACTTCTTTACGAAGAGATTGCTCATACAATTTTGTAA

Upstream 100 bases:

>100_bases
CCGTCTCGAGCGACTCGACTGAACTCTTGTTAGCAGTGGCCATTCAGTTTGAACGGGCCCGATTGATTGATAATGTGATT
TGGAAGAAGGGATGAATCCA

Downstream 100 bases:

>100_bases
AGGATTCGGGGGTGTCGGCAGAGGCATCCCCGTTTTTTCGTTATTCGTTCTATGGTAAGATGAGACAGACAGAAAGCACG
AGCGTGCCAAAGATGGGATG

Product: aspartate 1-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIRTFMHAKLHKATVTEANLHYVGSITIDEDLMDAVGIMENEHVHITNNHNGARIETYVIKGERGSGVICLNGAAARHFQ
VGDVVIIMAYGQMTAEEAKTHRPKVAVLNEQNEVDQLLYEEIAHTIL

Sequences:

>Translated_127_residues
MIRTFMHAKLHKATVTEANLHYVGSITIDEDLMDAVGIMENEHVHITNNHNGARIETYVIKGERGSGVICLNGAAARHFQ
VGDVVIIMAYGQMTAEEAKTHRPKVAVLNEQNEVDQLLYEEIAHTIL
>Mature_127_residues
MIRTFMHAKLHKATVTEANLHYVGSITIDEDLMDAVGIMENEHVHITNNHNGARIETYVIKGERGSGVICLNGAAARHFQ
VGDVVIIMAYGQMTAEEAKTHRPKVAVLNEQNEVDQLLYEEIAHTIL

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=116, Percent_Identity=51.7241379310345, Blast_Score=122, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_EXISA (C4L6Q2)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002887376.1
- GeneID:   7868621
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_3017
- OMA:   LYSKIHR
- ProtClustDB:   CLSK2489426
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14133; Mature: 14133

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTFMHAKLHKATVTEANLHYVGSITIDEDLMDAVGIMENEHVHITNNHNGARIETYVI
CCCCHHHHHHHHEEEEECCEEEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCEEEEEEE
KGERGSGVICLNGAAARHFQVGDVVIIMAYGQMTAEEAKTHRPKVAVLNEQNEVDQLLYE
ECCCCCEEEEECCCCCCEEECCCEEEEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHH
EIAHTIL
HHHHHCC
>Mature Secondary Structure
MIRTFMHAKLHKATVTEANLHYVGSITIDEDLMDAVGIMENEHVHITNNHNGARIETYVI
CCCCHHHHHHHHEEEEECCEEEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCEEEEEEE
KGERGSGVICLNGAAARHFQVGDVVIIMAYGQMTAEEAKTHRPKVAVLNEQNEVDQLLYE
ECCCCCEEEEECCCCCCEEECCCEEEEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHH
EIAHTIL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA