| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918706
Identifier: 229918706
GI number: 229918706
Start: 2955210
End: 2955782
Strand: Direct
Name: 229918706
Synonym: EAT1b_2993
Alternate gene names: NA
Gene position: 2955210-2955782 (Clockwise)
Preceding gene: 229918705
Following gene: 229918707
Centisome position: 98.51
GC content: 46.07
Gene sequence:
>573_bases ATGGAACAGTTGACAAATGAATTCGTTGTCACAGACCTTGCTCGTCAAATCGAAACACGTATGAATCATCCCTATTTGAC GAAACACGAGGTTGTACCAGCCGTCGACATGTTATTGCTTCGTTGGATGGTCGAGATGATTGATTTGGAATCGATTGAGC ATCGACAACTCGTGATGGCAACCTATTTCGCACATCAAGCGCTTGATTTACACGACCAAGTGAACAGCAGCCCGAACGGG TCTTTGGCACGCCAATTAAAAGTGCTCGCCGGAGACTTTGCATCGGCTCAGTTTTATAAAATCTTGACGGACTTTCCATC ATCATACAGTGATCGATTCGGTCAGTCTGTACAGCGGGTCAATGCGGCGAAGTGCACCTTATTGCTTGAGAAGAACGTTT CAATGAACGTTTGGCTCGAAGCGAACGTCGGATTGATTCAAACACTTTCCGAACTGATTGAACAACCTTATTTGACAACG AGCGGGAAACGAATGATTGAAAAGAAAGCGACAGCGCTTAGACAAGACCAAAAAGAGCAACTTACGACGTTGCTCGCGCA TGCGGTCGCTTAG
Upstream 100 bases:
>100_bases GCGGCTTTTTTGTTGGGTTTGCGAGTTCGAATGACGTGAATGTGACAAAAATGTGCTATACTATGTCAGAATGACAATGA AGTGGACGAGGGGGGATAGC
Downstream 100 bases:
>100_bases AACGGAAAGGATGTTACGCGTTGCAACCGATAGAAAAAGAGCAAAAAGTATACGAAGTATTTCAGTCCATTTCTCCGAGC TACGATACGATGAACTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MEQLTNEFVVTDLARQIETRMNHPYLTKHEVVPAVDMLLLRWMVEMIDLESIEHRQLVMATYFAHQALDLHDQVNSSPNG SLARQLKVLAGDFASAQFYKILTDFPSSYSDRFGQSVQRVNAAKCTLLLEKNVSMNVWLEANVGLIQTLSELIEQPYLTT SGKRMIEKKATALRQDQKEQLTTLLAHAVA
Sequences:
>Translated_190_residues MEQLTNEFVVTDLARQIETRMNHPYLTKHEVVPAVDMLLLRWMVEMIDLESIEHRQLVMATYFAHQALDLHDQVNSSPNG SLARQLKVLAGDFASAQFYKILTDFPSSYSDRFGQSVQRVNAAKCTLLLEKNVSMNVWLEANVGLIQTLSELIEQPYLTT SGKRMIEKKATALRQDQKEQLTTLLAHAVA >Mature_190_residues MEQLTNEFVVTDLARQIETRMNHPYLTKHEVVPAVDMLLLRWMVEMIDLESIEHRQLVMATYFAHQALDLHDQVNSSPNG SLARQLKVLAGDFASAQFYKILTDFPSSYSDRFGQSVQRVNAAKCTLLLEKNVSMNVWLEANVGLIQTLSELIEQPYLTT SGKRMIEKKATALRQDQKEQLTTLLAHAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21605; Mature: 21605
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLTNEFVVTDLARQIETRMNHPYLTKHEVVPAVDMLLLRWMVEMIDLESIEHRQLVMA CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYFAHQALDLHDQVNSSPNGSLARQLKVLAGDFASAQFYKILTDFPSSYSDRFGQSVQRV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH NAAKCTLLLEKNVSMNVWLEANVGLIQTLSELIEQPYLTTSGKRMIEKKATALRQDQKEQ HHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LTTLLAHAVA HHHHHHHHCC >Mature Secondary Structure MEQLTNEFVVTDLARQIETRMNHPYLTKHEVVPAVDMLLLRWMVEMIDLESIEHRQLVMA CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYFAHQALDLHDQVNSSPNGSLARQLKVLAGDFASAQFYKILTDFPSSYSDRFGQSVQRV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH NAAKCTLLLEKNVSMNVWLEANVGLIQTLSELIEQPYLTTSGKRMIEKKATALRQDQKEQ HHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LTTLLAHAVA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA